RNA–Protein interactions for RNA: ENST00000531857.1

PKP3-208, Transcript of plakophilin 3, humanhuman

TSL 4

Gene PKP3, Length 687 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-208ENST00000531857 SEMA3AQ14563 771 aa16.54■□□□□ 0.24
PKP3-208ENST00000531857 ERCC6LQ2NKX8 1250 aa16.54■□□□□ 0.24
PKP3-208ENST00000531857 GLE1Q53GS7 698 aaKnown RBP16.54■□□□□ 0.24
PKP3-208ENST00000531857 TCTE1Q5JU00 501 aa16.54■□□□□ 0.24
PKP3-208ENST00000531857 WASHC2DQ5SRD0 308 aa16.54■□□□□ 0.24
PKP3-208ENST00000531857 MEI1Q5TIA1 1274 aa16.54■□□□□ 0.24
PKP3-208ENST00000531857 FRMPD2BQ6IN97 320 aa16.54■□□□□ 0.24
PKP3-208ENST00000531857 DCUN1D3Q8IWE4 304 aa16.54■□□□□ 0.24
PKP3-208ENST00000531857 TTC29Q8NA56 475 aaPredicted RBP16.54■□□□□ 0.24
PKP3-208ENST00000531857 OR52K1Q8NGK4 314 aa16.54■□□□□ 0.24
PKP3-208ENST00000531857 STT3BQ8TCJ2 826 aa16.54■□□□□ 0.24
PKP3-208ENST00000531857 HDAC10Q969S8 669 aa16.54■□□□□ 0.24
PKP3-208ENST00000531857 RELTQ969Z4 430 aa16.54■□□□□ 0.24
PKP3-208ENST00000531857 MAGEB10Q96LZ2 347 aaPredicted RBP16.54■□□□□ 0.24
PKP3-208ENST00000531857 INTS7Q9NVH2 962 aaKnown RBP16.54■□□□□ 0.24
PKP3-208ENST00000531857 DUSP10Q9Y6W6 482 aa16.54■□□□□ 0.24
PKP3-208ENST00000531857 DCHS2Q6V1P9 2916 aa16.53■□□□□ 0.24
PKP3-208ENST00000531857 LOC105369274A0A096LPK9 316 aa16.53■□□□□ 0.24
PKP3-208ENST00000531857 LOC102723532A0A0G2JNH3 316 aa16.53■□□□□ 0.24
PKP3-208ENST00000531857 HYKKA2RU49 373 aa16.53■□□□□ 0.24
PKP3-208ENST00000531857 KRT87PA6NCN2 255 aa16.53■□□□□ 0.24
PKP3-208ENST00000531857 RASGRF2O14827 1237 aa16.53■□□□□ 0.24
PKP3-208ENST00000531857 PCDH17O14917 1159 aa16.53■□□□□ 0.24
PKP3-208ENST00000531857 ACPPP15309 386 aa16.53■□□□□ 0.24
PKP3-208ENST00000531857 PSMB5P28074 263 aa16.53■□□□□ 0.24
PKP3-208ENST00000531857 ARG2P78540 354 aa16.53■□□□□ 0.24
PKP3-208ENST00000531857 SRSF11Q05519 484 aaKnown RBP16.53■□□□□ 0.24
PKP3-208ENST00000531857 RPS6KA1Q15418 735 aa16.53■□□□□ 0.24
PKP3-208ENST00000531857 FAM214AQ32MH5 1076 aa16.53■□□□□ 0.24
PKP3-208ENST00000531857 ATG9BQ674R7 924 aa16.53■□□□□ 0.24
PKP3-208ENST00000531857 NLRP9Q7RTR0 991 aa16.53■□□□□ 0.24
PKP3-208ENST00000531857 LAPTM4BQ86VI4 370 aa16.53■□□□□ 0.24
PKP3-208ENST00000531857 OR4N4Q8N0Y3 316 aa16.53■□□□□ 0.24
PKP3-208ENST00000531857 KRT222Q8N1A0 295 aa16.53■□□□□ 0.24
PKP3-208ENST00000531857 PSMF1Q92530 271 aa16.53■□□□□ 0.24
PKP3-208ENST00000531857 ZNF778Q96MU6 729 aa16.53■□□□□ 0.24
PKP3-208ENST00000531857 OSBPL9Q96SU4 736 aa16.53■□□□□ 0.24
PKP3-208ENST00000531857 ZNF304Q9HCX3 659 aa16.53■□□□□ 0.24
PKP3-208ENST00000531857 IL1RAPL1Q9NZN1 696 aa16.53■□□□□ 0.24
PKP3-208ENST00000531857 PTGFRNQ9P2B2 879 aa16.53■□□□□ 0.24
PKP3-208ENST00000531857 CAPN6Q9Y6Q1 641 aa16.53■□□□□ 0.24
PKP3-208ENST00000531857 POLQO75417 2590 aa16.52■□□□□ 0.24
PKP3-208ENST00000531857 PCNX1Q96RV3 2341 aa16.52■□□□□ 0.24
PKP3-208ENST00000531857 PKDREJQ9NTG1 2253 aa16.52■□□□□ 0.24
PKP3-208ENST00000531857 CCDC151A5D8V7 595 aa16.52■□□□□ 0.24
PKP3-208ENST00000531857 MIF4GDA9UHW6 222 aaKnown RBP16.52■□□□□ 0.24
PKP3-208ENST00000531857 TARM1B6A8C7 271 aa16.52■□□□□ 0.24
PKP3-208ENST00000531857 MAP2K7O14733 419 aa16.52■□□□□ 0.24
PKP3-208ENST00000531857 F10P00742 488 aa16.52■□□□□ 0.24
PKP3-208ENST00000531857 ZGLP1P0C6A0 271 aa16.52■□□□□ 0.24
PKP3-208ENST00000531857 H2AFXP16104 143 aaPredicted RBP16.52■□□□□ 0.24
PKP3-208ENST00000531857 CARSP49589 748 aaKnown RBP16.52■□□□□ 0.24
PKP3-208ENST00000531857 P3H1Q32P28 736 aa16.52■□□□□ 0.24
PKP3-208ENST00000531857 CCSMST1Q4G0I0 132 aa16.52■□□□□ 0.24
PKP3-208ENST00000531857 VWA2Q5GFL6 755 aa16.52■□□□□ 0.24
PKP3-208ENST00000531857 UNC5DQ6UXZ4 953 aa16.52■□□□□ 0.24
PKP3-208ENST00000531857 ZNF534Q76KX8 674 aa16.52■□□□□ 0.24
PKP3-208ENST00000531857 KBTBD2Q8IY47 623 aa16.52■□□□□ 0.24
PKP3-208ENST00000531857 AMER2Q8N7J2 671 aa16.52■□□□□ 0.24
PKP3-208ENST00000531857 BRIX1Q8TDN6 353 aaKnown RBP16.52■□□□□ 0.24
PKP3-208ENST00000531857 ASZ1Q8WWH4 475 aa16.52■□□□□ 0.24
PKP3-208ENST00000531857 ITLN2Q8WWU7 325 aaPredicted RBP16.52■□□□□ 0.24
PKP3-208ENST00000531857 NR4A3Q92570 626 aa16.52■□□□□ 0.24
PKP3-208ENST00000531857 ZUFSPQ96AP4 578 aa16.52■□□□□ 0.24
PKP3-208ENST00000531857 MIEF2Q96C03 454 aa16.52■□□□□ 0.24
PKP3-208ENST00000531857 VPS50Q96JG6 964 aa16.52■□□□□ 0.24
PKP3-208ENST00000531857 NAP1L3Q99457 506 aaPredicted RBP16.52■□□□□ 0.24
PKP3-208ENST00000531857 MIPEPQ99797 713 aa16.52■□□□□ 0.24
PKP3-208ENST00000531857 TMEM121Q9BTD3 319 aa16.52■□□□□ 0.24
PKP3-208ENST00000531857 ZC3H7BQ9UGR2 993 aaKnown RBP16.52■□□□□ 0.24
PKP3-208ENST00000531857 C3orf18Q9UK00 162 aa16.52■□□□□ 0.24
PKP3-208ENST00000531857 SLC39A10Q9ULF5 831 aa16.52■□□□□ 0.24
PKP3-208ENST00000531857 R3HDM2Q9Y2K5 976 aaKnown RBP16.52■□□□□ 0.24
PKP3-208ENST00000531857 SCN2AQ99250 2005 aa16.52■□□□□ 0.23
PKP3-208ENST00000531857 CELSR1Q9NYQ6 3014 aa16.51■□□□□ 0.23
PKP3-208ENST00000531857 A0A0J9YVX5 310 aa16.51■□□□□ 0.23
PKP3-208ENST00000531857 PSMD3O43242 534 aa16.51■□□□□ 0.23
PKP3-208ENST00000531857 SRPX2O60687 465 aaPredicted RBP16.51■□□□□ 0.23
PKP3-208ENST00000531857 SLCO2B1O94956 709 aa16.51■□□□□ 0.23
PKP3-208ENST00000531857 RPN2P04844 631 aa16.51■□□□□ 0.23
PKP3-208ENST00000531857 APOA4P06727 396 aa16.51■□□□□ 0.23
PKP3-208ENST00000531857 PRR35P0CG20 571 aa16.51■□□□□ 0.23
PKP3-208ENST00000531857 COX6A1P12074 109 aa16.51■□□□□ 0.23
PKP3-208ENST00000531857 AOAHP28039 575 aa16.51■□□□□ 0.23
PKP3-208ENST00000531857 SOX11P35716 441 aa16.51■□□□□ 0.23
PKP3-208ENST00000531857 TNFSF10P50591 281 aa16.51■□□□□ 0.23
PKP3-208ENST00000531857 YBX1P67809 324 aaKnown RBP16.51■□□□□ 0.23
PKP3-208ENST00000531857 OCA2Q04671 838 aa16.51■□□□□ 0.23
PKP3-208ENST00000531857 ART3Q13508 389 aa16.51■□□□□ 0.23
PKP3-208ENST00000531857 TEX35Q5T0J7 233 aa16.51■□□□□ 0.23
PKP3-208ENST00000531857 TSTD2Q5T7W7 516 aa16.51■□□□□ 0.23
PKP3-208ENST00000531857 AFTPHQ6ULP2 937 aa16.51■□□□□ 0.23
PKP3-208ENST00000531857 LDB1Q86U70 411 aaPredicted RBP16.51■□□□□ 0.23
PKP3-208ENST00000531857 MMGT1Q8N4V1 131 aa16.51■□□□□ 0.23
PKP3-208ENST00000531857 SIRT6Q8N6T7 355 aa16.51■□□□□ 0.23
PKP3-208ENST00000531857 OR4L1Q8NH43 312 aa16.51■□□□□ 0.23
PKP3-208ENST00000531857 ZNF282Q9UDV7 671 aaPredicted RBP16.51■□□□□ 0.23
PKP3-208ENST00000531857 AMFRQ9UKV5 643 aa16.51■□□□□ 0.23
PKP3-208ENST00000531857 RAB21Q9UL25 225 aa16.51■□□□□ 0.23
PKP3-208ENST00000531857 ADGRG4Q8IZF6 3080 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms