RNA–Protein interactions for RNA: ENST00000531490.1

TRIM53CP-201, Transcript of tripartite motif containing 53C, pseudogene, humanhuman

BASIC

Gene TRIM53CP, Length 1,354 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM53CP-201ENST00000531490 SQSTM1Q13501 440 aa6.8□□□□□ -1.32
TRIM53CP-201ENST00000531490 TUBB2AQ13885 445 aa6.8□□□□□ -1.32
TRIM53CP-201ENST00000531490 GTF2H3Q13889 308 aa6.8□□□□□ -1.32
TRIM53CP-201ENST00000531490 ERV3-1Q14264 604 aa6.8□□□□□ -1.32
TRIM53CP-201ENST00000531490 KCNJ11Q14654 390 aa6.8□□□□□ -1.32
TRIM53CP-201ENST00000531490 RPE65Q16518 533 aa6.8□□□□□ -1.32
TRIM53CP-201ENST00000531490 GPR33Q49SQ1 333 aa6.8□□□□□ -1.32
TRIM53CP-201ENST00000531490 ZNF658BQ4V348 819 aaPredicted RBP6.8□□□□□ -1.32
TRIM53CP-201ENST00000531490 LRRC8BQ6P9F7 803 aa6.8□□□□□ -1.32
TRIM53CP-201ENST00000531490 C4orf22Q6V702 233 aa6.8□□□□□ -1.32
TRIM53CP-201ENST00000531490 WASH2PQ6VEQ5 465 aa6.8□□□□□ -1.32
TRIM53CP-201ENST00000531490 SLC9B2Q86UD5 537 aa6.8□□□□□ -1.32
TRIM53CP-201ENST00000531490 FAM169BQ8N8A8 192 aa6.8□□□□□ -1.32
TRIM53CP-201ENST00000531490 TMEM52Q8NDY8 209 aa6.8□□□□□ -1.32
TRIM53CP-201ENST00000531490 OR4D9Q8NGE8 314 aa6.8□□□□□ -1.32
TRIM53CP-201ENST00000531490 OR2L2Q8NH16 312 aa6.8□□□□□ -1.32
TRIM53CP-201ENST00000531490 OR4L1Q8NH43 312 aa6.8□□□□□ -1.32
TRIM53CP-201ENST00000531490 CPT1CQ8TCG5 803 aa6.8□□□□□ -1.32
TRIM53CP-201ENST00000531490 CPT1BQ92523 772 aa6.8□□□□□ -1.32
TRIM53CP-201ENST00000531490 KIAA1143Q96AT1 154 aaPredicted RBP6.8□□□□□ -1.32
TRIM53CP-201ENST00000531490 LRRC45Q96CN5 670 aa6.8□□□□□ -1.32
TRIM53CP-201ENST00000531490 MFSD3Q96ES6 412 aa6.8□□□□□ -1.32
TRIM53CP-201ENST00000531490 CAPZA3Q96KX2 299 aa6.8□□□□□ -1.32
TRIM53CP-201ENST00000531490 C16orf45Q96MC5 204 aaPredicted RBP6.8□□□□□ -1.32
TRIM53CP-201ENST00000531490 RANBP9Q96S59 729 aa6.8□□□□□ -1.32
TRIM53CP-201ENST00000531490 COPS8Q99627 209 aa6.8□□□□□ -1.32
TRIM53CP-201ENST00000531490 C19orf43Q9BQ61 176 aa6.8□□□□□ -1.32
TRIM53CP-201ENST00000531490 TUBB2BQ9BVA1 445 aa6.8□□□□□ -1.32
TRIM53CP-201ENST00000531490 KRTAP9-9Q9BYP9 154 aa6.8□□□□□ -1.32
TRIM53CP-201ENST00000531490 KRTAP9-4Q9BYQ2 154 aa6.8□□□□□ -1.32
TRIM53CP-201ENST00000531490 ASPSCR1Q9BZE9 553 aa6.8□□□□□ -1.32
TRIM53CP-201ENST00000531490 DDX47Q9H0S4 455 aaKnown RBP6.8□□□□□ -1.32
TRIM53CP-201ENST00000531490 SLC40A1Q9NP59 571 aa6.8□□□□□ -1.32
TRIM53CP-201ENST00000531490 SARS2Q9NP81 518 aaKnown RBP6.8□□□□□ -1.32
TRIM53CP-201ENST00000531490 WASH6PQ9NQA3 447 aa6.8□□□□□ -1.32
TRIM53CP-201ENST00000531490 IGSF5Q9NSI5 407 aa6.8□□□□□ -1.32
TRIM53CP-201ENST00000531490 OGFRQ9NZT2 677 aa6.8□□□□□ -1.32
TRIM53CP-201ENST00000531490 LUZP4Q9P127 313 aa6.8□□□□□ -1.32
TRIM53CP-201ENST00000531490 MARCH4Q9P2E8 410 aaPredicted RBP6.8□□□□□ -1.32
TRIM53CP-201ENST00000531490 KCND3Q9UK17 655 aa6.8□□□□□ -1.32
TRIM53CP-201ENST00000531490 TLK1Q9UKI8 766 aa6.8□□□□□ -1.32
TRIM53CP-201ENST00000531490 GPR55Q9Y2T6 319 aaPredicted RBP6.8□□□□□ -1.32
TRIM53CP-201ENST00000531490 TCAF1Q9Y4C2 921 aa6.8□□□□□ -1.32
TRIM53CP-201ENST00000531490 CCDC168Q8NDH2 2452 aa6.79□□□□□ -1.32
TRIM53CP-201ENST00000531490 ADGRG4Q8IZF6 3080 aa6.79□□□□□ -1.32
TRIM53CP-201ENST00000531490 KIR2DS5A0A0G2JLQ3 304 aa6.79□□□□□ -1.32
TRIM53CP-201ENST00000531490 A0A0G2JNG1 304 aa6.79□□□□□ -1.32
TRIM53CP-201ENST00000531490 HEATR9A2RTY3 570 aa6.79□□□□□ -1.32
TRIM53CP-201ENST00000531490 OR5K4A6NMS3 321 aa6.79□□□□□ -1.32
TRIM53CP-201ENST00000531490 IQCF5A8MTL0 148 aa6.79□□□□□ -1.32
TRIM53CP-201ENST00000531490 GOLGA8KD6RF30 607 aa6.79□□□□□ -1.32
TRIM53CP-201ENST00000531490 GOLGA8TH3BQL2 631 aa6.79□□□□□ -1.32
TRIM53CP-201ENST00000531490 KIR2DS3K7RE56 304 aa6.79□□□□□ -1.32
TRIM53CP-201ENST00000531490 CES2O00748 559 aa6.79□□□□□ -1.32
TRIM53CP-201ENST00000531490 KIF1CO43896 1103 aaKnown RBP6.79□□□□□ -1.32
TRIM53CP-201ENST00000531490 PHF2O75151 1096 aa6.79□□□□□ -1.32
TRIM53CP-201ENST00000531490 STK17BO94768 372 aa6.79□□□□□ -1.32
TRIM53CP-201ENST00000531490 TMEM63AO94886 807 aa6.79□□□□□ -1.32
TRIM53CP-201ENST00000531490 VIPP01282 170 aa6.79□□□□□ -1.32
TRIM53CP-201ENST00000531490 F7P08709 466 aaPredicted RBP6.79□□□□□ -1.32
TRIM53CP-201ENST00000531490 GSTM1P09488 218 aa6.79□□□□□ -1.32
TRIM53CP-201ENST00000531490 ZNF28P17035 718 aa6.79□□□□□ -1.32
TRIM53CP-201ENST00000531490 ATF4P18848 351 aaPredicted RBP6.79□□□□□ -1.32
TRIM53CP-201ENST00000531490 TPSB2P20231 275 aa6.79□□□□□ -1.32
TRIM53CP-201ENST00000531490 IVDP26440 423 aa6.79□□□□□ -1.32
TRIM53CP-201ENST00000531490 TNFRSF8P28908 595 aa6.79□□□□□ -1.32
TRIM53CP-201ENST00000531490 MAPK9P45984 424 aa6.79□□□□□ -1.32
TRIM53CP-201ENST00000531490 NPY2RP49146 381 aa6.79□□□□□ -1.32
TRIM53CP-201ENST00000531490 PPM1FP49593 454 aaPredicted RBP6.79□□□□□ -1.32
TRIM53CP-201ENST00000531490 MRPS25P82663 173 aaKnown RBP6.79□□□□□ -1.32
TRIM53CP-201ENST00000531490 SLC7A5Q01650 507 aa6.79□□□□□ -1.32
TRIM53CP-201ENST00000531490 ACVR1Q04771 509 aa6.79□□□□□ -1.32
TRIM53CP-201ENST00000531490 DMPKQ09013 629 aa6.79□□□□□ -1.32
TRIM53CP-201ENST00000531490 TRA2AQ13595 282 aaKnown RBP eCLIP6.79□□□□□ -1.32
TRIM53CP-201ENST00000531490 GPR18Q14330 331 aa6.79□□□□□ -1.32
TRIM53CP-201ENST00000531490 KIR3DS1Q14943 382 aa6.79□□□□□ -1.32
TRIM53CP-201ENST00000531490 KIR2DS5Q14953 304 aa6.79□□□□□ -1.32
TRIM53CP-201ENST00000531490 BRD3Q15059 726 aa6.79□□□□□ -1.32
TRIM53CP-201ENST00000531490 TPSAB1Q15661 275 aa6.79□□□□□ -1.32
TRIM53CP-201ENST00000531490 NADK2Q4G0N4 442 aa6.79□□□□□ -1.32
TRIM53CP-201ENST00000531490 PCID2Q5JVF3 399 aa6.79□□□□□ -1.32
TRIM53CP-201ENST00000531490 AGAP9Q5VTM2 703 aa6.79□□□□□ -1.32
TRIM53CP-201ENST00000531490 TCTN3Q6NUS6 607 aa6.79□□□□□ -1.32
TRIM53CP-201ENST00000531490 DUS1LQ6P1R4 473 aaKnown RBP6.79□□□□□ -1.32
TRIM53CP-201ENST00000531490 TMEM71Q6P5X7 295 aa6.79□□□□□ -1.32
TRIM53CP-201ENST00000531490 TMEM26Q6ZUK4 368 aa6.79□□□□□ -1.32
TRIM53CP-201ENST00000531490 CILP2Q8IUL8 1156 aa6.79□□□□□ -1.32
TRIM53CP-201ENST00000531490 GPR150Q8NGU9 434 aa6.79□□□□□ -1.32
TRIM53CP-201ENST00000531490 KLHL6Q8WZ60 621 aa6.79□□□□□ -1.32
TRIM53CP-201ENST00000531490 DCUN1D1Q96GG9 259 aa6.79□□□□□ -1.32
TRIM53CP-201ENST00000531490 LINC00615Q96LM1 132 aaPredicted RBP6.79□□□□□ -1.32
TRIM53CP-201ENST00000531490 PWWP2AQ96N64 755 aa6.79□□□□□ -1.32
TRIM53CP-201ENST00000531490 CCM2Q9BSQ5 444 aa6.79□□□□□ -1.32
TRIM53CP-201ENST00000531490 KIFC1Q9BW19 673 aa6.79□□□□□ -1.32
TRIM53CP-201ENST00000531490 TRIM55Q9BYV6 548 aa6.79□□□□□ -1.32
TRIM53CP-201ENST00000531490 WWP1Q9H0M0 922 aa6.79□□□□□ -1.32
TRIM53CP-201ENST00000531490 ZNF768Q9H5H4 540 aaKnown RBP6.79□□□□□ -1.32
TRIM53CP-201ENST00000531490 EIF2B3Q9NR50 452 aaKnown RBP6.79□□□□□ -1.32
TRIM53CP-201ENST00000531490 TREX1Q9NSU2 369 aa6.79□□□□□ -1.32
TRIM53CP-201ENST00000531490 SYBUQ9NX95 663 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms