RNA–Protein interactions for RNA: ENST00000531551.5

CTSB-222, Transcript of cathepsin B, humanhuman

TSL 1 (best)

Gene CTSB, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-222ENST00000531551 MRPS30Q9NP92 439 aaKnown RBP17.02■□□□□ 0.32
CTSB-222ENST00000531551 SH2B3Q9UQQ2 575 aa17.02■□□□□ 0.32
CTSB-222ENST00000531551 KLHL20Q9Y2M5 609 aa17.02■□□□□ 0.32
CTSB-222ENST00000531551 GOLGA4Q13439 2230 aaKnown RBP17.02■□□□□ 0.31
CTSB-222ENST00000531551 E7EQ34 232 aa17.01■□□□□ 0.31
CTSB-222ENST00000531551 POLR3GO15318 223 aaPredicted RBP17.01■□□□□ 0.31
CTSB-222ENST00000531551 PRICKLE3O43900 615 aaPredicted RBP17.01■□□□□ 0.31
CTSB-222ENST00000531551 RASSF9O75901 435 aa17.01■□□□□ 0.31
CTSB-222ENST00000531551 GP1BAP07359 652 aa17.01■□□□□ 0.31
CTSB-222ENST00000531551 CMPK1P30085 196 aa17.01■□□□□ 0.31
CTSB-222ENST00000531551 CSF2RBP32927 897 aa17.01■□□□□ 0.31
CTSB-222ENST00000531551 CFHR1Q03591 330 aa17.01■□□□□ 0.31
CTSB-222ENST00000531551 PRDX1Q06830 199 aaKnown RBP17.01■□□□□ 0.31
CTSB-222ENST00000531551 TMPRSS11BQ86T26 416 aa17.01■□□□□ 0.31
CTSB-222ENST00000531551 MYLK4Q86YV6 388 aaPredicted RBP17.01■□□□□ 0.31
CTSB-222ENST00000531551 PLXDC1Q8IUK5 500 aa17.01■□□□□ 0.31
CTSB-222ENST00000531551 KLHDC8AQ8IYD2 350 aa17.01■□□□□ 0.31
CTSB-222ENST00000531551 DCBLD1Q8N8Z6 715 aa17.01■□□□□ 0.31
CTSB-222ENST00000531551 OR2L3Q8NG85 312 aa17.01■□□□□ 0.31
CTSB-222ENST00000531551 ZNF483Q8TF39 744 aaPredicted RBP17.01■□□□□ 0.31
CTSB-222ENST00000531551 SLC5A11Q8WWX8 675 aa17.01■□□□□ 0.31
CTSB-222ENST00000531551 NEIL2Q969S2 332 aa17.01■□□□□ 0.31
CTSB-222ENST00000531551 C1QTNF3Q9BXJ4 246 aa17.01■□□□□ 0.31
CTSB-222ENST00000531551 SHCBP1LQ9BZQ2 653 aa17.01■□□□□ 0.31
CTSB-222ENST00000531551 GSTO2Q9H4Y5 243 aa17.01■□□□□ 0.31
CTSB-222ENST00000531551 ZBTB26Q9HCK0 441 aa17.01■□□□□ 0.31
CTSB-222ENST00000531551 TMEM9Q9P0T7 183 aa17.01■□□□□ 0.31
CTSB-222ENST00000531551 POMT2Q9UKY4 750 aa17.01■□□□□ 0.31
CTSB-222ENST00000531551 ASCC3Q8N3C0 2202 aaKnown RBP17.01■□□□□ 0.31
CTSB-222ENST00000531551 A8MU76 341 aa17.01■□□□□ 0.31
CTSB-222ENST00000531551 PPP6CO00743 305 aa17.01■□□□□ 0.31
CTSB-222ENST00000531551 CLGNO14967 610 aa17.01■□□□□ 0.31
CTSB-222ENST00000531551 KIF1CO43896 1103 aaKnown RBP17.01■□□□□ 0.31
CTSB-222ENST00000531551 KATNA1O75449 491 aa17.01■□□□□ 0.31
CTSB-222ENST00000531551 CPNE6O95741 557 aa17.01■□□□□ 0.31
CTSB-222ENST00000531551 CDH1P12830 882 aa17.01■□□□□ 0.31
CTSB-222ENST00000531551 HOXB3P14651 431 aaPredicted RBP17.01■□□□□ 0.31
CTSB-222ENST00000531551 GNAZP19086 355 aa17.01■□□□□ 0.31
CTSB-222ENST00000531551 PIK3CGP48736 1102 aa17.01■□□□□ 0.31
CTSB-222ENST00000531551 CCNG1P51959 295 aa17.01■□□□□ 0.31
CTSB-222ENST00000531551 CATSPEREQ5SY80 951 aa17.01■□□□□ 0.31
CTSB-222ENST00000531551 KIAA1614Q5VZ46 1190 aa17.01■□□□□ 0.31
CTSB-222ENST00000531551 METTL2BQ6P1Q9 378 aaKnown RBP17.01■□□□□ 0.31
CTSB-222ENST00000531551 FLVCR1-AS1Q8TAF5 88 aa17.01■□□□□ 0.31
CTSB-222ENST00000531551 CDK15Q96Q40 435 aa17.01■□□□□ 0.31
CTSB-222ENST00000531551 GFM1Q96RP9 751 aaKnown RBP17.01■□□□□ 0.31
CTSB-222ENST00000531551 MAP3K3Q99759 626 aa17.01■□□□□ 0.31
CTSB-222ENST00000531551 MANSC1Q9H8J5 431 aa17.01■□□□□ 0.31
CTSB-222ENST00000531551 CUEDC1Q9NWM3 386 aaPredicted RBP17.01■□□□□ 0.31
CTSB-222ENST00000531551 RIF1Q5UIP0 2472 aaKnown RBP17■□□□□ 0.31
CTSB-222ENST00000531551 H7BY64 318 aa17■□□□□ 0.31
CTSB-222ENST00000531551 RFPL3O75679 317 aa17■□□□□ 0.31
CTSB-222ENST00000531551 CCNDBP1O95273 360 aa17■□□□□ 0.31
CTSB-222ENST00000531551 SERPINE1P05121 402 aa17■□□□□ 0.31
CTSB-222ENST00000531551 PVRP15151 417 aa17■□□□□ 0.31
CTSB-222ENST00000531551 GYS2P54840 703 aa17■□□□□ 0.31
CTSB-222ENST00000531551 GUCY1A3Q02108 690 aa17■□□□□ 0.31
CTSB-222ENST00000531551 STX3Q13277 289 aa17■□□□□ 0.31
CTSB-222ENST00000531551 SPIDRQ14159 915 aa17■□□□□ 0.31
CTSB-222ENST00000531551 XKR6Q5GH73 641 aa17■□□□□ 0.31
CTSB-222ENST00000531551 TTC19Q6DKK2 380 aaPredicted RBP17■□□□□ 0.31
CTSB-222ENST00000531551 FRMD7Q6ZUT3 714 aa17■□□□□ 0.31
CTSB-222ENST00000531551 TRIM42Q8IWZ5 723 aa17■□□□□ 0.31
CTSB-222ENST00000531551 OR52B6Q8NGF0 335 aa17■□□□□ 0.31
CTSB-222ENST00000531551 LRRC8CQ8TDW0 803 aa17■□□□□ 0.31
CTSB-222ENST00000531551 PRAP1Q96NZ9 151 aa17■□□□□ 0.31
CTSB-222ENST00000531551 CAPS2Q9BXY5 557 aa17■□□□□ 0.31
CTSB-222ENST00000531551 ACTR8Q9H981 624 aa17■□□□□ 0.31
CTSB-222ENST00000531551 PRM3Q9NNZ6 103 aa17■□□□□ 0.31
CTSB-222ENST00000531551 CDV3Q9UKY7 258 aaKnown RBP17■□□□□ 0.31
CTSB-222ENST00000531551 A0A0J9YY10 115 aa16.99■□□□□ 0.31
CTSB-222ENST00000531551 OR7A17O14581 309 aa16.99■□□□□ 0.31
CTSB-222ENST00000531551 GIPC1O14908 333 aa16.99■□□□□ 0.31
CTSB-222ENST00000531551 H2AFYO75367 372 aaKnown RBP16.99■□□□□ 0.31
CTSB-222ENST00000531551 EPORP19235 508 aa16.99■□□□□ 0.31
CTSB-222ENST00000531551 MAGP20916 626 aa16.99■□□□□ 0.31
CTSB-222ENST00000531551 VARSP26640 1264 aaKnown RBP16.99■□□□□ 0.31
CTSB-222ENST00000531551 LSSP48449 732 aa16.99■□□□□ 0.31
CTSB-222ENST00000531551 ABATP80404 500 aa16.99■□□□□ 0.31
CTSB-222ENST00000531551 IRF8Q02556 426 aa16.99■□□□□ 0.31
CTSB-222ENST00000531551 CHIT1Q13231 466 aa16.99■□□□□ 0.31
CTSB-222ENST00000531551 SLC5A12Q1EHB4 618 aa16.99■□□□□ 0.31
CTSB-222ENST00000531551 ATG16L1Q676U5 607 aa16.99■□□□□ 0.31
CTSB-222ENST00000531551 TMEM71Q6P5X7 295 aa16.99■□□□□ 0.31
CTSB-222ENST00000531551 WDR74Q6RFH5 385 aaPredicted RBP16.99■□□□□ 0.31
CTSB-222ENST00000531551 CNDP1Q96KN2 507 aa16.99■□□□□ 0.31
CTSB-222ENST00000531551 DPH7Q9BTV6 452 aa16.99■□□□□ 0.31
CTSB-222ENST00000531551 RAB33BQ9H082 229 aa16.99■□□□□ 0.31
CTSB-222ENST00000531551 FAM53CQ9NYF3 392 aa16.99■□□□□ 0.31
CTSB-222ENST00000531551 GPRC5BQ9NZH0 403 aa16.99■□□□□ 0.31
CTSB-222ENST00000531551 EPHA6Q9UF33 1036 aa16.99■□□□□ 0.31
CTSB-222ENST00000531551 SPAARA0A1B0GVQ0 90 aa16.99■□□□□ 0.31
CTSB-222ENST00000531551 AGRPO00253 132 aa16.99■□□□□ 0.31
CTSB-222ENST00000531551 NPHS1O60500 1241 aa16.99■□□□□ 0.31
CTSB-222ENST00000531551 LYPLA1O75608 230 aaPredicted RBP16.99■□□□□ 0.31
CTSB-222ENST00000531551 HSPA4LO95757 839 aa16.99■□□□□ 0.31
CTSB-222ENST00000531551 MLYCDO95822 493 aa16.99■□□□□ 0.31
CTSB-222ENST00000531551 CHRNGP07510 517 aa16.99■□□□□ 0.31
CTSB-222ENST00000531551 GRK2P25098 689 aa16.99■□□□□ 0.31
CTSB-222ENST00000531551 MEF2AQ02078 507 aaPredicted RBP16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms