RNA–Protein interactions for RNA: ENST00000526054.5

VPS28-204, Transcript of VPS28, ESCRT-I subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS28, Length 892 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-204ENST00000526054 LRRK2Q5S007 2527 aa9.77□□□□□ -0.85
VPS28-204ENST00000526054 EXOC1LA0A1B0GW35 172 aa9.77□□□□□ -0.85
VPS28-204ENST00000526054 CLEC18AA5D8T8 446 aa9.77□□□□□ -0.85
VPS28-204ENST00000526054 ZNF839A8K0R7 811 aa9.77□□□□□ -0.85
VPS28-204ENST00000526054 ARHGEF33A8MVX0 844 aa9.77□□□□□ -0.85
VPS28-204ENST00000526054 C2orf74A8MZ97 194 aa9.77□□□□□ -0.85
VPS28-204ENST00000526054 BTN3A1O00481 513 aa9.77□□□□□ -0.85
VPS28-204ENST00000526054 RASGRF2O14827 1237 aa9.77□□□□□ -0.85
VPS28-204ENST00000526054 SLC16A5O15375 505 aa9.77□□□□□ -0.85
VPS28-204ENST00000526054 ZBTB14O43829 449 aa9.77□□□□□ -0.85
VPS28-204ENST00000526054 CPNE3O75131 537 aaKnown RBP9.77□□□□□ -0.85
VPS28-204ENST00000526054 DNAJB5O75953 348 aa9.77□□□□□ -0.85
VPS28-204ENST00000526054 RECKO95980 971 aa9.77□□□□□ -0.85
VPS28-204ENST00000526054 NTRK1P04629 796 aa9.77□□□□□ -0.85
VPS28-204ENST00000526054 FAM153BP0C7A2 387 aa9.77□□□□□ -0.85
VPS28-204ENST00000526054 MYBL2P10244 700 aa9.77□□□□□ -0.85
VPS28-204ENST00000526054 STMN1P16949 149 aa9.77□□□□□ -0.85
VPS28-204ENST00000526054 POLR2CP19387 275 aaPredicted RBP9.77□□□□□ -0.85
VPS28-204ENST00000526054 CYP2A7P20853 494 aa9.77□□□□□ -0.85
VPS28-204ENST00000526054 SERPINB9P50453 376 aa9.77□□□□□ -0.85
VPS28-204ENST00000526054 RPS18P62269 152 aaKnown RBP9.77□□□□□ -0.85
VPS28-204ENST00000526054 HSD11B2P80365 405 aa9.77□□□□□ -0.85
VPS28-204ENST00000526054 FAM153CQ494X1 144 aa9.77□□□□□ -0.85
VPS28-204ENST00000526054 UBAP2Q5T6F2 1119 aaKnown RBP9.77□□□□□ -0.85
VPS28-204ENST00000526054 WDR93Q6P2C0 686 aa9.77□□□□□ -0.85
VPS28-204ENST00000526054 CLEC18BQ6UXF7 455 aa9.77□□□□□ -0.85
VPS28-204ENST00000526054 SYVN1Q86TM6 617 aa9.77□□□□□ -0.85
VPS28-204ENST00000526054 BPHLQ86WA6 291 aaPredicted RBP9.77□□□□□ -0.85
VPS28-204ENST00000526054 TMEM126BQ8IUX1 230 aa9.77□□□□□ -0.85
VPS28-204ENST00000526054 APLFQ8IW19 511 aaPredicted RBP9.77□□□□□ -0.85
VPS28-204ENST00000526054 CARFQ8N187 725 aa9.77□□□□□ -0.85
VPS28-204ENST00000526054 FAM26EQ8N5C1 309 aa9.77□□□□□ -0.85
VPS28-204ENST00000526054 CLEC18CQ8NCF0 446 aa9.77□□□□□ -0.85
VPS28-204ENST00000526054 FBXO15Q8NCQ5 510 aaPredicted RBP9.77□□□□□ -0.85
VPS28-204ENST00000526054 OR9A1PQ8NGU1 263 aa9.77□□□□□ -0.85
VPS28-204ENST00000526054 EEF1AKMT1Q8WVE0 214 aa9.77□□□□□ -0.85
VPS28-204ENST00000526054 ASB11Q8WXH4 323 aa9.77□□□□□ -0.85
VPS28-204ENST00000526054 MRRFQ96E11 262 aaKnown RBP9.77□□□□□ -0.85
VPS28-204ENST00000526054 RUFY1Q96T51 708 aa9.77□□□□□ -0.85
VPS28-204ENST00000526054 GPR87Q9BY21 358 aa9.77□□□□□ -0.85
VPS28-204ENST00000526054 TXLNGYQ9BZA5 131 aa9.77□□□□□ -0.85
VPS28-204ENST00000526054 GPAMQ9HCL2 828 aa9.77□□□□□ -0.85
VPS28-204ENST00000526054 SOHLH2Q9NX45 425 aa9.77□□□□□ -0.85
VPS28-204ENST00000526054 POMT2Q9UKY4 750 aa9.77□□□□□ -0.85
VPS28-204ENST00000526054 MTO1Q9Y2Z2 717 aaKnown RBP9.77□□□□□ -0.85
VPS28-204ENST00000526054 SNRNP200O75643 2136 aaKnown RBP9.77□□□□□ -0.85
VPS28-204ENST00000526054 PCM1Q15154 2024 aa9.77□□□□□ -0.85
VPS28-204ENST00000526054 POC1B-GALNT4F8VUJ3 575 aa9.76□□□□□ -0.85
VPS28-204ENST00000526054 MYO1CO00159 1063 aa9.76□□□□□ -0.85
VPS28-204ENST00000526054 BTN3A3O00478 584 aa9.76□□□□□ -0.85
VPS28-204ENST00000526054 RIPK2O43353 540 aa9.76□□□□□ -0.85
VPS28-204ENST00000526054 SCRG1O75711 98 aa9.76□□□□□ -0.85
VPS28-204ENST00000526054 FAM155BO75949 473 aa9.76□□□□□ -0.85
VPS28-204ENST00000526054 ZBTB11O95625 1053 aaPredicted RBP9.76□□□□□ -0.85
VPS28-204ENST00000526054 TSPAN12O95859 305 aa9.76□□□□□ -0.85
VPS28-204ENST00000526054 SYF2O95926 243 aaKnown RBP9.76□□□□□ -0.85
VPS28-204ENST00000526054 PDGFAP04085 211 aa9.76□□□□□ -0.85
VPS28-204ENST00000526054 CHRM5P08912 532 aaPredicted RBP9.76□□□□□ -0.85
VPS28-204ENST00000526054 HIST1H2AGP0C0S8 130 aaPredicted RBP9.76□□□□□ -0.85
VPS28-204ENST00000526054 HIST1H2ADP20671 130 aa9.76□□□□□ -0.85
VPS28-204ENST00000526054 CDH3P22223 829 aa9.76□□□□□ -0.85
VPS28-204ENST00000526054 PTPN4P29074 926 aa9.76□□□□□ -0.85
VPS28-204ENST00000526054 HSD17B2P37059 387 aa9.76□□□□□ -0.85
VPS28-204ENST00000526054 MSH2P43246 934 aa9.76□□□□□ -0.85
VPS28-204ENST00000526054 CD97P48960 835 aa9.76□□□□□ -0.85
VPS28-204ENST00000526054 MLLT10P55197 1068 aa9.76□□□□□ -0.85
VPS28-204ENST00000526054 RAB10P61026 200 aa9.76□□□□□ -0.85
VPS28-204ENST00000526054 VSNL1P62760 191 aa9.76□□□□□ -0.85
VPS28-204ENST00000526054 RPS15P62841 145 aaKnown RBP9.76□□□□□ -0.85
VPS28-204ENST00000526054 IL10RAQ13651 578 aa9.76□□□□□ -0.85
VPS28-204ENST00000526054 GRB7Q14451 532 aa9.76□□□□□ -0.85
VPS28-204ENST00000526054 ZNF460Q14592 562 aa9.76□□□□□ -0.85
VPS28-204ENST00000526054 KIR2DS3Q14952 304 aa9.76□□□□□ -0.85
VPS28-204ENST00000526054 ARHGAP19Q14CB8 494 aa9.76□□□□□ -0.85
VPS28-204ENST00000526054 GPR19Q15760 415 aa9.76□□□□□ -0.85
VPS28-204ENST00000526054 ZKSCAN8Q15776 578 aaPredicted RBP9.76□□□□□ -0.85
VPS28-204ENST00000526054 UGT8Q16880 541 aa9.76□□□□□ -0.85
VPS28-204ENST00000526054 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.76□□□□□ -0.85
VPS28-204ENST00000526054 TMTC4Q5T4D3 741 aa9.76□□□□□ -0.85
VPS28-204ENST00000526054 CPZQ66K79 652 aa9.76□□□□□ -0.85
VPS28-204ENST00000526054 FAM199XQ6PEV8 388 aaPredicted RBP9.76□□□□□ -0.85
VPS28-204ENST00000526054 CYHR1Q6ZMK1 362 aa9.76□□□□□ -0.85
VPS28-204ENST00000526054 RAPH1Q70E73 1250 aa9.76□□□□□ -0.85
VPS28-204ENST00000526054 UBE2R2Q712K3 238 aaPredicted RBP9.76□□□□□ -0.85
VPS28-204ENST00000526054 ADGRF3Q8IZF5 1079 aa9.76□□□□□ -0.85
VPS28-204ENST00000526054 CNPY4Q8N129 248 aa9.76□□□□□ -0.85
VPS28-204ENST00000526054 D2HGDHQ8N465 521 aa9.76□□□□□ -0.85
VPS28-204ENST00000526054 OR2L8Q8NGY9 312 aa9.76□□□□□ -0.85
VPS28-204ENST00000526054 UHMK1Q8TAS1 419 aaKnown RBP9.76□□□□□ -0.85
VPS28-204ENST00000526054 MCOLN3Q8TDD5 553 aa9.76□□□□□ -0.85
VPS28-204ENST00000526054 SLC44A1Q8WWI5 657 aa9.76□□□□□ -0.85
VPS28-204ENST00000526054 THAP4Q8WY91 577 aa9.76□□□□□ -0.85
VPS28-204ENST00000526054 ANKRD7Q92527 254 aa9.76□□□□□ -0.85
VPS28-204ENST00000526054 MR1Q95460 341 aa9.76□□□□□ -0.85
VPS28-204ENST00000526054 SLC22A18Q96BI1 424 aa9.76□□□□□ -0.85
VPS28-204ENST00000526054 PDLIM5Q96HC4 596 aaKnown RBP9.76□□□□□ -0.85
VPS28-204ENST00000526054 HIST1H2AHQ96KK5 128 aa9.76□□□□□ -0.85
VPS28-204ENST00000526054 IL17FQ96PD4 163 aa9.76□□□□□ -0.85
VPS28-204ENST00000526054 PAFAH2Q99487 392 aa9.76□□□□□ -0.85
VPS28-204ENST00000526054 HIST1H2AJQ99878 128 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms