RNA–Protein interactions for RNA: ENST00000527827.1

CPSF1-202, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-202ENST00000527827 PEX13Q92968 403 aa22.48■■□□□ 1.19
CPSF1-202ENST00000527827 C10orf90Q96M02 699 aa22.48■■□□□ 1.19
CPSF1-202ENST00000527827 TAAR6Q96RI8 345 aa22.48■■□□□ 1.19
CPSF1-202ENST00000527827 UNKQ9C0B0 810 aaKnown RBP22.48■■□□□ 1.19
CPSF1-202ENST00000527827 P2RY12Q9H244 342 aa22.48■■□□□ 1.19
CPSF1-202ENST00000527827 CATSPERZQ9NTU4 200 aa22.48■■□□□ 1.19
CPSF1-202ENST00000527827 TTC7AQ9ULT0 858 aaPredicted RBP22.48■■□□□ 1.19
CPSF1-202ENST00000527827 RUVBL2Q9Y230 463 aaKnown RBP22.48■■□□□ 1.19
CPSF1-202ENST00000527827 IGLV3-12A0A075B6K2 115 aa22.47■■□□□ 1.19
CPSF1-202ENST00000527827 FTCDO95954 541 aa22.47■■□□□ 1.19
CPSF1-202ENST00000527827 SOX11P35716 441 aa22.47■■□□□ 1.19
CPSF1-202ENST00000527827 YBX1P67809 324 aaKnown RBP22.47■■□□□ 1.19
CPSF1-202ENST00000527827 VWA2Q5GFL6 755 aa22.47■■□□□ 1.19
CPSF1-202ENST00000527827 AARS2Q5JTZ9 985 aaKnown RBP22.47■■□□□ 1.19
CPSF1-202ENST00000527827 PTRHD1Q6GMV3 140 aaKnown RBP22.47■■□□□ 1.19
CPSF1-202ENST00000527827 PRUNE1Q86TP1 453 aa22.47■■□□□ 1.19
CPSF1-202ENST00000527827 KBTBD2Q8IY47 623 aa22.47■■□□□ 1.19
CPSF1-202ENST00000527827 RELTQ969Z4 430 aa22.47■■□□□ 1.19
CPSF1-202ENST00000527827 PLA2G3Q9NZ20 509 aa22.47■■□□□ 1.19
CPSF1-202ENST00000527827 ANAPC5Q9UJX4 755 aa22.47■■□□□ 1.19
CPSF1-202ENST00000527827 CPAMD8Q8IZJ3 1885 aa22.47■■□□□ 1.19
CPSF1-202ENST00000527827 HEATR5BQ9P2D3 2071 aa22.46■■□□□ 1.19
CPSF1-202ENST00000527827 PCDH17O14917 1159 aa22.46■■□□□ 1.19
CPSF1-202ENST00000527827 USP1O94782 785 aa22.46■■□□□ 1.19
CPSF1-202ENST00000527827 EIF2S1P05198 315 aaKnown RBP22.46■■□□□ 1.19
CPSF1-202ENST00000527827 PRR35P0CG20 571 aa22.46■■□□□ 1.19
CPSF1-202ENST00000527827 COX6A1P12074 109 aa22.46■■□□□ 1.19
CPSF1-202ENST00000527827 ARG2P78540 354 aa22.46■■□□□ 1.19
CPSF1-202ENST00000527827 PANX3Q96QZ0 392 aa22.46■■□□□ 1.19
CPSF1-202ENST00000527827 CHRAC1Q9NRG0 131 aa22.46■■□□□ 1.19
CPSF1-202ENST00000527827 PTGFRNQ9P2B2 879 aa22.46■■□□□ 1.19
CPSF1-202ENST00000527827 OR2A25A4D2G3 310 aa22.45■■□□□ 1.18
CPSF1-202ENST00000527827 PRSS44E7EML9 344 aa22.45■■□□□ 1.18
CPSF1-202ENST00000527827 E7EVH7 732 aa22.45■■□□□ 1.18
CPSF1-202ENST00000527827 CD3EAPO15446 510 aaKnown RBP22.45■■□□□ 1.18
CPSF1-202ENST00000527827 LIASO43766 372 aa22.45■■□□□ 1.18
CPSF1-202ENST00000527827 IFNB1P01574 187 aa22.45■■□□□ 1.18
CPSF1-202ENST00000527827 ETS1P14921 441 aa22.45■■□□□ 1.18
CPSF1-202ENST00000527827 FBLP22087 321 aaKnown RBP22.45■■□□□ 1.18
CPSF1-202ENST00000527827 TTPAP49638 278 aa22.45■■□□□ 1.18
CPSF1-202ENST00000527827 TNFSF10P50591 281 aa22.45■■□□□ 1.18
CPSF1-202ENST00000527827 KCNK10P57789 538 aa22.45■■□□□ 1.18
CPSF1-202ENST00000527827 MUM1Q2TAK8 710 aa22.45■■□□□ 1.18
CPSF1-202ENST00000527827 PRTGQ2VWP7 1150 aa22.45■■□□□ 1.18
CPSF1-202ENST00000527827 FBXO42Q6P3S6 717 aa22.45■■□□□ 1.18
CPSF1-202ENST00000527827 NDUFAF7Q7L592 441 aa22.45■■□□□ 1.18
CPSF1-202ENST00000527827 SYCE1Q8N0S2 351 aa22.45■■□□□ 1.18
CPSF1-202ENST00000527827 GSDMBQ8TAX9 411 aa22.45■■□□□ 1.18
CPSF1-202ENST00000527827 BRIX1Q8TDN6 353 aaKnown RBP22.45■■□□□ 1.18
CPSF1-202ENST00000527827 SKA2Q8WVK7 121 aaPredicted RBP22.45■■□□□ 1.18
CPSF1-202ENST00000527827 MRFAP1L1Q96HT8 127 aa22.45■■□□□ 1.18
CPSF1-202ENST00000527827 HES6Q96HZ4 224 aa22.45■■□□□ 1.18
CPSF1-202ENST00000527827 MAGEB10Q96LZ2 347 aaPredicted RBP22.45■■□□□ 1.18
CPSF1-202ENST00000527827 COPG2Q9UBF2 871 aa22.45■■□□□ 1.18
CPSF1-202ENST00000527827 GNPTGQ9UJJ9 305 aa22.45■■□□□ 1.18
CPSF1-202ENST00000527827 OTOGQ6ZRI0 2925 aa22.45■■□□□ 1.18
CPSF1-202ENST00000527827 NSG1A0A0A6YYJ2 146 aa22.44■■□□□ 1.18
CPSF1-202ENST00000527827 A0A0U1RQJ8 604 aa22.44■■□□□ 1.18
CPSF1-202ENST00000527827 A0A1W2PQ72 361 aa22.44■■□□□ 1.18
CPSF1-202ENST00000527827 RPS3P23396 243 aaKnown RBP eCLIP22.44■■□□□ 1.18
CPSF1-202ENST00000527827 ELAVL4P26378 380 aaKnown RBP22.44■■□□□ 1.18
CPSF1-202ENST00000527827 FASTKQ14296 549 aaKnown RBP22.44■■□□□ 1.18
CPSF1-202ENST00000527827 CNSTQ6PJW8 725 aa22.44■■□□□ 1.18
CPSF1-202ENST00000527827 RAB42Q8N4Z0 105 aa22.44■■□□□ 1.18
CPSF1-202ENST00000527827 SIRT6Q8N6T7 355 aa22.44■■□□□ 1.18
CPSF1-202ENST00000527827 PPHLN1Q8NEY8 458 aaKnown RBP22.44■■□□□ 1.18
CPSF1-202ENST00000527827 NR4A3Q92570 626 aa22.44■■□□□ 1.18
CPSF1-202ENST00000527827 HAS2Q92819 552 aa22.44■■□□□ 1.18
CPSF1-202ENST00000527827 ZFYVE21Q9BQ24 234 aa22.44■■□□□ 1.18
CPSF1-202ENST00000527827 DPH7Q9BTV6 452 aa22.44■■□□□ 1.18
CPSF1-202ENST00000527827 SYNPO2LQ9H987 977 aa22.44■■□□□ 1.18
CPSF1-202ENST00000527827 RAB6BQ9NRW1 208 aa22.44■■□□□ 1.18
CPSF1-202ENST00000527827 MRFAP1Q9Y605 127 aa22.44■■□□□ 1.18
CPSF1-202ENST00000527827 TRAV17A0A0B4J275 112 aa22.43■■□□□ 1.18
CPSF1-202ENST00000527827 DYTNA2CJ06 578 aa22.43■■□□□ 1.18
CPSF1-202ENST00000527827 IDSB3KWA1 339 aa22.43■■□□□ 1.18
CPSF1-202ENST00000527827 H0YGG7 62 aa22.43■■□□□ 1.18
CPSF1-202ENST00000527827 FFAR3O14843 346 aa22.43■■□□□ 1.18
CPSF1-202ENST00000527827 KPNA5O15131 536 aa22.43■■□□□ 1.18
CPSF1-202ENST00000527827 GPR42O15529 346 aa22.43■■□□□ 1.18
CPSF1-202ENST00000527827 SERPINA7P05543 415 aa22.43■■□□□ 1.18
CPSF1-202ENST00000527827 CELA2AP08217 269 aa22.43■■□□□ 1.18
CPSF1-202ENST00000527827 CCNFP41002 786 aa22.43■■□□□ 1.18
CPSF1-202ENST00000527827 EMP2P54851 167 aa22.43■■□□□ 1.18
CPSF1-202ENST00000527827 ARF3P61204 181 aaPredicted RBP22.43■■□□□ 1.18
CPSF1-202ENST00000527827 PCID2Q5JVF3 399 aa22.43■■□□□ 1.18
CPSF1-202ENST00000527827 OTOAQ7RTW8 1153 aa22.43■■□□□ 1.18
CPSF1-202ENST00000527827 KIAA1328Q86T90 577 aa22.43■■□□□ 1.18
CPSF1-202ENST00000527827 TREX1Q9NSU2 369 aa22.43■■□□□ 1.18
CPSF1-202ENST00000527827 SPATA7Q9P0W8 599 aa22.43■■□□□ 1.18
CPSF1-202ENST00000527827 FBN2P35556 2912 aa22.42■■□□□ 1.18
CPSF1-202ENST00000527827 IGHV1-45A0A0A0MS14 117 aa22.42■■□□□ 1.18
CPSF1-202ENST00000527827 APRTP07741 180 aa22.42■■□□□ 1.18
CPSF1-202ENST00000527827 ERVK-10P10266 1014 aa22.42■■□□□ 1.18
CPSF1-202ENST00000527827 POU3F2P20265 443 aaPredicted RBP22.42■■□□□ 1.18
CPSF1-202ENST00000527827 FDXRP22570 491 aa22.42■■□□□ 1.18
CPSF1-202ENST00000527827 EMP3P54852 163 aa22.42■■□□□ 1.18
CPSF1-202ENST00000527827 EEF1A2Q05639 463 aaKnown RBP22.42■■□□□ 1.18
CPSF1-202ENST00000527827 DSG2Q14126 1118 aa22.42■■□□□ 1.18
CPSF1-202ENST00000527827 INAQ16352 499 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms