RNA–Protein interactions for RNA: ENST00000522796.1

HMGB4-204, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGB4, Length 2,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-204ENST00000522796 LIPHQ8WWY8 451 aa8.09□□□□□ -1.11
HMGB4-204ENST00000522796 C14orf144Q96I85 54 aa8.09□□□□□ -1.11
HMGB4-204ENST00000522796 SORCS2Q96PQ0 1159 aa8.09□□□□□ -1.11
HMGB4-204ENST00000522796 GAD1Q99259 594 aa8.09□□□□□ -1.11
HMGB4-204ENST00000522796 TREX2Q9BQ50 279 aaPredicted RBP8.09□□□□□ -1.11
HMGB4-204ENST00000522796 C2orf88Q9BSF0 95 aa8.09□□□□□ -1.11
HMGB4-204ENST00000522796 ADAM33Q9BZ11 813 aa8.09□□□□□ -1.11
HMGB4-204ENST00000522796 GSX2Q9BZM3 304 aa8.09□□□□□ -1.11
HMGB4-204ENST00000522796 TRIM9Q9C026 710 aa8.09□□□□□ -1.11
HMGB4-204ENST00000522796 OPA3Q9H6K4 179 aa8.09□□□□□ -1.11
HMGB4-204ENST00000522796 ACSS3Q9H6R3 686 aa8.09□□□□□ -1.11
HMGB4-204ENST00000522796 WDR41Q9HAD4 459 aa8.09□□□□□ -1.11
HMGB4-204ENST00000522796 FAM212BQ9NTI7 297 aaPredicted RBP8.09□□□□□ -1.11
HMGB4-204ENST00000522796 TRMT13Q9NUP7 481 aaKnown RBP8.09□□□□□ -1.11
HMGB4-204ENST00000522796 USP21Q9UK80 565 aa8.09□□□□□ -1.11
HMGB4-204ENST00000522796 CA14Q9ULX7 337 aa8.09□□□□□ -1.11
HMGB4-204ENST00000522796 RPH3ALQ9UNE2 315 aa8.09□□□□□ -1.11
HMGB4-204ENST00000522796 TP53BP1Q12888 1972 aaPredicted RBP8.09□□□□□ -1.11
HMGB4-204ENST00000522796 FRMPD2Q68DX3 1309 aaPredicted RBP8.09□□□□□ -1.11
HMGB4-204ENST00000522796 A0A1W2PPL8 197 aa8.09□□□□□ -1.11
HMGB4-204ENST00000522796 FAM234BA2RU67 622 aa8.09□□□□□ -1.11
HMGB4-204ENST00000522796 IQCF5A8MTL0 148 aa8.09□□□□□ -1.11
HMGB4-204ENST00000522796 COPEO14579 308 aa8.09□□□□□ -1.11
HMGB4-204ENST00000522796 PHYHO14832 338 aa8.09□□□□□ -1.11
HMGB4-204ENST00000522796 SCAMP2O15127 329 aaKnown RBP8.09□□□□□ -1.11
HMGB4-204ENST00000522796 OGTO15294 1046 aa8.09□□□□□ -1.11
HMGB4-204ENST00000522796 CBX7O95931 251 aa8.09□□□□□ -1.11
HMGB4-204ENST00000522796 PRR35P0CG20 571 aa8.09□□□□□ -1.11
HMGB4-204ENST00000522796 NR2F1P10589 423 aa8.09□□□□□ -1.11
HMGB4-204ENST00000522796 CYP19A1P11511 503 aaPredicted RBP8.09□□□□□ -1.11
HMGB4-204ENST00000522796 MUC1P15941 1255 aaPredicted RBP8.09□□□□□ -1.11
HMGB4-204ENST00000522796 PCMT1P22061 227 aa8.09□□□□□ -1.11
HMGB4-204ENST00000522796 ATP5A1P25705 553 aaKnown RBP8.09□□□□□ -1.11
HMGB4-204ENST00000522796 ELK4P28324 431 aa8.09□□□□□ -1.11
HMGB4-204ENST00000522796 TACR3P29371 465 aa8.09□□□□□ -1.11
HMGB4-204ENST00000522796 DSG3P32926 999 aa8.09□□□□□ -1.11
HMGB4-204ENST00000522796 RFC3P40938 356 aa8.09□□□□□ -1.11
HMGB4-204ENST00000522796 RARRES1P49788 294 aa8.09□□□□□ -1.11
HMGB4-204ENST00000522796 ATXN3P54252 364 aaPredicted RBP8.09□□□□□ -1.11
HMGB4-204ENST00000522796 RAC3P60763 192 aa8.09□□□□□ -1.11
HMGB4-204ENST00000522796 GPR17Q13304 367 aa8.09□□□□□ -1.11
HMGB4-204ENST00000522796 ORC2Q13416 577 aaPredicted RBP8.09□□□□□ -1.11
HMGB4-204ENST00000522796 SNTB1Q13884 538 aaKnown RBP8.09□□□□□ -1.11
HMGB4-204ENST00000522796 ECM1Q16610 540 aa8.09□□□□□ -1.11
HMGB4-204ENST00000522796 SEL1L3Q68CR1 1132 aa8.09□□□□□ -1.11
HMGB4-204ENST00000522796 CIAPIN1Q6FI81 312 aa8.09□□□□□ -1.11
HMGB4-204ENST00000522796 NUDT13Q86X67 352 aa8.09□□□□□ -1.11
HMGB4-204ENST00000522796 SLC41A1Q8IVJ1 513 aa8.09□□□□□ -1.11
HMGB4-204ENST00000522796 LRRC17Q8N6Y2 441 aa8.09□□□□□ -1.11
HMGB4-204ENST00000522796 ZNF454Q8N9F8 522 aa8.09□□□□□ -1.11
HMGB4-204ENST00000522796 ETNPPLQ8TBG4 499 aa8.09□□□□□ -1.11
HMGB4-204ENST00000522796 ST7LQ8TDW4 575 aa8.09□□□□□ -1.11
HMGB4-204ENST00000522796 WFIKKN2Q8TEU8 576 aa8.09□□□□□ -1.11
HMGB4-204ENST00000522796 CPA5Q8WXQ8 436 aa8.09□□□□□ -1.11
HMGB4-204ENST00000522796 RSC1A1Q92681 617 aa8.09□□□□□ -1.11
HMGB4-204ENST00000522796 KHSRPQ92945 711 aaKnown RBP eCLIP8.09□□□□□ -1.11
HMGB4-204ENST00000522796 WNT8BQ93098 351 aa8.09□□□□□ -1.11
HMGB4-204ENST00000522796 MTERF3Q96E29 417 aa8.09□□□□□ -1.11
HMGB4-204ENST00000522796 MYO19Q96H55 970 aa8.09□□□□□ -1.11
HMGB4-204ENST00000522796 NARS2Q96I59 477 aaKnown RBP8.09□□□□□ -1.11
HMGB4-204ENST00000522796 LRIG1Q96JA1 1093 aa8.09□□□□□ -1.11
HMGB4-204ENST00000522796 NT5C1BQ96P26 610 aa8.09□□□□□ -1.11
HMGB4-204ENST00000522796 CASD1Q96PB1 797 aa8.09□□□□□ -1.11
HMGB4-204ENST00000522796 CPXM1Q96SM3 734 aa8.09□□□□□ -1.11
HMGB4-204ENST00000522796 SORBS1Q9BX66 1292 aaKnown RBP8.09□□□□□ -1.11
HMGB4-204ENST00000522796 POTEKPQ9BYX7 375 aa8.09□□□□□ -1.11
HMGB4-204ENST00000522796 C20orf27Q9GZN8 174 aa8.09□□□□□ -1.11
HMGB4-204ENST00000522796 CLEC4MQ9H2X3 399 aaPredicted RBP8.09□□□□□ -1.11
HMGB4-204ENST00000522796 KAT8Q9H7Z6 458 aaKnown RBP8.09□□□□□ -1.11
HMGB4-204ENST00000522796 ZNF395Q9H8N7 513 aaPredicted RBP8.09□□□□□ -1.11
HMGB4-204ENST00000522796 ZNF334Q9HCZ1 680 aaPredicted RBP8.09□□□□□ -1.11
HMGB4-204ENST00000522796 GPRC5CQ9NQ84 441 aa8.09□□□□□ -1.11
HMGB4-204ENST00000522796 SLC22A11Q9NSA0 550 aa8.09□□□□□ -1.11
HMGB4-204ENST00000522796 DLGAP4Q9Y2H0 992 aa8.09□□□□□ -1.11
HMGB4-204ENST00000522796 ALKQ9UM73 1620 aa8.09□□□□□ -1.11
HMGB4-204ENST00000522796 A0A1W2PN81 502 aa8.08□□□□□ -1.12
HMGB4-204ENST00000522796 XKRY2A2RUG3 117 aa8.08□□□□□ -1.12
HMGB4-204ENST00000522796 TISP43B9A030 160 aa8.08□□□□□ -1.12
HMGB4-204ENST00000522796 B9A039 149 aa8.08□□□□□ -1.12
HMGB4-204ENST00000522796 E9PAM4 449 aa8.08□□□□□ -1.12
HMGB4-204ENST00000522796 SLC28A1O00337 649 aa8.08□□□□□ -1.12
HMGB4-204ENST00000522796 PROM1O43490 865 aa8.08□□□□□ -1.12
HMGB4-204ENST00000522796 NRP2O60462 931 aa8.08□□□□□ -1.12
HMGB4-204ENST00000522796 MITFO75030 526 aaPredicted RBP8.08□□□□□ -1.12
HMGB4-204ENST00000522796 LRG1P02750 347 aa8.08□□□□□ -1.12
HMGB4-204ENST00000522796 STAG3L3P0CL85 134 aa8.08□□□□□ -1.12
HMGB4-204ENST00000522796 HLA-EP13747 358 aa8.08□□□□□ -1.12
HMGB4-204ENST00000522796 UCHL3P15374 230 aa8.08□□□□□ -1.12
HMGB4-204ENST00000522796 CD6P30203 668 aa8.08□□□□□ -1.12
HMGB4-204ENST00000522796 MPIP34949 423 aa8.08□□□□□ -1.12
HMGB4-204ENST00000522796 SPRP35270 261 aaPredicted RBP8.08□□□□□ -1.12
HMGB4-204ENST00000522796 CHRNA7P36544 502 aa8.08□□□□□ -1.12
HMGB4-204ENST00000522796 CRATP43155 626 aa8.08□□□□□ -1.12
HMGB4-204ENST00000522796 CSNK1DP48730 415 aa8.08□□□□□ -1.12
HMGB4-204ENST00000522796 TAS2R40P59535 323 aa8.08□□□□□ -1.12
HMGB4-204ENST00000522796 NCS1P62166 190 aa8.08□□□□□ -1.12
HMGB4-204ENST00000522796 GTF2BQ00403 316 aa8.08□□□□□ -1.12
HMGB4-204ENST00000522796 FPGSQ05932 587 aa8.08□□□□□ -1.12
HMGB4-204ENST00000522796 PRKAA1Q13131 559 aa8.08□□□□□ -1.12
HMGB4-204ENST00000522796 ILKQ13418 452 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms