RNA–Protein interactions for RNA: ENST00000534042.5

CAPRIN1-216, Transcript of cell cycle associated protein 1, humanhuman

TSL 5

Gene CAPRIN1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-216ENST00000534042 CAPN6Q9Y6Q1 641 aa16.11■□□□□ 0.17
CAPRIN1-216ENST00000534042 LOC105369274A0A096LPK9 316 aa16.1■□□□□ 0.17
CAPRIN1-216ENST00000534042 LOC102723532A0A0G2JNH3 316 aa16.1■□□□□ 0.17
CAPRIN1-216ENST00000534042 KLHL18O94889 574 aa16.1■□□□□ 0.17
CAPRIN1-216ENST00000534042 MED26O95402 600 aa16.1■□□□□ 0.17
CAPRIN1-216ENST00000534042 EIF2S1P05198 315 aaKnown RBP16.1■□□□□ 0.17
CAPRIN1-216ENST00000534042 ZGLP1P0C6A0 271 aa16.1■□□□□ 0.17
CAPRIN1-216ENST00000534042 RPS3P23396 243 aaKnown RBP eCLIP16.1■□□□□ 0.175e-7■■■□□ 15.8
CAPRIN1-216ENST00000534042 CCNFP41002 786 aa16.1■□□□□ 0.17
CAPRIN1-216ENST00000534042 EIF3BP55884 814 aaKnown RBP16.1■□□□□ 0.17
CAPRIN1-216ENST00000534042 NAA25Q14CX7 972 aa16.1■□□□□ 0.17
CAPRIN1-216ENST00000534042 MUM1Q2TAK8 710 aa16.1■□□□□ 0.17
CAPRIN1-216ENST00000534042 CNSTQ6PJW8 725 aa16.1■□□□□ 0.17
CAPRIN1-216ENST00000534042 SLC13A5Q86YT5 568 aaPredicted RBP16.1■□□□□ 0.17
CAPRIN1-216ENST00000534042 OR4N4Q8N0Y3 316 aa16.1■□□□□ 0.17
CAPRIN1-216ENST00000534042 OTUD6BQ8N6M0 293 aa16.1■□□□□ 0.17
CAPRIN1-216ENST00000534042 OR2A1Q8NGT9 310 aa16.1■□□□□ 0.17
CAPRIN1-216ENST00000534042 ZNF160Q9HCG1 818 aa16.1■□□□□ 0.17
CAPRIN1-216ENST00000534042 C3orf18Q9UK00 162 aa16.1■□□□□ 0.17
CAPRIN1-216ENST00000534042 RUVBL2Q9Y230 463 aaKnown RBP16.1■□□□□ 0.17
CAPRIN1-216ENST00000534042 KRT87PA6NCN2 255 aa16.09■□□□□ 0.17
CAPRIN1-216ENST00000534042 ERVK-10P10266 1014 aa16.09■□□□□ 0.17
CAPRIN1-216ENST00000534042 FBLP22087 321 aaKnown RBP16.09■□□□□ 0.17
CAPRIN1-216ENST00000534042 CMPK1P30085 196 aa16.09■□□□□ 0.17
CAPRIN1-216ENST00000534042 CRADDP78560 199 aa16.09■□□□□ 0.17
CAPRIN1-216ENST00000534042 RNF44Q7L0R7 432 aa16.09■□□□□ 0.17
CAPRIN1-216ENST00000534042 SLC34A3Q8N130 599 aa16.09■□□□□ 0.17
CAPRIN1-216ENST00000534042 CATSPER1Q8NEC5 780 aa16.09■□□□□ 0.17
CAPRIN1-216ENST00000534042 C8orf44Q96CB5 159 aa16.09■□□□□ 0.17
CAPRIN1-216ENST00000534042 ZFYVE21Q9BQ24 234 aa16.09■□□□□ 0.17
CAPRIN1-216ENST00000534042 MESP1Q9BRJ9 268 aa16.09■□□□□ 0.17
CAPRIN1-216ENST00000534042 TREX1Q9NSU2 369 aa16.09■□□□□ 0.17
CAPRIN1-216ENST00000534042 SPATA7Q9P0W8 599 aa16.09■□□□□ 0.17
CAPRIN1-216ENST00000534042 STOX2Q9P2F5 926 aaPredicted RBP16.09■□□□□ 0.17
CAPRIN1-216ENST00000534042 CDC14AQ9UNH5 594 aa16.09■□□□□ 0.17
CAPRIN1-216ENST00000534042 CRYBG3Q68DQ2 2970 aa16.09■□□□□ 0.17
CAPRIN1-216ENST00000534042 CELSR2Q9HCU4 2923 aa16.08■□□□□ 0.16
CAPRIN1-216ENST00000534042 A0A1W2PPV9 198 aa16.08■□□□□ 0.16
CAPRIN1-216ENST00000534042 NRP2O60462 931 aa16.08■□□□□ 0.16
CAPRIN1-216ENST00000534042 USP1O94782 785 aa16.08■□□□□ 0.16
CAPRIN1-216ENST00000534042 ZSCAN5DPP0CG00 497 aa16.08■□□□□ 0.16
CAPRIN1-216ENST00000534042 NMBRP28336 390 aa16.08■□□□□ 0.16
CAPRIN1-216ENST00000534042 RPL22P35268 128 aaKnown RBP16.08■□□□□ 0.16
CAPRIN1-216ENST00000534042 ARG2P78540 354 aa16.08■□□□□ 0.16
CAPRIN1-216ENST00000534042 VWA2Q5GFL6 755 aa16.08■□□□□ 0.16
CAPRIN1-216ENST00000534042 C1QL3Q5VWW1 255 aa16.08■□□□□ 0.16
CAPRIN1-216ENST00000534042 ATG9BQ674R7 924 aa16.08■□□□□ 0.16
CAPRIN1-216ENST00000534042 RPUSD3Q6P087 351 aaKnown RBP16.08■□□□□ 0.16
CAPRIN1-216ENST00000534042 FBXO42Q6P3S6 717 aa16.08■□□□□ 0.16
CAPRIN1-216ENST00000534042 TICAM1Q8IUC6 712 aa16.08■□□□□ 0.16
CAPRIN1-216ENST00000534042 TMEM139Q8IV31 216 aa16.08■□□□□ 0.16
CAPRIN1-216ENST00000534042 KBTBD2Q8IY47 623 aa16.08■□□□□ 0.16
CAPRIN1-216ENST00000534042 RNF10Q8N5U6 811 aaKnown RBP16.08■□□□□ 0.16
CAPRIN1-216ENST00000534042 BCORP1Q8N888 145 aa16.08■□□□□ 0.16
CAPRIN1-216ENST00000534042 OR1N1Q8NGS0 311 aa16.08■□□□□ 0.16
CAPRIN1-216ENST00000534042 CABS1Q96KC9 395 aa16.08■□□□□ 0.16
CAPRIN1-216ENST00000534042 DPH7Q9BTV6 452 aa16.08■□□□□ 0.16
CAPRIN1-216ENST00000534042 ACAT2Q9BWD1 397 aa16.08■□□□□ 0.16
CAPRIN1-216ENST00000534042 IL22Q9GZX6 179 aa16.08■□□□□ 0.16
CAPRIN1-216ENST00000534042 EIF2B3Q9NR50 452 aaKnown RBP16.08■□□□□ 0.16
CAPRIN1-216ENST00000534042 OLAHQ9NV23 265 aa16.08■□□□□ 0.16
CAPRIN1-216ENST00000534042 BFARQ9NZS9 450 aa16.08■□□□□ 0.16
CAPRIN1-216ENST00000534042 TSR3Q9UJK0 312 aaKnown RBP16.08■□□□□ 0.16
CAPRIN1-216ENST00000534042 IGLV3-12A0A075B6K2 115 aa16.07■□□□□ 0.16
CAPRIN1-216ENST00000534042 NSG1A0A0A6YYJ2 146 aa16.07■□□□□ 0.16
CAPRIN1-216ENST00000534042 A0A1B0GUH1 482 aa16.07■□□□□ 0.16
CAPRIN1-216ENST00000534042 DYTNA2CJ06 578 aa16.07■□□□□ 0.16
CAPRIN1-216ENST00000534042 OR2A25A4D2G3 310 aa16.07■□□□□ 0.16
CAPRIN1-216ENST00000534042 H0YGG7 62 aa16.07■□□□□ 0.16
CAPRIN1-216ENST00000534042 AP3B1O00203 1094 aa16.07■□□□□ 0.16
CAPRIN1-216ENST00000534042 CXCR2P25025 360 aa16.07■□□□□ 0.16
CAPRIN1-216ENST00000534042 FMO4P31512 558 aa16.07■□□□□ 0.16
CAPRIN1-216ENST00000534042 NPY2RP49146 381 aa16.07■□□□□ 0.16
CAPRIN1-216ENST00000534042 EMP2P54851 167 aa16.07■□□□□ 0.16
CAPRIN1-216ENST00000534042 EMP3P54852 163 aa16.07■□□□□ 0.16
CAPRIN1-216ENST00000534042 ARF3P61204 181 aaPredicted RBP16.07■□□□□ 0.16
CAPRIN1-216ENST00000534042 FASTKQ14296 549 aaKnown RBP16.07■□□□□ 0.16
CAPRIN1-216ENST00000534042 ZRSR2Q15696 482 aaKnown RBP16.07■□□□□ 0.16
CAPRIN1-216ENST00000534042 PRTGQ2VWP7 1150 aa16.07■□□□□ 0.16
CAPRIN1-216ENST00000534042 CTSL3PQ5NE16 218 aa16.07■□□□□ 0.16
CAPRIN1-216ENST00000534042 NDUFAF7Q7L592 441 aa16.07■□□□□ 0.16
CAPRIN1-216ENST00000534042 SDCCAG8Q86SQ7 713 aaPredicted RBP16.07■□□□□ 0.16
CAPRIN1-216ENST00000534042 LAPTM4BQ86VI4 370 aa16.07■□□□□ 0.16
CAPRIN1-216ENST00000534042 MAGEB10Q96LZ2 347 aaPredicted RBP16.07■□□□□ 0.16
CAPRIN1-216ENST00000534042 C10orf90Q96M02 699 aa16.07■□□□□ 0.16
CAPRIN1-216ENST00000534042 SLX1AQ9BQ83 275 aa16.07■□□□□ 0.16
CAPRIN1-216ENST00000534042 YIPF2Q9BWQ6 316 aa16.07■□□□□ 0.16
CAPRIN1-216ENST00000534042 MRPS30Q9NP92 439 aaKnown RBP16.07■□□□□ 0.16
CAPRIN1-216ENST00000534042 PTGFRNQ9P2B2 879 aa16.07■□□□□ 0.16
CAPRIN1-216ENST00000534042 TRPC4Q9UBN4 977 aa16.07■□□□□ 0.16
CAPRIN1-216ENST00000534042 PCNX1Q96RV3 2341 aa16.07■□□□□ 0.16
CAPRIN1-216ENST00000534042 PFDN6O15212 129 aa16.06■□□□□ 0.16
CAPRIN1-216ENST00000534042 PRPF4O43172 522 aaKnown RBP eCLIP16.06■□□□□ 0.16
CAPRIN1-216ENST00000534042 ZG16O60844 167 aa16.06■□□□□ 0.16
CAPRIN1-216ENST00000534042 VPS26AO75436 327 aa16.06■□□□□ 0.16
CAPRIN1-216ENST00000534042 JRKO75564 520 aa16.06■□□□□ 0.16
CAPRIN1-216ENST00000534042 VAPBO95292 243 aa16.06■□□□□ 0.16
CAPRIN1-216ENST00000534042 MATN4O95460 622 aa16.06■□□□□ 0.16
CAPRIN1-216ENST00000534042 STSP08842 583 aa16.06■□□□□ 0.16
CAPRIN1-216ENST00000534042 FDXRP22570 491 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms