RNA–Protein interactions for RNA: ENST00000523824.5

NSMCE2-213, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

TSL 3

Gene NSMCE2, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-213ENST00000523824 STMN3Q9NZ72 180 aa7.56□□□□□ -1.2
NSMCE2-213ENST00000523824 STOX2Q9P2F5 926 aaPredicted RBP7.56□□□□□ -1.2
NSMCE2-213ENST00000523824 TRPC4Q9UBN4 977 aa7.56□□□□□ -1.2
NSMCE2-213ENST00000523824 TEKT2Q9UIF3 430 aa7.56□□□□□ -1.2
NSMCE2-213ENST00000523824 CDC14AQ9UNH5 594 aa7.56□□□□□ -1.2
NSMCE2-213ENST00000523824 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.56□□□□□ -1.2
NSMCE2-213ENST00000523824 NEU2Q9Y3R4 380 aa7.56□□□□□ -1.2
NSMCE2-213ENST00000523824 ALG6Q9Y672 507 aa7.56□□□□□ -1.2
NSMCE2-213ENST00000523824 MED13LQ71F56 2210 aa7.55□□□□□ -1.2
NSMCE2-213ENST00000523824 MACROD2A1Z1Q3 448 aa7.55□□□□□ -1.2
NSMCE2-213ENST00000523824 A8MUI8 341 aa7.55□□□□□ -1.2
NSMCE2-213ENST00000523824 RASGRF2O14827 1237 aa7.55□□□□□ -1.2
NSMCE2-213ENST00000523824 FANCGO15287 622 aa7.55□□□□□ -1.2
NSMCE2-213ENST00000523824 TTI1O43156 1089 aa7.55□□□□□ -1.2
NSMCE2-213ENST00000523824 PRPF4O43172 522 aaKnown RBP eCLIP7.55□□□□□ -1.2
NSMCE2-213ENST00000523824 CTSVO60911 334 aa7.55□□□□□ -1.2
NSMCE2-213ENST00000523824 WISP2O76076 250 aa7.55□□□□□ -1.2
NSMCE2-213ENST00000523824 FKBP9O95302 570 aa7.55□□□□□ -1.2
NSMCE2-213ENST00000523824 MED26O95402 600 aa7.55□□□□□ -1.2
NSMCE2-213ENST00000523824 NADKO95544 446 aaPredicted RBP7.55□□□□□ -1.2
NSMCE2-213ENST00000523824 CELA2AP08217 269 aa7.55□□□□□ -1.2
NSMCE2-213ENST00000523824 ITGAMP11215 1152 aa7.55□□□□□ -1.2
NSMCE2-213ENST00000523824 MSNP26038 577 aaKnown RBP7.55□□□□□ -1.2
NSMCE2-213ENST00000523824 EIF3EP60228 445 aaKnown RBP7.55□□□□□ -1.2
NSMCE2-213ENST00000523824 POU6F1Q14863 301 aa7.55□□□□□ -1.2
NSMCE2-213ENST00000523824 CDSNQ15517 529 aa7.55□□□□□ -1.2
NSMCE2-213ENST00000523824 KRTCAP3Q53RY4 240 aa7.55□□□□□ -1.2
NSMCE2-213ENST00000523824 FRMPD2BQ6IN97 320 aa7.55□□□□□ -1.2
NSMCE2-213ENST00000523824 PACS1Q6VY07 963 aa7.55□□□□□ -1.2
NSMCE2-213ENST00000523824 MEX3BQ6ZN04 569 aaKnown RBP7.55□□□□□ -1.2
NSMCE2-213ENST00000523824 BBS12Q6ZW61 710 aa7.55□□□□□ -1.2
NSMCE2-213ENST00000523824 NEK10Q6ZWH5 1172 aa7.55□□□□□ -1.2
NSMCE2-213ENST00000523824 SPPL2CQ8IUH8 684 aa7.55□□□□□ -1.2
NSMCE2-213ENST00000523824 CDKL3Q8IVW4 592 aaPredicted RBP7.55□□□□□ -1.2
NSMCE2-213ENST00000523824 DCUN1D3Q8IWE4 304 aa7.55□□□□□ -1.2
NSMCE2-213ENST00000523824 KATNAL2Q8IYT4 538 aa7.55□□□□□ -1.2
NSMCE2-213ENST00000523824 SLC22A15Q8IZD6 547 aa7.55□□□□□ -1.2
NSMCE2-213ENST00000523824 RAB42Q8N4Z0 105 aa7.55□□□□□ -1.2
NSMCE2-213ENST00000523824 ASZ1Q8WWH4 475 aa7.55□□□□□ -1.2
NSMCE2-213ENST00000523824 CABS1Q96KC9 395 aa7.55□□□□□ -1.2
NSMCE2-213ENST00000523824 SPATA13Q96N96 652 aa7.55□□□□□ -1.2
NSMCE2-213ENST00000523824 MIPEPQ99797 713 aa7.55□□□□□ -1.2
NSMCE2-213ENST00000523824 MENTQ9BUN1 341 aa7.55□□□□□ -1.2
NSMCE2-213ENST00000523824 TSSK1BQ9BXA7 367 aa7.55□□□□□ -1.2
NSMCE2-213ENST00000523824 ENAMQ9NRM1 1142 aa7.55□□□□□ -1.2
NSMCE2-213ENST00000523824 SPTLC3Q9NUV7 552 aa7.55□□□□□ -1.2
NSMCE2-213ENST00000523824 IFNKQ9P0W0 207 aa7.55□□□□□ -1.2
NSMCE2-213ENST00000523824 MEMO1Q9Y316 297 aa7.55□□□□□ -1.2
NSMCE2-213ENST00000523824 IGLV3-12A0A075B6K2 115 aa7.54□□□□□ -1.2
NSMCE2-213ENST00000523824 LOC105369274A0A096LPK9 316 aa7.54□□□□□ -1.2
NSMCE2-213ENST00000523824 LOC102723532A0A0G2JNH3 316 aa7.54□□□□□ -1.2
NSMCE2-213ENST00000523824 A0A1W2PQ72 361 aa7.54□□□□□ -1.2
NSMCE2-213ENST00000523824 CCDC162PA2VCL2 907 aa7.54□□□□□ -1.2
NSMCE2-213ENST00000523824 OR51F1A6NGY5 319 aa7.54□□□□□ -1.2
NSMCE2-213ENST00000523824 GOLGA6L19H0YKK7 550 aa7.54□□□□□ -1.2
NSMCE2-213ENST00000523824 FFAR3O14843 346 aa7.54□□□□□ -1.2
NSMCE2-213ENST00000523824 GPR42O15529 346 aa7.54□□□□□ -1.2
NSMCE2-213ENST00000523824 OR1I1O60431 355 aa7.54□□□□□ -1.2
NSMCE2-213ENST00000523824 ANXA5P08758 320 aa7.54□□□□□ -1.2
NSMCE2-213ENST00000523824 RBP3P10745 1247 aa7.54□□□□□ -1.2
NSMCE2-213ENST00000523824 CCR7P32248 378 aa7.54□□□□□ -1.2
NSMCE2-213ENST00000523824 CSNK1G2P78368 415 aa7.54□□□□□ -1.2
NSMCE2-213ENST00000523824 ALDH6A1Q02252 535 aaKnown RBP7.54□□□□□ -1.2
NSMCE2-213ENST00000523824 GRB7Q14451 532 aa7.54□□□□□ -1.2
NSMCE2-213ENST00000523824 TCEAL1Q15170 157 aa7.54□□□□□ -1.2
NSMCE2-213ENST00000523824 UNC5DQ6UXZ4 953 aa7.54□□□□□ -1.2
NSMCE2-213ENST00000523824 LUZP1Q86V48 1076 aa7.54□□□□□ -1.2
NSMCE2-213ENST00000523824 VRK3Q8IV63 474 aa7.54□□□□□ -1.2
NSMCE2-213ENST00000523824 OR4N4Q8N0Y3 316 aa7.54□□□□□ -1.2
NSMCE2-213ENST00000523824 GSDMBQ8TAX9 411 aa7.54□□□□□ -1.2
NSMCE2-213ENST00000523824 ACTL9Q8TC94 416 aa7.54□□□□□ -1.2
NSMCE2-213ENST00000523824 THAP3Q8WTV1 239 aaPredicted RBP7.54□□□□□ -1.2
NSMCE2-213ENST00000523824 CA5BP1Q8WTZ4 195 aa7.54□□□□□ -1.2
NSMCE2-213ENST00000523824 ZNF354BQ96LW1 612 aa7.54□□□□□ -1.2
NSMCE2-213ENST00000523824 GPR137Q96N19 417 aa7.54□□□□□ -1.2
NSMCE2-213ENST00000523824 CHP1Q99653 195 aa7.54□□□□□ -1.2
NSMCE2-213ENST00000523824 TUBB6Q9BUF5 446 aa7.54□□□□□ -1.2
NSMCE2-213ENST00000523824 RAB11FIP5Q9BXF6 653 aa7.54□□□□□ -1.2
NSMCE2-213ENST00000523824 ENKD1Q9H0I2 346 aa7.54□□□□□ -1.2
NSMCE2-213ENST00000523824 ZNF700Q9H0M5 742 aa7.54□□□□□ -1.2
NSMCE2-213ENST00000523824 TSPAN10Q9H1Z9 355 aaPredicted RBP7.54□□□□□ -1.2
NSMCE2-213ENST00000523824 GOLPH3Q9H4A6 298 aa7.54□□□□□ -1.2
NSMCE2-213ENST00000523824 LRRC40Q9H9A6 602 aa7.54□□□□□ -1.2
NSMCE2-213ENST00000523824 NHEJ1Q9H9Q4 299 aaPredicted RBP7.54□□□□□ -1.2
NSMCE2-213ENST00000523824 C14orf105Q9NVL8 296 aa7.54□□□□□ -1.2
NSMCE2-213ENST00000523824 ZNF835Q9Y2P0 537 aa7.54□□□□□ -1.2
NSMCE2-213ENST00000523824 GTF3C3Q9Y5Q9 886 aa7.54□□□□□ -1.2
NSMCE2-213ENST00000523824 MAP1AP78559 2803 aaPredicted RBP7.53□□□□□ -1.2
NSMCE2-213ENST00000523824 RCCD1A6NED2 376 aa7.53□□□□□ -1.2
NSMCE2-213ENST00000523824 NPIPA5E9PKD4 350 aa7.53□□□□□ -1.2
NSMCE2-213ENST00000523824 H0YGG7 62 aa7.53□□□□□ -1.2
NSMCE2-213ENST00000523824 VPS26AO75436 327 aa7.53□□□□□ -1.2
NSMCE2-213ENST00000523824 GPC4O75487 556 aa7.53□□□□□ -1.2
NSMCE2-213ENST00000523824 APOA4P06727 396 aa7.53□□□□□ -1.2
NSMCE2-213ENST00000523824 TPM3P06753 285 aa7.53□□□□□ -1.2
NSMCE2-213ENST00000523824 ABOP16442 354 aa7.53□□□□□ -1.2
NSMCE2-213ENST00000523824 PSMB5P28074 263 aa7.53□□□□□ -1.2
NSMCE2-213ENST00000523824 FOXN2P32314 431 aa7.53□□□□□ -1.2
NSMCE2-213ENST00000523824 PPARGP37231 505 aaPredicted RBP7.53□□□□□ -1.2
NSMCE2-213ENST00000523824 MARCKSL1P49006 195 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms