RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 ERRFI1Q9UJM3 462 aaPredicted RBP21.39■■□□□ 1.01
TRAPPC4-208ENST00000527680 SLC5A6Q9Y289 635 aa21.39■■□□□ 1.01
TRAPPC4-208ENST00000527680 ZKSCAN5Q9Y2L8 839 aa21.39■■□□□ 1.01
TRAPPC4-208ENST00000527680 PCDHGA10Q9Y5H3 936 aa21.39■■□□□ 1.01
TRAPPC4-208ENST00000527680 H3BMM5 538 aa21.38■■□□□ 1.01
TRAPPC4-208ENST00000527680 NIPSNAP2O75323 286 aa21.38■■□□□ 1.01
TRAPPC4-208ENST00000527680 CARSP49589 748 aaKnown RBP21.38■■□□□ 1.01
TRAPPC4-208ENST00000527680 SARNPP82979 210 aaKnown RBP21.38■■□□□ 1.01
TRAPPC4-208ENST00000527680 FASTKQ14296 549 aaKnown RBP21.38■■□□□ 1.01
TRAPPC4-208ENST00000527680 NAA25Q14CX7 972 aa21.38■■□□□ 1.01
TRAPPC4-208ENST00000527680 ANKRD20A4Q4UJ75 823 aa21.38■■□□□ 1.01
TRAPPC4-208ENST00000527680 RNF187Q5TA31 235 aaPredicted RBP21.38■■□□□ 1.01
TRAPPC4-208ENST00000527680 CASC4Q6P4E1 433 aa21.38■■□□□ 1.01
TRAPPC4-208ENST00000527680 OR9A1PQ8NGU1 263 aa21.38■■□□□ 1.01
TRAPPC4-208ENST00000527680 STT3BQ8TCJ2 826 aa21.38■■□□□ 1.01
TRAPPC4-208ENST00000527680 BIRC8Q96P09 236 aa21.38■■□□□ 1.01
TRAPPC4-208ENST00000527680 TCF12Q99081 682 aa21.38■■□□□ 1.01
TRAPPC4-208ENST00000527680 DPH7Q9BTV6 452 aa21.38■■□□□ 1.01
TRAPPC4-208ENST00000527680 EPS8L2Q9H6S3 715 aa21.38■■□□□ 1.01
TRAPPC4-208ENST00000527680 SPATA7Q9P0W8 599 aa21.38■■□□□ 1.01
TRAPPC4-208ENST00000527680 ZNF282Q9UDV7 671 aaPredicted RBP21.38■■□□□ 1.01
TRAPPC4-208ENST00000527680 CSAG2Q9Y5P2 127 aa21.38■■□□□ 1.01
TRAPPC4-208ENST00000527680 NUP210LQ5VU65 1888 aa21.37■■□□□ 1.01
TRAPPC4-208ENST00000527680 VSTM2BA6NLU5 285 aa21.37■■□□□ 1.01
TRAPPC4-208ENST00000527680 E5RI56 91 aa21.37■■□□□ 1.01
TRAPPC4-208ENST00000527680 CEP104O60308 925 aa21.37■■□□□ 1.01
TRAPPC4-208ENST00000527680 ESR1P03372 595 aa21.37■■□□□ 1.01
TRAPPC4-208ENST00000527680 RPA3P35244 121 aaPredicted RBP21.37■■□□□ 1.01
TRAPPC4-208ENST00000527680 CDK16Q00536 496 aa21.37■■□□□ 1.01
TRAPPC4-208ENST00000527680 KLC1Q07866 573 aa21.37■■□□□ 1.01
TRAPPC4-208ENST00000527680 CDC16Q13042 620 aa21.37■■□□□ 1.01
TRAPPC4-208ENST00000527680 TRIP13Q15645 432 aaPredicted RBP21.37■■□□□ 1.01
TRAPPC4-208ENST00000527680 KCTD19Q17RG1 926 aaPredicted RBP21.37■■□□□ 1.01
TRAPPC4-208ENST00000527680 MUM1Q2TAK8 710 aa21.37■■□□□ 1.01
TRAPPC4-208ENST00000527680 CRB2Q5IJ48 1285 aa21.37■■□□□ 1.01
TRAPPC4-208ENST00000527680 PRMT9Q6P2P2 845 aa21.37■■□□□ 1.01
TRAPPC4-208ENST00000527680 FBXO42Q6P3S6 717 aa21.37■■□□□ 1.01
TRAPPC4-208ENST00000527680 OR11G2Q8NGC1 345 aa21.37■■□□□ 1.01
TRAPPC4-208ENST00000527680 PPP4R1Q8TF05 950 aa21.37■■□□□ 1.01
TRAPPC4-208ENST00000527680 LPGAT1Q92604 370 aa21.37■■□□□ 1.01
TRAPPC4-208ENST00000527680 CABS1Q96KC9 395 aa21.37■■□□□ 1.01
TRAPPC4-208ENST00000527680 ZFYVE21Q9BQ24 234 aa21.37■■□□□ 1.01
TRAPPC4-208ENST00000527680 MRPS30Q9NP92 439 aaKnown RBP21.37■■□□□ 1.01
TRAPPC4-208ENST00000527680 HOMER3Q9NSC5 361 aa21.37■■□□□ 1.01
TRAPPC4-208ENST00000527680 SOX13Q9UN79 622 aa21.37■■□□□ 1.01
TRAPPC4-208ENST00000527680 NOVA2Q9UNW9 492 aaKnown RBP21.37■■□□□ 1.01
TRAPPC4-208ENST00000527680 NTNG1Q9Y2I2 539 aa21.37■■□□□ 1.01
TRAPPC4-208ENST00000527680 CACNA1DQ01668 2161 aa21.36■■□□□ 1.01
TRAPPC4-208ENST00000527680 A0A1W2PPV9 198 aa21.36■■□□□ 1.01
TRAPPC4-208ENST00000527680 NRP2O60462 931 aa21.36■■□□□ 1.01
TRAPPC4-208ENST00000527680 MATN4O95460 622 aa21.36■■□□□ 1.01
TRAPPC4-208ENST00000527680 ZGLP1P0C6A0 271 aa21.36■■□□□ 1.01
TRAPPC4-208ENST00000527680 PAMP19021 973 aa21.36■■□□□ 1.01
TRAPPC4-208ENST00000527680 ARNTP27540 789 aa21.36■■□□□ 1.01
TRAPPC4-208ENST00000527680 YBX1P67809 324 aaKnown RBP21.36■■□□□ 1.01
TRAPPC4-208ENST00000527680 SUSD1Q6UWL2 747 aa21.36■■□□□ 1.01
TRAPPC4-208ENST00000527680 LINC00696Q6ZRV3 163 aa21.36■■□□□ 1.01
TRAPPC4-208ENST00000527680 MAMDC2Q7Z304 686 aaPredicted RBP21.36■■□□□ 1.01
TRAPPC4-208ENST00000527680 SMPDL3AQ92484 453 aa21.36■■□□□ 1.01
TRAPPC4-208ENST00000527680 ENAMQ9NRM1 1142 aa21.36■■□□□ 1.01
TRAPPC4-208ENST00000527680 ABCF3Q9NUQ8 709 aa21.36■■□□□ 1.01
TRAPPC4-208ENST00000527680 C3orf18Q9UK00 162 aa21.36■■□□□ 1.01
TRAPPC4-208ENST00000527680 CDC14AQ9UNH5 594 aa21.36■■□□□ 1.01
TRAPPC4-208ENST00000527680 KLK4Q9Y5K2 254 aa21.36■■□□□ 1.01
TRAPPC4-208ENST00000527680 TCRBV7S3A2A0A539 114 aa21.35■■□□□ 1.01
TRAPPC4-208ENST00000527680 H0YGG7 62 aa21.35■■□□□ 1.01
TRAPPC4-208ENST00000527680 MAP2K7O14733 419 aa21.35■■□□□ 1.01
TRAPPC4-208ENST00000527680 AVILO75366 819 aa21.35■■□□□ 1.01
TRAPPC4-208ENST00000527680 VPS26AO75436 327 aa21.35■■□□□ 1.01
TRAPPC4-208ENST00000527680 MED26O95402 600 aa21.35■■□□□ 1.01
TRAPPC4-208ENST00000527680 ACPPP15309 386 aa21.35■■□□□ 1.01
TRAPPC4-208ENST00000527680 TPSB2P20231 275 aa21.35■■□□□ 1.01
TRAPPC4-208ENST00000527680 FBLP22087 321 aaKnown RBP21.35■■□□□ 1.01
TRAPPC4-208ENST00000527680 COL8A1P27658 744 aa21.35■■□□□ 1.01
TRAPPC4-208ENST00000527680 VPS41P49754 854 aa21.35■■□□□ 1.01
TRAPPC4-208ENST00000527680 ARF3P61204 181 aaPredicted RBP21.35■■□□□ 1.01
TRAPPC4-208ENST00000527680 TPSAB1Q15661 275 aa21.35■■□□□ 1.01
TRAPPC4-208ENST00000527680 TYSND1Q2T9J0 566 aa21.35■■□□□ 1.01
TRAPPC4-208ENST00000527680 KLHL38Q2WGJ6 581 aa21.35■■□□□ 1.01
TRAPPC4-208ENST00000527680 ACSBG2Q5FVE4 666 aa21.35■■□□□ 1.01
TRAPPC4-208ENST00000527680 VWA2Q5GFL6 755 aa21.35■■□□□ 1.01
TRAPPC4-208ENST00000527680 ISLR2Q6UXK2 745 aa21.35■■□□□ 1.01
TRAPPC4-208ENST00000527680 LURAP1LQ8IV03 231 aa21.35■■□□□ 1.01
TRAPPC4-208ENST00000527680 COG1Q8WTW3 980 aa21.35■■□□□ 1.01
TRAPPC4-208ENST00000527680 ZNF160Q9HCG1 818 aa21.35■■□□□ 1.01
TRAPPC4-208ENST00000527680 FAM114A2Q9NRY5 505 aa21.35■■□□□ 1.01
TRAPPC4-208ENST00000527680 SAMD15Q9P1V8 674 aa21.35■■□□□ 1.01
TRAPPC4-208ENST00000527680 GALPQ9UBC7 116 aa21.35■■□□□ 1.01
TRAPPC4-208ENST00000527680 NOTCH2Q04721 2471 aa21.34■■□□□ 1.01
TRAPPC4-208ENST00000527680 OR2A25A4D2G3 310 aa21.34■■□□□ 1.01
TRAPPC4-208ENST00000527680 HPP00738 406 aa21.34■■□□□ 1.01
TRAPPC4-208ENST00000527680 LDLRP01130 860 aa21.34■■□□□ 1.01
TRAPPC4-208ENST00000527680 CATP04040 527 aaKnown RBP21.34■■□□□ 1.01
TRAPPC4-208ENST00000527680 PKMP14618 531 aaKnown RBP21.34■■□□□ 1.01
TRAPPC4-208ENST00000527680 CXCR2P25025 360 aa21.34■■□□□ 1.01
TRAPPC4-208ENST00000527680 CXCR5P32302 372 aa21.34■■□□□ 1.01
TRAPPC4-208ENST00000527680 ZNF169Q14929 603 aaPredicted RBP21.34■■□□□ 1.01
TRAPPC4-208ENST00000527680 TLR1Q15399 786 aa21.34■■□□□ 1.01
TRAPPC4-208ENST00000527680 NEPROQ6NW34 567 aa21.34■■□□□ 1.01
TRAPPC4-208ENST00000527680 IGFL2Q6UWQ7 119 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms