RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 DPH7Q9BTV6 452 aa12.17□□□□□ -0.46
CCDC90B-216ENST00000529856 EFHD1Q9BUP0 239 aa12.17□□□□□ -0.46
CCDC90B-216ENST00000529856 ACSS3Q9H6R3 686 aa12.17□□□□□ -0.46
CCDC90B-216ENST00000529856 ACTR5Q9H9F9 607 aaPredicted RBP12.17□□□□□ -0.46
CCDC90B-216ENST00000529856 AKIRIN1Q9H9L7 192 aaPredicted RBP12.17□□□□□ -0.46
CCDC90B-216ENST00000529856 GPN2Q9H9Y4 310 aaPredicted RBP12.17□□□□□ -0.46
CCDC90B-216ENST00000529856 MRPS30Q9NP92 439 aaKnown RBP12.17□□□□□ -0.46
CCDC90B-216ENST00000529856 LHX9Q9NQ69 397 aa12.17□□□□□ -0.46
CCDC90B-216ENST00000529856 TAC3Q9UHF0 121 aa12.17□□□□□ -0.46
CCDC90B-216ENST00000529856 PCDHGA4Q9Y5G9 962 aa12.17□□□□□ -0.46
CCDC90B-216ENST00000529856 AP1M2Q9Y6Q5 423 aa12.17□□□□□ -0.46
CCDC90B-216ENST00000529856 NBEAQ8NFP9 2946 aa12.17□□□□□ -0.46
CCDC90B-216ENST00000529856 IGKV1-8A0A0C4DH67 115 aa12.16□□□□□ -0.46
CCDC90B-216ENST00000529856 OR2A25A4D2G3 310 aa12.16□□□□□ -0.46
CCDC90B-216ENST00000529856 MEN1O00255 615 aa12.16□□□□□ -0.46
CCDC90B-216ENST00000529856 CDC7O00311 574 aa12.16□□□□□ -0.46
CCDC90B-216ENST00000529856 PHGDHO43175 533 aaKnown RBP12.16□□□□□ -0.46
CCDC90B-216ENST00000529856 CTSVO60911 334 aa12.16□□□□□ -0.46
CCDC90B-216ENST00000529856 CCNDBP1O95273 360 aa12.16□□□□□ -0.46
CCDC90B-216ENST00000529856 ACSL3O95573 720 aa12.16□□□□□ -0.46
CCDC90B-216ENST00000529856 KLK3P07288 261 aaPredicted RBP12.16□□□□□ -0.46
CCDC90B-216ENST00000529856 HBQ1P09105 142 aa12.16□□□□□ -0.46
CCDC90B-216ENST00000529856 RORAP35398 523 aa12.16□□□□□ -0.46
CCDC90B-216ENST00000529856 DLSTP36957 453 aa12.16□□□□□ -0.46
CCDC90B-216ENST00000529856 RAB10P61026 200 aa12.16□□□□□ -0.46
CCDC90B-216ENST00000529856 ABATP80404 500 aa12.16□□□□□ -0.46
CCDC90B-216ENST00000529856 GPS2Q13227 327 aa12.16□□□□□ -0.46
CCDC90B-216ENST00000529856 SLMAPQ14BN4 828 aa12.16□□□□□ -0.46
CCDC90B-216ENST00000529856 ZKSCAN8Q15776 578 aaPredicted RBP12.16□□□□□ -0.46
CCDC90B-216ENST00000529856 ZXDCQ2QGD7 858 aaPredicted RBP12.16□□□□□ -0.46
CCDC90B-216ENST00000529856 THEMIS2Q5TEJ8 643 aa12.16□□□□□ -0.46
CCDC90B-216ENST00000529856 ZNF425Q6IV72 752 aa12.16□□□□□ -0.46
CCDC90B-216ENST00000529856 FBXO42Q6P3S6 717 aa12.16□□□□□ -0.46
CCDC90B-216ENST00000529856 TLDC1Q6P9B6 456 aa12.16□□□□□ -0.46
CCDC90B-216ENST00000529856 AGTRAPQ6RW13 159 aa12.16□□□□□ -0.46
CCDC90B-216ENST00000529856 ZNF517Q6ZMY9 492 aaPredicted RBP12.16□□□□□ -0.46
CCDC90B-216ENST00000529856 DSELQ8IZU8 1212 aa12.16□□□□□ -0.46
CCDC90B-216ENST00000529856 ZSCAN1Q8NBB4 408 aa12.16□□□□□ -0.46
CCDC90B-216ENST00000529856 FBXL8Q96CD0 374 aa12.16□□□□□ -0.46
CCDC90B-216ENST00000529856 CLIP3Q96DZ5 547 aa12.16□□□□□ -0.46
CCDC90B-216ENST00000529856 SLC45A3Q96JT2 553 aa12.16□□□□□ -0.46
CCDC90B-216ENST00000529856 PLCD4Q9BRC7 762 aa12.16□□□□□ -0.46
CCDC90B-216ENST00000529856 DERL2Q9GZP9 239 aa12.16□□□□□ -0.46
CCDC90B-216ENST00000529856 ATG10Q9H0Y0 220 aa12.16□□□□□ -0.46
CCDC90B-216ENST00000529856 SLC6A20Q9NP91 592 aa12.16□□□□□ -0.46
CCDC90B-216ENST00000529856 CCDC177Q9NQR7 707 aaPredicted RBP12.16□□□□□ -0.46
CCDC90B-216ENST00000529856 ENAMQ9NRM1 1142 aa12.16□□□□□ -0.46
CCDC90B-216ENST00000529856 ABCF3Q9NUQ8 709 aa12.16□□□□□ -0.46
CCDC90B-216ENST00000529856 PCMTD2Q9NV79 361 aa12.16□□□□□ -0.46
CCDC90B-216ENST00000529856 ARL15Q9NXU5 204 aa12.16□□□□□ -0.46
CCDC90B-216ENST00000529856 ANKMY1Q9P2S6 941 aa12.16□□□□□ -0.46
CCDC90B-216ENST00000529856 IL17BQ9UHF5 180 aa12.16□□□□□ -0.46
CCDC90B-216ENST00000529856 CROTQ9UKG9 612 aa12.16□□□□□ -0.46
CCDC90B-216ENST00000529856 SNX7Q9UNH6 387 aa12.16□□□□□ -0.46
CCDC90B-216ENST00000529856 HEATR5BQ9P2D3 2071 aa12.15□□□□□ -0.46
CCDC90B-216ENST00000529856 SEC16AO15027 2179 aa12.15□□□□□ -0.46
CCDC90B-216ENST00000529856 PABPN1LA6NDY0 278 aaKnown RBP12.15□□□□□ -0.46
CCDC90B-216ENST00000529856 NPEPPSL1A6NEC2 478 aa12.15□□□□□ -0.46
CCDC90B-216ENST00000529856 ZSCAN9O15535 394 aaPredicted RBP12.15□□□□□ -0.46
CCDC90B-216ENST00000529856 NRP2O60462 931 aa12.15□□□□□ -0.46
CCDC90B-216ENST00000529856 SRPX2O60687 465 aaPredicted RBP12.15□□□□□ -0.46
CCDC90B-216ENST00000529856 CCDC166P0CW27 439 aa12.15□□□□□ -0.46
CCDC90B-216ENST00000529856 TCN2P20062 427 aa12.15□□□□□ -0.46
CCDC90B-216ENST00000529856 F8A1P23610 371 aa12.15□□□□□ -0.46
CCDC90B-216ENST00000529856 CCND1P24385 295 aa12.15□□□□□ -0.46
CCDC90B-216ENST00000529856 TBPL1P62380 186 aa12.15□□□□□ -0.46
CCDC90B-216ENST00000529856 CDKL1Q00532 357 aa12.15□□□□□ -0.46
CCDC90B-216ENST00000529856 RELAQ04206 551 aa12.15□□□□□ -0.46
CCDC90B-216ENST00000529856 NAE1Q13564 534 aa12.15□□□□□ -0.46
CCDC90B-216ENST00000529856 PPP1R3AQ16821 1122 aa12.15□□□□□ -0.46
CCDC90B-216ENST00000529856 FAM199XQ6PEV8 388 aaPredicted RBP12.15□□□□□ -0.46
CCDC90B-216ENST00000529856 PAQR7Q86WK9 346 aa12.15□□□□□ -0.46
CCDC90B-216ENST00000529856 ZNF655Q8N720 491 aaPredicted RBP12.15□□□□□ -0.46
CCDC90B-216ENST00000529856 CT55Q8WUE5 264 aa12.15□□□□□ -0.46
CCDC90B-216ENST00000529856 ATL1Q8WXF7 558 aa12.15□□□□□ -0.46
CCDC90B-216ENST00000529856 MR1Q95460 341 aa12.15□□□□□ -0.46
CCDC90B-216ENST00000529856 MRRFQ96E11 262 aaKnown RBP12.15□□□□□ -0.46
CCDC90B-216ENST00000529856 UBXN10Q96LJ8 280 aa12.15□□□□□ -0.46
CCDC90B-216ENST00000529856 ZNF285Q96NJ3 590 aa12.15□□□□□ -0.46
CCDC90B-216ENST00000529856 SELENOSQ9BQE4 189 aa12.15□□□□□ -0.46
CCDC90B-216ENST00000529856 SGPP1Q9BX95 441 aa12.15□□□□□ -0.46
CCDC90B-216ENST00000529856 SLC7A5P2Q9GIP4 190 aa12.15□□□□□ -0.46
CCDC90B-216ENST00000529856 PCBD2Q9H0N5 130 aa12.15□□□□□ -0.46
CCDC90B-216ENST00000529856 UTP6Q9NYH9 597 aaKnown RBP12.15□□□□□ -0.46
CCDC90B-216ENST00000529856 CTNNAL1Q9UBT7 734 aa12.15□□□□□ -0.46
CCDC90B-216ENST00000529856 A0A0J9YVX5 310 aa12.14□□□□□ -0.47
CCDC90B-216ENST00000529856 HMX2A2RU54 273 aa12.14□□□□□ -0.47
CCDC90B-216ENST00000529856 ZNF891A8MT65 544 aaPredicted RBP12.14□□□□□ -0.47
CCDC90B-216ENST00000529856 C21orf140B9A014 251 aa12.14□□□□□ -0.47
CCDC90B-216ENST00000529856 GUCA1CO95843 209 aa12.14□□□□□ -0.47
CCDC90B-216ENST00000529856 SLC35E2BP0CK96 405 aa12.14□□□□□ -0.47
CCDC90B-216ENST00000529856 CD1DP15813 335 aa12.14□□□□□ -0.47
CCDC90B-216ENST00000529856 NPPBP16860 134 aa12.14□□□□□ -0.47
CCDC90B-216ENST00000529856 HRH2P25021 359 aa12.14□□□□□ -0.47
CCDC90B-216ENST00000529856 CRABP2P29373 138 aa12.14□□□□□ -0.47
CCDC90B-216ENST00000529856 GCGRP47871 477 aa12.14□□□□□ -0.47
CCDC90B-216ENST00000529856 ATP6V0D1P61421 351 aa12.14□□□□□ -0.47
CCDC90B-216ENST00000529856 DNASE1L3Q13609 305 aa12.14□□□□□ -0.47
CCDC90B-216ENST00000529856 TSNQ15631 228 aaKnown RBP12.14□□□□□ -0.47
CCDC90B-216ENST00000529856 TCTE1Q5JU00 501 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms