RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 PTERQ96BW5 349 aa16.51■□□□□ 0.23
PHRF1-204ENST00000532550 SLC25A23Q9BV35 468 aa16.51■□□□□ 0.23
PHRF1-204ENST00000532550 UTP6Q9NYH9 597 aaKnown RBP16.51■□□□□ 0.23
PHRF1-204ENST00000532550 TAS2R13Q9NYV9 303 aa16.51■□□□□ 0.23
PHRF1-204ENST00000532550 ZC3H7BQ9UGR2 993 aaKnown RBP16.51■□□□□ 0.23
PHRF1-204ENST00000532550 G3BP2Q9UN86 482 aaKnown RBP16.51■□□□□ 0.23
PHRF1-204ENST00000532550 DSCR3O14972 297 aa16.5■□□□□ 0.23
PHRF1-204ENST00000532550 CCNDBP1O95273 360 aa16.5■□□□□ 0.23
PHRF1-204ENST00000532550 ZIC2O95409 532 aaPredicted RBP16.5■□□□□ 0.23
PHRF1-204ENST00000532550 SLC16A8O95907 504 aa16.5■□□□□ 0.23
PHRF1-204ENST00000532550 AHSGP02765 367 aa16.5■□□□□ 0.23
PHRF1-204ENST00000532550 EIF2S1P05198 315 aaKnown RBP16.5■□□□□ 0.23
PHRF1-204ENST00000532550 MCM3P25205 808 aa16.5■□□□□ 0.23
PHRF1-204ENST00000532550 GCGRP47871 477 aa16.5■□□□□ 0.23
PHRF1-204ENST00000532550 RGS4P49798 205 aa16.5■□□□□ 0.23
PHRF1-204ENST00000532550 CSRP3P50461 194 aa16.5■□□□□ 0.23
PHRF1-204ENST00000532550 ITGA8P53708 1063 aa16.5■□□□□ 0.23
PHRF1-204ENST00000532550 ARL4CP56559 192 aa16.5■□□□□ 0.23
PHRF1-204ENST00000532550 PRDX1Q06830 199 aaKnown RBP16.5■□□□□ 0.23
PHRF1-204ENST00000532550 LRRC8EQ6NSJ5 796 aa16.5■□□□□ 0.23
PHRF1-204ENST00000532550 HIBCHQ6NVY1 386 aaPredicted RBP16.5■□□□□ 0.23
PHRF1-204ENST00000532550 MRPL14Q6P1L8 145 aaKnown RBP16.5■□□□□ 0.23
PHRF1-204ENST00000532550 FBXO42Q6P3S6 717 aa16.5■□□□□ 0.23
PHRF1-204ENST00000532550 KIAA0408Q6ZU52 694 aa16.5■□□□□ 0.23
PHRF1-204ENST00000532550 PALM2Q8IXS6 379 aa16.5■□□□□ 0.23
PHRF1-204ENST00000532550 OR2Y1Q8NGV0 311 aa16.5■□□□□ 0.23
PHRF1-204ENST00000532550 ZNF480Q8WV37 535 aa16.5■□□□□ 0.23
PHRF1-204ENST00000532550 LRRC39Q96DD0 335 aa16.5■□□□□ 0.23
PHRF1-204ENST00000532550 CERS2Q96G23 380 aa16.5■□□□□ 0.23
PHRF1-204ENST00000532550 CFAP36Q96G28 342 aa16.5■□□□□ 0.23
PHRF1-204ENST00000532550 SNF8Q96H20 258 aa16.5■□□□□ 0.23
PHRF1-204ENST00000532550 PWWP2AQ96N64 755 aa16.5■□□□□ 0.23
PHRF1-204ENST00000532550 ZNF285Q96NJ3 590 aa16.5■□□□□ 0.23
PHRF1-204ENST00000532550 NDNQ99608 321 aa16.5■□□□□ 0.23
PHRF1-204ENST00000532550 TRIM51Q9BSJ1 452 aa16.5■□□□□ 0.23
PHRF1-204ENST00000532550 TRIM31Q9BZY9 425 aa16.5■□□□□ 0.23
PHRF1-204ENST00000532550 ABCF3Q9NUQ8 709 aa16.5■□□□□ 0.23
PHRF1-204ENST00000532550 CHMP2BQ9UQN3 213 aa16.5■□□□□ 0.23
PHRF1-204ENST00000532550 PCDHGA9Q9Y5G4 932 aaKnown RBP16.5■□□□□ 0.23
PHRF1-204ENST00000532550 HEATR5BQ9P2D3 2071 aa16.5■□□□□ 0.23
PHRF1-204ENST00000532550 HYKKA2RU49 373 aa16.49■□□□□ 0.23
PHRF1-204ENST00000532550 OR2A25A4D2G3 310 aa16.49■□□□□ 0.23
PHRF1-204ENST00000532550 FITM1A5D6W6 292 aa16.49■□□□□ 0.23
PHRF1-204ENST00000532550 EFCAB8A8MWE9 144 aa16.49■□□□□ 0.23
PHRF1-204ENST00000532550 E7ENX8 843 aa16.49■□□□□ 0.23
PHRF1-204ENST00000532550 PEX12O00623 359 aa16.49■□□□□ 0.23
PHRF1-204ENST00000532550 GABRB3P28472 473 aa16.49■□□□□ 0.23
PHRF1-204ENST00000532550 PGDP52209 483 aa16.49■□□□□ 0.23
PHRF1-204ENST00000532550 YBX1P67809 324 aaKnown RBP16.49■□□□□ 0.23
PHRF1-204ENST00000532550 TAP2Q03519 686 aa16.49■□□□□ 0.23
PHRF1-204ENST00000532550 ATP1A4Q13733 1029 aa16.49■□□□□ 0.23
PHRF1-204ENST00000532550 HIF1AQ16665 826 aa16.49■□□□□ 0.23
PHRF1-204ENST00000532550 THEMIS2Q5TEJ8 643 aa16.49■□□□□ 0.23
PHRF1-204ENST00000532550 ICE2Q659A1 982 aa16.49■□□□□ 0.23
PHRF1-204ENST00000532550 FRMPD2BQ6IN97 320 aa16.49■□□□□ 0.23
PHRF1-204ENST00000532550 OVCH1Q7RTY7 1134 aa16.49■□□□□ 0.23
PHRF1-204ENST00000532550 PIWIL4Q7Z3Z4 852 aaKnown RBP16.49■□□□□ 0.23
PHRF1-204ENST00000532550 SPNS2Q8IVW8 549 aa16.49■□□□□ 0.23
PHRF1-204ENST00000532550 CNTN4Q8IWV2 1026 aa16.49■□□□□ 0.23
PHRF1-204ENST00000532550 PPFIBP2Q8ND30 876 aa16.49■□□□□ 0.23
PHRF1-204ENST00000532550 MCOLN3Q8TDD5 553 aa16.49■□□□□ 0.23
PHRF1-204ENST00000532550 EEF1AKMT1Q8WVE0 214 aa16.49■□□□□ 0.23
PHRF1-204ENST00000532550 KRT12Q99456 494 aa16.49■□□□□ 0.23
PHRF1-204ENST00000532550 ZFYVE21Q9BQ24 234 aa16.49■□□□□ 0.23
PHRF1-204ENST00000532550 PLCD4Q9BRC7 762 aa16.49■□□□□ 0.23
PHRF1-204ENST00000532550 EPN3Q9H201 632 aa16.49■□□□□ 0.23
PHRF1-204ENST00000532550 CLMPQ9H6B4 373 aa16.49■□□□□ 0.23
PHRF1-204ENST00000532550 ENAMQ9NRM1 1142 aa16.49■□□□□ 0.23
PHRF1-204ENST00000532550 ANKMY1Q9P2S6 941 aa16.49■□□□□ 0.23
PHRF1-204ENST00000532550 TAC3Q9UHF0 121 aa16.49■□□□□ 0.23
PHRF1-204ENST00000532550 LOC105369274A0A096LPK9 316 aa16.48■□□□□ 0.23
PHRF1-204ENST00000532550 LOC102723532A0A0G2JNH3 316 aa16.48■□□□□ 0.23
PHRF1-204ENST00000532550 A6NL46 340 aa16.48■□□□□ 0.23
PHRF1-204ENST00000532550 NDC80O14777 642 aa16.48■□□□□ 0.23
PHRF1-204ENST00000532550 SEC31AO94979 1220 aaKnown RBP16.48■□□□□ 0.23
PHRF1-204ENST00000532550 ONECUT2O95948 504 aa16.48■□□□□ 0.23
PHRF1-204ENST00000532550 IGHEP01854 428 aa16.48■□□□□ 0.23
PHRF1-204ENST00000532550 ALBP02768 609 aa16.48■□□□□ 0.23
PHRF1-204ENST00000532550 ABATP80404 500 aa16.48■□□□□ 0.23
PHRF1-204ENST00000532550 TEDDM1Q5T9Z0 273 aa16.48■□□□□ 0.23
PHRF1-204ENST00000532550 RNF44Q7L0R7 432 aa16.48■□□□□ 0.23
PHRF1-204ENST00000532550 GALNT7Q86SF2 657 aa16.48■□□□□ 0.23
PHRF1-204ENST00000532550 OR4N4Q8N0Y3 316 aa16.48■□□□□ 0.23
PHRF1-204ENST00000532550 MYO1HQ8N1T3 1032 aa16.48■□□□□ 0.23
PHRF1-204ENST00000532550 FKBP10Q96AY3 582 aa16.48■□□□□ 0.23
PHRF1-204ENST00000532550 FER1L6-AS2Q96M78 137 aa16.48■□□□□ 0.23
PHRF1-204ENST00000532550 CCDC138Q96M89 665 aa16.48■□□□□ 0.23
PHRF1-204ENST00000532550 SLC6A20Q9NP91 592 aa16.48■□□□□ 0.23
PHRF1-204ENST00000532550 SLC22A11Q9NSA0 550 aa16.48■□□□□ 0.23
PHRF1-204ENST00000532550 TEX264Q9Y6I9 313 aa16.48■□□□□ 0.23
PHRF1-204ENST00000532550 NBASA2RRP1 2371 aa16.48■□□□□ 0.23
PHRF1-204ENST00000532550 TNRC6AQ8NDV7 1962 aaKnown RBP16.47■□□□□ 0.23
PHRF1-204ENST00000532550 NRP2O60462 931 aa16.47■□□□□ 0.23
PHRF1-204ENST00000532550 CNOT3O75175 753 aaKnown RBP16.47■□□□□ 0.23
PHRF1-204ENST00000532550 PDGFAP04085 211 aa16.47■□□□□ 0.23
PHRF1-204ENST00000532550 C8GP07360 202 aa16.47■□□□□ 0.23
PHRF1-204ENST00000532550 OR1D4P47884 311 aa16.47■□□□□ 0.23
PHRF1-204ENST00000532550 TIAL1Q01085 375 aaKnown RBP eCLIP16.47■□□□□ 0.23
PHRF1-204ENST00000532550 COLEC12Q5KU26 742 aa16.47■□□□□ 0.23
PHRF1-204ENST00000532550 RBM20Q5T481 1227 aaKnown RBP16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms