RNA–Protein interactions for RNA: ENST00000533499.1

NXF1-216, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-216ENST00000533499 C17orf64Q86WR6 236 aa16.82■□□□□ 0.28
NXF1-216ENST00000533499 TMPRSS12Q86WS5 348 aa16.82■□□□□ 0.28
NXF1-216ENST00000533499 GALNT15Q8N3T1 639 aa16.82■□□□□ 0.28
NXF1-216ENST00000533499 ANKRD42Q8N9B4 389 aa16.82■□□□□ 0.28
NXF1-216ENST00000533499 PPP4R1Q8TF05 950 aa16.82■□□□□ 0.28
NXF1-216ENST00000533499 HAUS8Q9BT25 410 aa16.82■□□□□ 0.28
NXF1-216ENST00000533499 DPH7Q9BTV6 452 aa16.82■□□□□ 0.28
NXF1-216ENST00000533499 CD244Q9BZW8 370 aa16.82■□□□□ 0.28
NXF1-216ENST00000533499 ACSS2Q9NR19 701 aa16.82■□□□□ 0.28
NXF1-216ENST00000533499 C1GALT1Q9NS00 363 aa16.82■□□□□ 0.28
NXF1-216ENST00000533499 DNAJC11Q9NVH1 559 aa16.82■□□□□ 0.28
NXF1-216ENST00000533499 PTBP2Q9UKA9 531 aaKnown RBP16.82■□□□□ 0.28
NXF1-216ENST00000533499 PLLPQ9Y342 182 aa16.82■□□□□ 0.28
NXF1-216ENST00000533499 KNTC1P50748 2209 aa16.81■□□□□ 0.28
NXF1-216ENST00000533499 KIF26BQ2KJY2 2108 aa16.81■□□□□ 0.28
NXF1-216ENST00000533499 A8MT66 165 aa16.81■□□□□ 0.28
NXF1-216ENST00000533499 DLX3O60479 287 aa16.81■□□□□ 0.28
NXF1-216ENST00000533499 PRAMEF10O60809 474 aa16.81■□□□□ 0.28
NXF1-216ENST00000533499 SIX3O95343 332 aaPredicted RBP16.81■□□□□ 0.28
NXF1-216ENST00000533499 ZBTB11O95625 1053 aaPredicted RBP16.81■□□□□ 0.28
NXF1-216ENST00000533499 SBK3P0C264 359 aa16.81■□□□□ 0.28
NXF1-216ENST00000533499 CDH1P12830 882 aa16.81■□□□□ 0.28
NXF1-216ENST00000533499 CPA3P15088 417 aa16.81■□□□□ 0.28
NXF1-216ENST00000533499 ATP5F1P24539 256 aaPredicted RBP16.81■□□□□ 0.28
NXF1-216ENST00000533499 GRIA3P42263 894 aa16.81■□□□□ 0.28
NXF1-216ENST00000533499 MLLT3P42568 568 aaPredicted RBP16.81■□□□□ 0.28
NXF1-216ENST00000533499 PDX1P52945 283 aa16.81■□□□□ 0.28
NXF1-216ENST00000533499 ZFP36L1Q07352 338 aaKnown RBP16.81■□□□□ 0.28
NXF1-216ENST00000533499 FOXM1Q08050 763 aa16.81■□□□□ 0.28
NXF1-216ENST00000533499 TRA2AQ13595 282 aaKnown RBP eCLIP16.81■□□□□ 0.28
NXF1-216ENST00000533499 KCNAB1Q14722 419 aa16.81■□□□□ 0.28
NXF1-216ENST00000533499 C16orf72Q14CZ0 275 aa16.81■□□□□ 0.28
NXF1-216ENST00000533499 FIGLAQ6QHK4 219 aa16.81■□□□□ 0.28
NXF1-216ENST00000533499 LCTLQ6UWM7 567 aa16.81■□□□□ 0.28
NXF1-216ENST00000533499 PRSS42Q7Z5A4 293 aa16.81■□□□□ 0.28
NXF1-216ENST00000533499 TEX9Q8N6V9 391 aa16.81■□□□□ 0.28
NXF1-216ENST00000533499 FLVCR1-AS1Q8TAF5 88 aa16.81■□□□□ 0.28
NXF1-216ENST00000533499 N4BP2L2Q92802 583 aaPredicted RBP16.81■□□□□ 0.28
NXF1-216ENST00000533499 ATP6V1G3Q96LB4 118 aa16.81■□□□□ 0.28
NXF1-216ENST00000533499 TRAPPC9Q96Q05 1148 aa16.81■□□□□ 0.28
NXF1-216ENST00000533499 PAIP2Q9BPZ3 127 aaKnown RBP16.81■□□□□ 0.28
NXF1-216ENST00000533499 SGPP1Q9BX95 441 aa16.81■□□□□ 0.28
NXF1-216ENST00000533499 CUEDC1Q9NWM3 386 aaPredicted RBP16.81■□□□□ 0.28
NXF1-216ENST00000533499 MKS1Q9NXB0 559 aa16.81■□□□□ 0.28
NXF1-216ENST00000533499 MID2Q9UJV3 735 aa16.81■□□□□ 0.28
NXF1-216ENST00000533499 SH2B3Q9UQQ2 575 aa16.81■□□□□ 0.28
NXF1-216ENST00000533499 ASB1Q9Y576 335 aa16.81■□□□□ 0.28
NXF1-216ENST00000533499 KCNE2Q9Y6J6 123 aa16.81■□□□□ 0.28
NXF1-216ENST00000533499 EFCAB7A8K855 629 aa16.8■□□□□ 0.28
NXF1-216ENST00000533499 H7BY64 318 aa16.8■□□□□ 0.28
NXF1-216ENST00000533499 CLGNO14967 610 aa16.8■□□□□ 0.28
NXF1-216ENST00000533499 PRICKLE3O43900 615 aaPredicted RBP16.8■□□□□ 0.28
NXF1-216ENST00000533499 HGFP14210 728 aa16.8■□□□□ 0.28
NXF1-216ENST00000533499 NPPBP16860 134 aa16.8■□□□□ 0.28
NXF1-216ENST00000533499 CCKBRP32239 447 aa16.8■□□□□ 0.28
NXF1-216ENST00000533499 HPDP32754 393 aaPredicted RBP16.8■□□□□ 0.28
NXF1-216ENST00000533499 SLC6A12P48065 614 aa16.8■□□□□ 0.28
NXF1-216ENST00000533499 ABATP80404 500 aa16.8■□□□□ 0.28
NXF1-216ENST00000533499 PRDX1Q06830 199 aaKnown RBP16.8■□□□□ 0.28
NXF1-216ENST00000533499 CDC16Q13042 620 aa16.8■□□□□ 0.28
NXF1-216ENST00000533499 PDK4Q16654 411 aa16.8■□□□□ 0.28
NXF1-216ENST00000533499 C3orf38Q5JPI3 329 aa16.8■□□□□ 0.28
NXF1-216ENST00000533499 TMTC4Q5T4D3 741 aa16.8■□□□□ 0.28
NXF1-216ENST00000533499 ZYG11AQ6WRX3 759 aa16.8■□□□□ 0.28
NXF1-216ENST00000533499 TMPRSS11BQ86T26 416 aa16.8■□□□□ 0.28
NXF1-216ENST00000533499 TMEM151AQ8N4L1 468 aa16.8■□□□□ 0.28
NXF1-216ENST00000533499 CCNYL1Q8N7R7 359 aa16.8■□□□□ 0.28
NXF1-216ENST00000533499 DCBLD1Q8N8Z6 715 aa16.8■□□□□ 0.28
NXF1-216ENST00000533499 C19orf47Q8N9M1 422 aaKnown RBP16.8■□□□□ 0.28
NXF1-216ENST00000533499 AGBL5Q8NDL9 886 aa16.8■□□□□ 0.28
NXF1-216ENST00000533499 MGARPQ8TDB4 240 aa16.8■□□□□ 0.28
NXF1-216ENST00000533499 SLC5A11Q8WWX8 675 aa16.8■□□□□ 0.28
NXF1-216ENST00000533499 ATP6V1E2Q96A05 226 aa16.8■□□□□ 0.28
NXF1-216ENST00000533499 PRAP1Q96NZ9 151 aa16.8■□□□□ 0.28
NXF1-216ENST00000533499 OR4K3Q96R72 315 aa16.8■□□□□ 0.28
NXF1-216ENST00000533499 CMKLR1Q99788 373 aa16.8■□□□□ 0.28
NXF1-216ENST00000533499 PDE7BQ9NP56 450 aa16.8■□□□□ 0.28
NXF1-216ENST00000533499 MLXIPLQ9NP71 852 aa16.8■□□□□ 0.28
NXF1-216ENST00000533499 SLC6A20Q9NP91 592 aa16.8■□□□□ 0.28
NXF1-216ENST00000533499 IRAK4Q9NWZ3 460 aa16.8■□□□□ 0.28
NXF1-216ENST00000533499 LOXL2Q9Y4K0 774 aa16.8■□□□□ 0.28
NXF1-216ENST00000533499 TNPO3Q9Y5L0 923 aaKnown RBP16.8■□□□□ 0.28
NXF1-216ENST00000533499 K7EPI3 171 aa16.79■□□□□ 0.28
NXF1-216ENST00000533499 DYNC1I1O14576 645 aa16.79■□□□□ 0.28
NXF1-216ENST00000533499 TOX3O15405 576 aaPredicted RBP16.79■□□□□ 0.28
NXF1-216ENST00000533499 TYROBPO43914 113 aa16.79■□□□□ 0.28
NXF1-216ENST00000533499 JMJD7P0C870 316 aa16.79■□□□□ 0.28
NXF1-216ENST00000533499 EBLN1P0CF75 366 aa16.79■□□□□ 0.28
NXF1-216ENST00000533499 SPINK2P20155 84 aa16.79■□□□□ 0.28
NXF1-216ENST00000533499 GGT5P36269 586 aa16.79■□□□□ 0.28
NXF1-216ENST00000533499 MAPK10P53779 464 aa16.79■□□□□ 0.28
NXF1-216ENST00000533499 SH3BP2P78314 561 aa16.79■□□□□ 0.28
NXF1-216ENST00000533499 HSD11B2P80365 405 aa16.79■□□□□ 0.28
NXF1-216ENST00000533499 RBBP7Q16576 425 aa16.79■□□□□ 0.28
NXF1-216ENST00000533499 DEFB110Q30KQ9 67 aa16.79■□□□□ 0.28
NXF1-216ENST00000533499 TTMPQ5BVD1 217 aa16.79■□□□□ 0.28
NXF1-216ENST00000533499 TNFAIP8L3Q5GJ75 292 aa16.79■□□□□ 0.28
NXF1-216ENST00000533499 RAB11FIP2Q7L804 512 aa16.79■□□□□ 0.28
NXF1-216ENST00000533499 TMPRSS7Q7RTY8 843 aa16.79■□□□□ 0.28
NXF1-216ENST00000533499 LRRC70Q7Z2Q7 622 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms