RNA–Protein interactions for RNA: ENST00000533229.1

CACNA1E-208, Transcript of calcium voltage-gated channel subunit alpha1 E, humanhuman

TSL 1 (best)

Gene CACNA1E, Length 2,142 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1E-208ENST00000533229 LRRC3BQ96PB8 259 aa14.87□□□□□ -0.03
CACNA1E-208ENST00000533229 PHF12Q96QT6 1004 aa14.87□□□□□ -0.03
CACNA1E-208ENST00000533229 MBOAT4Q96T53 435 aa14.87□□□□□ -0.03
CACNA1E-208ENST00000533229 CXXC1Q9P0U4 656 aaPredicted RBP14.87□□□□□ -0.03
CACNA1E-208ENST00000533229 U3KQV3 271 aa14.87□□□□□ -0.03
CACNA1E-208ENST00000533229 TSPAN11A1L157 253 aa14.87□□□□□ -0.03
CACNA1E-208ENST00000533229 SERTM1A2A2V5 107 aa14.87□□□□□ -0.03
CACNA1E-208ENST00000533229 TMX2-CTNND1H3BSU7 103 aa14.87□□□□□ -0.03
CACNA1E-208ENST00000533229 GNGT2O14610 69 aa14.87□□□□□ -0.03
CACNA1E-208ENST00000533229 AP2A2O94973 939 aa14.87□□□□□ -0.03
CACNA1E-208ENST00000533229 ETHE1O95571 254 aa14.87□□□□□ -0.03
CACNA1E-208ENST00000533229 PDHA2P29803 388 aa14.87□□□□□ -0.03
CACNA1E-208ENST00000533229 KIR3DL1P43629 444 aa14.87□□□□□ -0.03
CACNA1E-208ENST00000533229 HLCSP50747 726 aa14.87□□□□□ -0.03
CACNA1E-208ENST00000533229 METAP1P53582 386 aa14.87□□□□□ -0.03
CACNA1E-208ENST00000533229 WNT3P56703 355 aa14.87□□□□□ -0.03
CACNA1E-208ENST00000533229 ESRRGP62508 458 aa14.87□□□□□ -0.03
CACNA1E-208ENST00000533229 MESP2Q0VG99 397 aa14.87□□□□□ -0.03
CACNA1E-208ENST00000533229 MTAPQ13126 283 aa14.87□□□□□ -0.03
CACNA1E-208ENST00000533229 NAE1Q13564 534 aa14.87□□□□□ -0.03
CACNA1E-208ENST00000533229 DDX39BQ13838 428 aaKnown RBP14.87□□□□□ -0.03
CACNA1E-208ENST00000533229 DOC2AQ14183 400 aa14.87□□□□□ -0.03
CACNA1E-208ENST00000533229 RAB39AQ14964 217 aa14.87□□□□□ -0.03
CACNA1E-208ENST00000533229 SPESP1Q6UW49 350 aa14.87□□□□□ -0.03
CACNA1E-208ENST00000533229 SPRED2Q7Z698 418 aa14.87□□□□□ -0.03
CACNA1E-208ENST00000533229 RAVER1Q8IY67 606 aaKnown RBP14.87□□□□□ -0.03
CACNA1E-208ENST00000533229 SGCDQ92629 289 aa14.87□□□□□ -0.03
CACNA1E-208ENST00000533229 ZSCAN5AQ9BUG6 496 aa14.87□□□□□ -0.03
CACNA1E-208ENST00000533229 REXO4Q9GZR2 422 aaKnown RBP14.87□□□□□ -0.03
CACNA1E-208ENST00000533229 POLR1BQ9H9Y6 1135 aa14.87□□□□□ -0.03
CACNA1E-208ENST00000533229 CXorf21Q9HAI6 301 aa14.87□□□□□ -0.03
CACNA1E-208ENST00000533229 FAM118AQ9NWS6 357 aa14.87□□□□□ -0.03
CACNA1E-208ENST00000533229 GULP1Q9UBP9 304 aa14.87□□□□□ -0.03
CACNA1E-208ENST00000533229 IL36AQ9UHA7 158 aa14.87□□□□□ -0.03
CACNA1E-208ENST00000533229 BTBD3Q9Y2F9 522 aa14.87□□□□□ -0.03
CACNA1E-208ENST00000533229 PCDHGA8Q9Y5G5 932 aa14.87□□□□□ -0.03
CACNA1E-208ENST00000533229 WNT9AO14904 365 aa14.86□□□□□ -0.03
CACNA1E-208ENST00000533229 NPC1O15118 1278 aa14.86□□□□□ -0.03
CACNA1E-208ENST00000533229 SH3BGRLO75368 114 aa14.86□□□□□ -0.03
CACNA1E-208ENST00000533229 FTH1P02794 183 aa14.86□□□□□ -0.03
CACNA1E-208ENST00000533229 DDX6P26196 483 aaKnown RBP eCLIP14.86□□□□□ -0.03
CACNA1E-208ENST00000533229 MAPK1P28482 360 aa14.86□□□□□ -0.03
CACNA1E-208ENST00000533229 DCTP40126 519 aa14.86□□□□□ -0.03
CACNA1E-208ENST00000533229 BDKRB1P46663 353 aa14.86□□□□□ -0.03
CACNA1E-208ENST00000533229 ABHD18Q0P651 414 aa14.86□□□□□ -0.03
CACNA1E-208ENST00000533229 ZNF697Q5TEC3 545 aa14.86□□□□□ -0.03
CACNA1E-208ENST00000533229 LIPJQ5W064 366 aa14.86□□□□□ -0.03
CACNA1E-208ENST00000533229 ANKRD26P1Q6NSI1 321 aa14.86□□□□□ -0.03
CACNA1E-208ENST00000533229 AGTRAPQ6RW13 159 aa14.86□□□□□ -0.03
CACNA1E-208ENST00000533229 SYT12Q8IV01 421 aa14.86□□□□□ -0.03
CACNA1E-208ENST00000533229 HOMEZQ8IX15 550 aa14.86□□□□□ -0.03
CACNA1E-208ENST00000533229 ZNF784Q8NCA9 323 aaPredicted RBP14.86□□□□□ -0.03
CACNA1E-208ENST00000533229 ING5Q8WYH8 240 aa14.86□□□□□ -0.03
CACNA1E-208ENST00000533229 C12orf43Q96C57 262 aaKnown RBP14.86□□□□□ -0.03
CACNA1E-208ENST00000533229 DTNBP1Q96EV8 351 aa14.86□□□□□ -0.03
CACNA1E-208ENST00000533229 C11orf24Q96F05 449 aaPredicted RBP14.86□□□□□ -0.03
CACNA1E-208ENST00000533229 MED8Q96G25 268 aa14.86□□□□□ -0.03
CACNA1E-208ENST00000533229 REXO5Q96IC2 774 aaKnown RBP14.86□□□□□ -0.03
CACNA1E-208ENST00000533229 STOX2Q9P2F5 926 aaPredicted RBP14.86□□□□□ -0.03
CACNA1E-208ENST00000533229 ATXN10Q9UBB4 475 aa14.86□□□□□ -0.03
CACNA1E-208ENST00000533229 VPS29Q9UBQ0 182 aa14.86□□□□□ -0.03
CACNA1E-208ENST00000533229 AP3M1Q9Y2T2 418 aa14.86□□□□□ -0.03
CACNA1E-208ENST00000533229 C5orf42Q9H799 3197 aa14.86□□□□□ -0.03
CACNA1E-208ENST00000533229 SLC16A8O95907 504 aa14.86□□□□□ -0.03
CACNA1E-208ENST00000533229 HPRP00739 348 aa14.86□□□□□ -0.03
CACNA1E-208ENST00000533229 VAC14Q08AM6 782 aa14.86□□□□□ -0.03
CACNA1E-208ENST00000533229 TMEM115Q12893 351 aaPredicted RBP14.86□□□□□ -0.03
CACNA1E-208ENST00000533229 SPIDRQ14159 915 aa14.86□□□□□ -0.03
CACNA1E-208ENST00000533229 ARHGAP15Q53QZ3 475 aa14.86□□□□□ -0.03
CACNA1E-208ENST00000533229 ZNF805Q5CZA5 627 aa14.86□□□□□ -0.03
CACNA1E-208ENST00000533229 LIPIQ6XZB0 460 aa14.86□□□□□ -0.03
CACNA1E-208ENST00000533229 CLECL1Q8IZS7 167 aa14.86□□□□□ -0.03
CACNA1E-208ENST00000533229 PJA1Q8NG27 643 aa14.86□□□□□ -0.03
CACNA1E-208ENST00000533229 CSGALNACT1Q8TDX6 532 aa14.86□□□□□ -0.03
CACNA1E-208ENST00000533229 GLYATL1Q969I3 302 aa14.86□□□□□ -0.03
CACNA1E-208ENST00000533229 PYURFQ96I23 114 aa14.86□□□□□ -0.03
CACNA1E-208ENST00000533229 FAM83CQ9BQN1 747 aa14.86□□□□□ -0.03
CACNA1E-208ENST00000533229 NAA50Q9GZZ1 169 aaKnown RBP14.86□□□□□ -0.03
CACNA1E-208ENST00000533229 SPATA6Q9NWH7 488 aaPredicted RBP14.86□□□□□ -0.03
CACNA1E-208ENST00000533229 VNN3Q9NY84 501 aa14.86□□□□□ -0.03
CACNA1E-208ENST00000533229 TBC1D14Q9P2M4 693 aa14.86□□□□□ -0.03
CACNA1E-208ENST00000533229 CROCCQ5TZA2 2017 aa14.85□□□□□ -0.03
CACNA1E-208ENST00000533229 SLC5A10A0PJK1 596 aa14.85□□□□□ -0.03
CACNA1E-208ENST00000533229 KIAA0355O15063 1070 aa14.85□□□□□ -0.03
CACNA1E-208ENST00000533229 ACPPP15309 386 aa14.85□□□□□ -0.03
CACNA1E-208ENST00000533229 EPCAMP16422 314 aa14.85□□□□□ -0.03
CACNA1E-208ENST00000533229 IL7RP16871 459 aa14.85□□□□□ -0.03
CACNA1E-208ENST00000533229 EFNA1P20827 205 aaPredicted RBP14.85□□□□□ -0.03
CACNA1E-208ENST00000533229 PRPS1L1P21108 318 aa14.85□□□□□ -0.03
CACNA1E-208ENST00000533229 MAP4P27816 1152 aaKnown RBP14.85□□□□□ -0.03
CACNA1E-208ENST00000533229 IMPA1P29218 277 aa14.85□□□□□ -0.03
CACNA1E-208ENST00000533229 KCNC3Q14003 757 aa14.85□□□□□ -0.03
CACNA1E-208ENST00000533229 C16orf72Q14CZ0 275 aa14.85□□□□□ -0.03
CACNA1E-208ENST00000533229 NEDD8Q15843 81 aa14.85□□□□□ -0.03
CACNA1E-208ENST00000533229 PRSS36Q5K4E3 855 aa14.85□□□□□ -0.03
CACNA1E-208ENST00000533229 DPPA4Q7L190 304 aa14.85□□□□□ -0.03
CACNA1E-208ENST00000533229 GRASPQ7Z6J2 395 aaPredicted RBP14.85□□□□□ -0.03
CACNA1E-208ENST00000533229 GALNT10Q86SR1 603 aa14.85□□□□□ -0.03
CACNA1E-208ENST00000533229 RBM23Q86U06 439 aaKnown RBP14.85□□□□□ -0.03
CACNA1E-208ENST00000533229 C12orf40Q86WS4 652 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms