RNA–Protein interactions for RNA: ENST00000526704.6

LINC01001-201, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 2,553 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-201ENST00000526704 KRT87PA6NCN2 255 aa11.33□□□□□ -0.6
LINC01001-201ENST00000526704 CLDN25C9JDP6 229 aa11.33□□□□□ -0.6
LINC01001-201ENST00000526704 PRAMEF4O60810 478 aa11.33□□□□□ -0.6
LINC01001-201ENST00000526704 SERPINB7O75635 380 aa11.33□□□□□ -0.6
LINC01001-201ENST00000526704 ABLIM3O94929 683 aa11.33□□□□□ -0.6
LINC01001-201ENST00000526704 TAF12Q16514 161 aa11.33□□□□□ -0.6
LINC01001-201ENST00000526704 CYP2A13Q16696 494 aa11.33□□□□□ -0.6
LINC01001-201ENST00000526704 ADPRMQ3LIE5 342 aa11.33□□□□□ -0.6
LINC01001-201ENST00000526704 PRAMEF9Q5VWM5 478 aa11.33□□□□□ -0.6
LINC01001-201ENST00000526704 RETSATQ6NUM9 610 aa11.33□□□□□ -0.6
LINC01001-201ENST00000526704 NEK5Q6P3R8 708 aa11.33□□□□□ -0.6
LINC01001-201ENST00000526704 CRTC1Q6UUV9 634 aa11.33□□□□□ -0.6
LINC01001-201ENST00000526704 MSANTD1Q6ZTZ1 278 aa11.33□□□□□ -0.6
LINC01001-201ENST00000526704 SLCO6A1Q86UG4 719 aa11.33□□□□□ -0.6
LINC01001-201ENST00000526704 ZZZ3Q8IYH5 903 aa11.33□□□□□ -0.6
LINC01001-201ENST00000526704 APOLD1Q96LR9 279 aa11.33□□□□□ -0.6
LINC01001-201ENST00000526704 ALPK1Q96QP1 1244 aa11.33□□□□□ -0.6
LINC01001-201ENST00000526704 BCL7BQ9BQE9 202 aa11.33□□□□□ -0.6
LINC01001-201ENST00000526704 NEURL2Q9BR09 285 aa11.33□□□□□ -0.6
LINC01001-201ENST00000526704 ATP13A3Q9H7F0 1226 aa11.33□□□□□ -0.6
LINC01001-201ENST00000526704 IL1RAPQ9NPH3 570 aa11.33□□□□□ -0.6
LINC01001-201ENST00000526704 STARD7Q9NQZ5 370 aa11.33□□□□□ -0.6
LINC01001-201ENST00000526704 ZDHHC3Q9NYG2 299 aa11.33□□□□□ -0.6
LINC01001-201ENST00000526704 ERVW-1Q9UQF0 538 aa11.33□□□□□ -0.6
LINC01001-201ENST00000526704 HELZP42694 1942 aaKnown RBP11.33□□□□□ -0.6
LINC01001-201ENST00000526704 ALPK3Q96L96 1907 aa11.33□□□□□ -0.6
LINC01001-201ENST00000526704 PLXNA2O75051 1894 aa11.33□□□□□ -0.6
LINC01001-201ENST00000526704 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.32□□□□□ -0.6
LINC01001-201ENST00000526704 NPIPB8E9PQR5 432 aa11.32□□□□□ -0.6
LINC01001-201ENST00000526704 hCG_2039718K7EN88 272 aa11.32□□□□□ -0.6
LINC01001-201ENST00000526704 TOR1BO14657 336 aa11.32□□□□□ -0.6
LINC01001-201ENST00000526704 DIRAS1O95057 198 aa11.32□□□□□ -0.6
LINC01001-201ENST00000526704 AMD1P17707 334 aa11.32□□□□□ -0.6
LINC01001-201ENST00000526704 MAPK1P28482 360 aa11.32□□□□□ -0.6
LINC01001-201ENST00000526704 HOXA9P31269 272 aa11.32□□□□□ -0.6
LINC01001-201ENST00000526704 CSNK1DP48730 415 aa11.32□□□□□ -0.6
LINC01001-201ENST00000526704 VLDLRP98155 873 aa11.32□□□□□ -0.6
LINC01001-201ENST00000526704 MTAPQ13126 283 aa11.32□□□□□ -0.6
LINC01001-201ENST00000526704 NPTX1Q15818 432 aa11.32□□□□□ -0.6
LINC01001-201ENST00000526704 ATP13A5Q4VNC0 1218 aa11.32□□□□□ -0.6
LINC01001-201ENST00000526704 TTC23LQ6PF05 361 aa11.32□□□□□ -0.6
LINC01001-201ENST00000526704 GPR155Q7Z3F1 870 aa11.32□□□□□ -0.6
LINC01001-201ENST00000526704 FAM9CQ8IZT9 166 aa11.32□□□□□ -0.6
LINC01001-201ENST00000526704 RNF175Q8N4F7 328 aa11.32□□□□□ -0.6
LINC01001-201ENST00000526704 L3MBTL4Q8NA19 623 aa11.32□□□□□ -0.6
LINC01001-201ENST00000526704 RORBQ92753 470 aa11.32□□□□□ -0.6
LINC01001-201ENST00000526704 PYCR2Q96C36 320 aa11.32□□□□□ -0.6
LINC01001-201ENST00000526704 LYSMD1Q96S90 227 aa11.32□□□□□ -0.6
LINC01001-201ENST00000526704 MYOCQ99972 504 aa11.32□□□□□ -0.6
LINC01001-201ENST00000526704 YIPF2Q9BWQ6 316 aa11.32□□□□□ -0.6
LINC01001-201ENST00000526704 EBPLQ9BY08 206 aa11.32□□□□□ -0.6
LINC01001-201ENST00000526704 TRNAU1APQ9NX07 287 aaKnown RBP11.32□□□□□ -0.6
LINC01001-201ENST00000526704 CLEC4EQ9ULY5 219 aa11.32□□□□□ -0.6
LINC01001-201ENST00000526704 TMED5Q9Y3A6 229 aa11.32□□□□□ -0.6
LINC01001-201ENST00000526704 CPQQ9Y646 472 aa11.32□□□□□ -0.6
LINC01001-201ENST00000526704 MYO1GB0I1T2 1018 aa11.32□□□□□ -0.6
LINC01001-201ENST00000526704 SLC22A1O15245 554 aa11.32□□□□□ -0.6
LINC01001-201ENST00000526704 HOXA2O43364 376 aa11.32□□□□□ -0.6
LINC01001-201ENST00000526704 MT-ND2P03891 347 aa11.32□□□□□ -0.6
LINC01001-201ENST00000526704 CDH3P22223 829 aa11.32□□□□□ -0.6
LINC01001-201ENST00000526704 AOAHP28039 575 aa11.32□□□□□ -0.6
LINC01001-201ENST00000526704 ALDH4A1P30038 563 aa11.32□□□□□ -0.6
LINC01001-201ENST00000526704 HPCAL1P37235 193 aa11.32□□□□□ -0.6
LINC01001-201ENST00000526704 MAPK8P45983 427 aa11.32□□□□□ -0.6
LINC01001-201ENST00000526704 TM4SF4P48230 202 aa11.32□□□□□ -0.6
LINC01001-201ENST00000526704 IL1RL1Q01638 556 aa11.32□□□□□ -0.6
LINC01001-201ENST00000526704 OCA2Q04671 838 aa11.32□□□□□ -0.6
LINC01001-201ENST00000526704 PTCHD3Q3KNS1 767 aa11.32□□□□□ -0.6
LINC01001-201ENST00000526704 DGKKQ5KSL6 1271 aa11.32□□□□□ -0.6
LINC01001-201ENST00000526704 LRRC66Q68CR7 880 aa11.32□□□□□ -0.6
LINC01001-201ENST00000526704 ZCCHC8Q6NZY4 707 aaKnown RBP11.32□□□□□ -0.6
LINC01001-201ENST00000526704 RFLNAQ6ZTI6 216 aa11.32□□□□□ -0.6
LINC01001-201ENST00000526704 VTCN1Q7Z7D3 282 aa11.32□□□□□ -0.6
LINC01001-201ENST00000526704 VRK3Q8IV63 474 aa11.32□□□□□ -0.6
LINC01001-201ENST00000526704 HOMEZQ8IX15 550 aa11.32□□□□□ -0.6
LINC01001-201ENST00000526704 FAM217AQ8IXS0 508 aa11.32□□□□□ -0.6
LINC01001-201ENST00000526704 PGBD3Q8N328 593 aa11.32□□□□□ -0.6
LINC01001-201ENST00000526704 ELMOD1Q8N336 334 aa11.32□□□□□ -0.6
LINC01001-201ENST00000526704 OR7A2PQ8NGA2 310 aa11.32□□□□□ -0.6
LINC01001-201ENST00000526704 ZNF461Q8TAF7 563 aa11.32□□□□□ -0.6
LINC01001-201ENST00000526704 ZFP90Q8TF47 636 aa11.32□□□□□ -0.6
LINC01001-201ENST00000526704 VMP1Q96GC9 406 aa11.32□□□□□ -0.6
LINC01001-201ENST00000526704 FCRL1Q96LA6 429 aa11.32□□□□□ -0.6
LINC01001-201ENST00000526704 ZNF300Q96RE9 604 aaPredicted RBP11.32□□□□□ -0.6
LINC01001-201ENST00000526704 BTBD2Q9BX70 525 aa11.32□□□□□ -0.6
LINC01001-201ENST00000526704 SLC12A9Q9BXP2 914 aa11.32□□□□□ -0.6
LINC01001-201ENST00000526704 WDR12Q9GZL7 423 aaKnown RBP11.32□□□□□ -0.6
LINC01001-201ENST00000526704 REXO4Q9GZR2 422 aaKnown RBP11.32□□□□□ -0.6
LINC01001-201ENST00000526704 HMG20AQ9NP66 347 aa11.32□□□□□ -0.6
LINC01001-201ENST00000526704 AASDHPPTQ9NRN7 309 aa11.32□□□□□ -0.6
LINC01001-201ENST00000526704 KLHL42Q9P2K6 505 aa11.32□□□□□ -0.6
LINC01001-201ENST00000526704 HSPE1-MOB4S4R3N1 261 aa11.32□□□□□ -0.6
LINC01001-201ENST00000526704 PMF1-BGLAPU3KQ54 211 aa11.32□□□□□ -0.6
LINC01001-201ENST00000526704 COL4A6Q14031 1691 aa11.32□□□□□ -0.6
LINC01001-201ENST00000526704 KCNK5O95279 499 aa11.31□□□□□ -0.6
LINC01001-201ENST00000526704 IGSF6O95976 241 aa11.31□□□□□ -0.6
LINC01001-201ENST00000526704 FABP3P05413 133 aa11.31□□□□□ -0.6
LINC01001-201ENST00000526704 ACPPP15309 386 aa11.31□□□□□ -0.6
LINC01001-201ENST00000526704 ENGP17813 658 aa11.31□□□□□ -0.6
LINC01001-201ENST00000526704 FPR1P21462 350 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms