RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 SHBGP04278 402 aa11.52□□□□□ -0.57
SSBP3-214ENST00000533209 SNRPAP09012 282 aaKnown RBP11.52□□□□□ -0.57
SSBP3-214ENST00000533209 ZNF28P17035 718 aa11.52□□□□□ -0.57
SSBP3-214ENST00000533209 TFEBP19484 476 aa11.52□□□□□ -0.57
SSBP3-214ENST00000533209 CD82P27701 267 aa11.52□□□□□ -0.57
SSBP3-214ENST00000533209 EIF2S3P41091 472 aaKnown RBP11.52□□□□□ -0.57
SSBP3-214ENST00000533209 ABATP80404 500 aa11.52□□□□□ -0.57
SSBP3-214ENST00000533209 TGFBIQ15582 683 aa11.52□□□□□ -0.57
SSBP3-214ENST00000533209 DEFB110Q30KQ9 67 aa11.52□□□□□ -0.57
SSBP3-214ENST00000533209 TAF1BQ53T94 588 aaPredicted RBP11.52□□□□□ -0.57
SSBP3-214ENST00000533209 PWWP2BQ6NUJ5 590 aa11.52□□□□□ -0.57
SSBP3-214ENST00000533209 EMBQ6PCB8 327 aa11.52□□□□□ -0.57
SSBP3-214ENST00000533209 FRA10AC1Q70Z53 315 aa11.52□□□□□ -0.57
SSBP3-214ENST00000533209 ISCA2Q86U28 154 aa11.52□□□□□ -0.57
SSBP3-214ENST00000533209 DTX1Q86Y01 620 aa11.52□□□□□ -0.57
SSBP3-214ENST00000533209 GPSM1Q86YR5 675 aa11.52□□□□□ -0.57
SSBP3-214ENST00000533209 ZNF248Q8NDW4 579 aa11.52□□□□□ -0.57
SSBP3-214ENST00000533209 OR8K5Q8NH50 307 aa11.52□□□□□ -0.57
SSBP3-214ENST00000533209 ATL1Q8WXF7 558 aa11.52□□□□□ -0.57
SSBP3-214ENST00000533209 CAVIN3Q969G5 261 aa11.52□□□□□ -0.57
SSBP3-214ENST00000533209 ZUFSPQ96AP4 578 aa11.52□□□□□ -0.57
SSBP3-214ENST00000533209 RNF31Q96EP0 1072 aa11.52□□□□□ -0.57
SSBP3-214ENST00000533209 MED8Q96G25 268 aa11.52□□□□□ -0.57
SSBP3-214ENST00000533209 FCRL4Q96PJ5 515 aa11.52□□□□□ -0.57
SSBP3-214ENST00000533209 CCDC77Q9BR77 488 aa11.52□□□□□ -0.57
SSBP3-214ENST00000533209 DPH7Q9BTV6 452 aa11.52□□□□□ -0.57
SSBP3-214ENST00000533209 ALG9Q9H6U8 611 aa11.52□□□□□ -0.57
SSBP3-214ENST00000533209 MRPS30Q9NP92 439 aaKnown RBP11.52□□□□□ -0.57
SSBP3-214ENST00000533209 RAB21Q9UL25 225 aa11.52□□□□□ -0.57
SSBP3-214ENST00000533209 ZMIZ1Q9ULJ6 1067 aa11.52□□□□□ -0.57
SSBP3-214ENST00000533209 SH2B3Q9UQQ2 575 aa11.52□□□□□ -0.57
SSBP3-214ENST00000533209 TMEM184BQ9Y519 407 aaPredicted RBP11.52□□□□□ -0.57
SSBP3-214ENST00000533209 RFPL1O75677 317 aa11.51□□□□□ -0.57
SSBP3-214ENST00000533209 STK17BO94768 372 aa11.51□□□□□ -0.57
SSBP3-214ENST00000533209 KLHL2O95198 593 aa11.51□□□□□ -0.57
SSBP3-214ENST00000533209 CCNDBP1O95273 360 aa11.51□□□□□ -0.57
SSBP3-214ENST00000533209 DLGAP3O95886 979 aa11.51□□□□□ -0.57
SSBP3-214ENST00000533209 CTSBP07858 339 aa11.51□□□□□ -0.57
SSBP3-214ENST00000533209 ANXA5P08758 320 aa11.51□□□□□ -0.57
SSBP3-214ENST00000533209 LIPCP11150 499 aa11.51□□□□□ -0.57
SSBP3-214ENST00000533209 NPPBP16860 134 aa11.51□□□□□ -0.57
SSBP3-214ENST00000533209 CCND1P24385 295 aa11.51□□□□□ -0.57
SSBP3-214ENST00000533209 CLN3Q13286 438 aa11.51□□□□□ -0.57
SSBP3-214ENST00000533209 TGIF1Q15583 401 aa11.51□□□□□ -0.57
SSBP3-214ENST00000533209 FAM83EQ2M2I3 478 aa11.51□□□□□ -0.57
SSBP3-214ENST00000533209 C18orf21Q32NC0 220 aaPredicted RBP11.51□□□□□ -0.57
SSBP3-214ENST00000533209 THEMIS2Q5TEJ8 643 aa11.51□□□□□ -0.57
SSBP3-214ENST00000533209 PRAMEF13Q5VWM6 474 aa11.51□□□□□ -0.57
SSBP3-214ENST00000533209 ZNF425Q6IV72 752 aa11.51□□□□□ -0.57
SSBP3-214ENST00000533209 CAPN13Q6MZZ7 669 aaPredicted RBP11.51□□□□□ -0.57
SSBP3-214ENST00000533209 TIFABQ6ZNK6 161 aa11.51□□□□□ -0.57
SSBP3-214ENST00000533209 PAQR7Q86WK9 346 aa11.51□□□□□ -0.57
SSBP3-214ENST00000533209 PLD6Q8N2A8 252 aaKnown RBP11.51□□□□□ -0.57
SSBP3-214ENST00000533209 KCNE4Q8WWG9 221 aa11.51□□□□□ -0.57
SSBP3-214ENST00000533209 ALKBH8Q96BT7 664 aaKnown RBP11.51□□□□□ -0.57
SSBP3-214ENST00000533209 PYCR2Q96C36 320 aa11.51□□□□□ -0.57
SSBP3-214ENST00000533209 RHBDF1Q96CC6 855 aa11.51□□□□□ -0.57
SSBP3-214ENST00000533209 NAF1Q96HR8 494 aaKnown RBP11.51□□□□□ -0.57
SSBP3-214ENST00000533209 GPR78Q96P69 363 aa11.51□□□□□ -0.57
SSBP3-214ENST00000533209 OR4K3Q96R72 315 aa11.51□□□□□ -0.57
SSBP3-214ENST00000533209 ATOH8Q96SQ7 321 aa11.51□□□□□ -0.57
SSBP3-214ENST00000533209 EGFL8Q99944 293 aa11.51□□□□□ -0.57
SSBP3-214ENST00000533209 PLCD4Q9BRC7 762 aa11.51□□□□□ -0.57
SSBP3-214ENST00000533209 ULBP3Q9BZM4 244 aa11.51□□□□□ -0.57
SSBP3-214ENST00000533209 PCBD2Q9H0N5 130 aa11.51□□□□□ -0.57
SSBP3-214ENST00000533209 VPS11Q9H270 941 aa11.51□□□□□ -0.57
SSBP3-214ENST00000533209 FANCEQ9HB96 536 aa11.51□□□□□ -0.57
SSBP3-214ENST00000533209 CUEDC1Q9NWM3 386 aaPredicted RBP11.51□□□□□ -0.57
SSBP3-214ENST00000533209 EURLQ9NYK6 297 aa11.51□□□□□ -0.57
SSBP3-214ENST00000533209 ANKMY1Q9P2S6 941 aa11.51□□□□□ -0.57
SSBP3-214ENST00000533209 PSMC3IPQ9P2W1 217 aaPredicted RBP11.51□□□□□ -0.57
SSBP3-214ENST00000533209 PILRAQ9UKJ1 303 aa11.51□□□□□ -0.57
SSBP3-214ENST00000533209 RNF112Q9ULX5 631 aa11.51□□□□□ -0.57
SSBP3-214ENST00000533209 PLCL2Q9UPR0 1127 aa11.51□□□□□ -0.57
SSBP3-214ENST00000533209 CELSR3Q9NYQ7 3312 aa11.51□□□□□ -0.57
SSBP3-214ENST00000533209 URB1O60287 2271 aaKnown RBP11.51□□□□□ -0.57
SSBP3-214ENST00000533209 A0A087WV48 116 aa11.5□□□□□ -0.57
SSBP3-214ENST00000533209 TEX51A0A1B0GUA7 166 aa11.5□□□□□ -0.57
SSBP3-214ENST00000533209 NCF1BA6NI72 391 aaPredicted RBP11.5□□□□□ -0.57
SSBP3-214ENST00000533209 SRRM3A6NNA2 597 aaPredicted RBP11.5□□□□□ -0.57
SSBP3-214ENST00000533209 NCF1CA8MVU1 366 aaPredicted RBP11.5□□□□□ -0.57
SSBP3-214ENST00000533209 STMND1H3BQB6 276 aa11.5□□□□□ -0.57
SSBP3-214ENST00000533209 TAPBPO15533 448 aa11.5□□□□□ -0.57
SSBP3-214ENST00000533209 RAD1O60671 282 aa11.5□□□□□ -0.57
SSBP3-214ENST00000533209 KERAO60938 352 aa11.5□□□□□ -0.57
SSBP3-214ENST00000533209 KIAA0754O94854 1291 aa11.5□□□□□ -0.57
SSBP3-214ENST00000533209 NCF1P14598 390 aaPredicted RBP11.5□□□□□ -0.57
SSBP3-214ENST00000533209 HNMTP50135 292 aa11.5□□□□□ -0.57
SSBP3-214ENST00000533209 ITGA1P56199 1179 aa11.5□□□□□ -0.57
SSBP3-214ENST00000533209 NAA25Q14CX7 972 aa11.5□□□□□ -0.57
SSBP3-214ENST00000533209 ACAP2Q15057 778 aa11.5□□□□□ -0.57
SSBP3-214ENST00000533209 ST3GAL2Q16842 350 aa11.5□□□□□ -0.57
SSBP3-214ENST00000533209 PTCHD3Q3KNS1 767 aa11.5□□□□□ -0.57
SSBP3-214ENST00000533209 CDKL4Q5MAI5 379 aa11.5□□□□□ -0.57
SSBP3-214ENST00000533209 LGSNQ5TDP6 509 aa11.5□□□□□ -0.57
SSBP3-214ENST00000533209 PRAMEF17Q5VTA0 474 aa11.5□□□□□ -0.57
SSBP3-214ENST00000533209 FBXO42Q6P3S6 717 aa11.5□□□□□ -0.57
SSBP3-214ENST00000533209 LCTLQ6UWM7 567 aa11.5□□□□□ -0.57
SSBP3-214ENST00000533209 RNF44Q7L0R7 432 aa11.5□□□□□ -0.57
SSBP3-214ENST00000533209 TIPARPQ7Z3E1 657 aaKnown RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms