RNA–Protein interactions for RNA: ENST00000522792.1

CTNNA1-236, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 2,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-236ENST00000522792 PCNAP12004 261 aa14.92□□□□□ -0.02
CTNNA1-236ENST00000522792 IDO1P14902 403 aa14.92□□□□□ -0.02
CTNNA1-236ENST00000522792 EZRP15311 586 aaKnown RBP14.92□□□□□ -0.02
CTNNA1-236ENST00000522792 CCND1P24385 295 aa14.92□□□□□ -0.02
CTNNA1-236ENST00000522792 HNF4AP41235 474 aa14.92□□□□□ -0.02
CTNNA1-236ENST00000522792 ILF3Q12906 894 aaKnown RBP eCLIP14.92□□□□□ -0.02
CTNNA1-236ENST00000522792 SLBPQ14493 270 aaKnown RBP eCLIP14.92□□□□□ -0.02
CTNNA1-236ENST00000522792 ARHGAP19Q14CB8 494 aa14.92□□□□□ -0.02
CTNNA1-236ENST00000522792 HERC3Q15034 1050 aa14.92□□□□□ -0.02
CTNNA1-236ENST00000522792 GSTA3Q16772 222 aa14.92□□□□□ -0.02
CTNNA1-236ENST00000522792 ABRAXAS1Q6UWZ7 409 aa14.92□□□□□ -0.02
CTNNA1-236ENST00000522792 RNF165Q6ZSG1 346 aa14.92□□□□□ -0.02
CTNNA1-236ENST00000522792 TMEFF1Q8IYR6 380 aa14.92□□□□□ -0.02
CTNNA1-236ENST00000522792 RAB42Q8N4Z0 105 aa14.92□□□□□ -0.02
CTNNA1-236ENST00000522792 CADM4Q8NFZ8 388 aa14.92□□□□□ -0.02
CTNNA1-236ENST00000522792 RCN3Q96D15 328 aa14.92□□□□□ -0.02
CTNNA1-236ENST00000522792 MVB12BQ9H7P6 319 aa14.92□□□□□ -0.02
CTNNA1-236ENST00000522792 LRTM1Q9HBL6 345 aa14.92□□□□□ -0.02
CTNNA1-236ENST00000522792 GSC2O15499 205 aa14.92□□□□□ -0.02
CTNNA1-236ENST00000522792 SEC22BO75396 215 aa14.92□□□□□ -0.02
CTNNA1-236ENST00000522792 C1GALT1C1LP0DN25 315 aa14.92□□□□□ -0.02
CTNNA1-236ENST00000522792 CDH1P12830 882 aa14.92□□□□□ -0.02
CTNNA1-236ENST00000522792 HSD17B2P37059 387 aa14.92□□□□□ -0.02
CTNNA1-236ENST00000522792 MNAT1P51948 309 aa14.92□□□□□ -0.02
CTNNA1-236ENST00000522792 USP39Q53GS9 565 aaKnown RBP14.92□□□□□ -0.02
CTNNA1-236ENST00000522792 IL23RQ5VWK5 629 aa14.92□□□□□ -0.02
CTNNA1-236ENST00000522792 LCTLQ6UWM7 567 aa14.92□□□□□ -0.02
CTNNA1-236ENST00000522792 ARMCX6Q7L4S7 300 aa14.92□□□□□ -0.02
CTNNA1-236ENST00000522792 WDR20Q8TBZ3 569 aa14.92□□□□□ -0.02
CTNNA1-236ENST00000522792 SETD7Q8WTS6 366 aaKnown RBP14.92□□□□□ -0.02
CTNNA1-236ENST00000522792 MTERF1Q99551 399 aaKnown RBP14.92□□□□□ -0.02
CTNNA1-236ENST00000522792 NPAS2Q99743 824 aa14.92□□□□□ -0.02
CTNNA1-236ENST00000522792 SPNS1Q9H2V7 528 aa14.92□□□□□ -0.02
CTNNA1-236ENST00000522792 SDR39U1Q9NRG7 319 aaPredicted RBP14.92□□□□□ -0.02
CTNNA1-236ENST00000522792 MRGBPQ9NV56 204 aa14.92□□□□□ -0.02
CTNNA1-236ENST00000522792 SPATA6Q9NWH7 488 aaPredicted RBP14.92□□□□□ -0.02
CTNNA1-236ENST00000522792 DLGAP2Q9P1A6 1054 aa14.92□□□□□ -0.02
CTNNA1-236ENST00000522792 ZNF624Q9P2J8 865 aaPredicted RBP14.92□□□□□ -0.02
CTNNA1-236ENST00000522792 ICKQ9UPZ9 632 aa14.92□□□□□ -0.02
CTNNA1-236ENST00000522792 A0A1W2PPV9 198 aa14.91□□□□□ -0.02
CTNNA1-236ENST00000522792 ZNF839A8K0R7 811 aa14.91□□□□□ -0.02
CTNNA1-236ENST00000522792 PKLRP30613 574 aa14.91□□□□□ -0.02
CTNNA1-236ENST00000522792 CPOXP36551 454 aa14.91□□□□□ -0.02
CTNNA1-236ENST00000522792 NUDT2P50583 147 aa14.91□□□□□ -0.02
CTNNA1-236ENST00000522792 RAB28P51157 221 aa14.91□□□□□ -0.02
CTNNA1-236ENST00000522792 EMX2Q04743 252 aa14.91□□□□□ -0.02
CTNNA1-236ENST00000522792 PCDH1Q08174 1060 aa14.91□□□□□ -0.02
CTNNA1-236ENST00000522792 C1orf61Q13536 156 aa14.91□□□□□ -0.02
CTNNA1-236ENST00000522792 ATG9BQ674R7 924 aa14.91□□□□□ -0.02
CTNNA1-236ENST00000522792 NXPE4Q6UWF7 544 aa14.91□□□□□ -0.02
CTNNA1-236ENST00000522792 PARGQ86W56 976 aa14.91□□□□□ -0.02
CTNNA1-236ENST00000522792 FUNDC1Q8IVP5 155 aa14.91□□□□□ -0.02
CTNNA1-236ENST00000522792 SMPDL3AQ92484 453 aa14.91□□□□□ -0.02
CTNNA1-236ENST00000522792 RAB3IPQ96QF0 476 aaPredicted RBP14.91□□□□□ -0.02
CTNNA1-236ENST00000522792 RTKNQ9BST9 563 aa14.91□□□□□ -0.02
CTNNA1-236ENST00000522792 HAUS8Q9BT25 410 aa14.91□□□□□ -0.02
CTNNA1-236ENST00000522792 SLC40A1Q9NP59 571 aa14.91□□□□□ -0.02
CTNNA1-236ENST00000522792 GEMIN8Q9NWZ8 242 aaKnown RBP14.91□□□□□ -0.02
CTNNA1-236ENST00000522792 HEBP2Q9Y5Z4 205 aa14.91□□□□□ -0.02
CTNNA1-236ENST00000522792 VCANP13611 3396 aa14.91□□□□□ -0.02
CTNNA1-236ENST00000522792 A6NCN8 305 aa14.9□□□□□ -0.02
CTNNA1-236ENST00000522792 H0YIV9 168 aa14.9□□□□□ -0.02
CTNNA1-236ENST00000522792 NR5A2O00482 541 aa14.9□□□□□ -0.02
CTNNA1-236ENST00000522792 SH3BGRLO75368 114 aa14.9□□□□□ -0.02
CTNNA1-236ENST00000522792 G6PDP11413 515 aa14.9□□□□□ -0.02
CTNNA1-236ENST00000522792 F3P13726 295 aa14.9□□□□□ -0.02
CTNNA1-236ENST00000522792 ITGAXP20702 1163 aa14.9□□□□□ -0.02
CTNNA1-236ENST00000522792 CD38P28907 300 aa14.9□□□□□ -0.02
CTNNA1-236ENST00000522792 CASP2P42575 452 aa14.9□□□□□ -0.02
CTNNA1-236ENST00000522792 UFM1P61960 85 aa14.9□□□□□ -0.02
CTNNA1-236ENST00000522792 MAPRE2Q15555 327 aa14.9□□□□□ -0.02
CTNNA1-236ENST00000522792 MED27Q6P2C8 311 aa14.9□□□□□ -0.02
CTNNA1-236ENST00000522792 WASH2PQ6VEQ5 465 aa14.9□□□□□ -0.02
CTNNA1-236ENST00000522792 OR7G3Q8NG95 312 aa14.9□□□□□ -0.02
CTNNA1-236ENST00000522792 PATE1Q8WXA2 126 aa14.9□□□□□ -0.02
CTNNA1-236ENST00000522792 MCUR1Q96AQ8 359 aa14.9□□□□□ -0.02
CTNNA1-236ENST00000522792 CXorf40BQ96DE9 158 aa14.9□□□□□ -0.02
CTNNA1-236ENST00000522792 TEX37Q96LM6 180 aa14.9□□□□□ -0.02
CTNNA1-236ENST00000522792 PCED1AQ9H1Q7 454 aa14.9□□□□□ -0.02
CTNNA1-236ENST00000522792 WASH6PQ9NQA3 447 aa14.9□□□□□ -0.02
CTNNA1-236ENST00000522792 CUEDC1Q9NWM3 386 aaPredicted RBP14.9□□□□□ -0.02
CTNNA1-236ENST00000522792 C1orf109Q9NX04 203 aa14.9□□□□□ -0.02
CTNNA1-236ENST00000522792 NOP53Q9NZM5 478 aaKnown RBP14.9□□□□□ -0.02
CTNNA1-236ENST00000522792 PCOLCE2Q9UKZ9 415 aa14.9□□□□□ -0.02
CTNNA1-236ENST00000522792 COLEC10Q9Y6Z7 277 aa14.9□□□□□ -0.02
CTNNA1-236ENST00000522792 A0A1W2PR77 199 aa14.9□□□□□ -0.02
CTNNA1-236ENST00000522792 PIPSLA2A3N6 862 aa14.9□□□□□ -0.02
CTNNA1-236ENST00000522792 SNRPB2P08579 225 aaKnown RBP14.9□□□□□ -0.02
CTNNA1-236ENST00000522792 CTSEP14091 401 aa14.9□□□□□ -0.02
CTNNA1-236ENST00000522792 SLC36A4Q6YBV0 504 aa14.9□□□□□ -0.02
CTNNA1-236ENST00000522792 TAF8Q7Z7C8 310 aa14.9□□□□□ -0.02
CTNNA1-236ENST00000522792 C17orf64Q86WR6 236 aa14.9□□□□□ -0.02
CTNNA1-236ENST00000522792 SFTPA2Q8IWL1 248 aa14.9□□□□□ -0.02
CTNNA1-236ENST00000522792 C10orf67Q8IYJ2 551 aa14.9□□□□□ -0.02
CTNNA1-236ENST00000522792 MFSD2AQ8NA29 543 aa14.9□□□□□ -0.02
CTNNA1-236ENST00000522792 ZNF740Q8NDX6 193 aa14.9□□□□□ -0.02
CTNNA1-236ENST00000522792 GPBAR1Q8TDU6 330 aa14.9□□□□□ -0.02
CTNNA1-236ENST00000522792 WDR34Q96EX3 536 aa14.9□□□□□ -0.02
CTNNA1-236ENST00000522792 EFCAB11Q9BUY7 163 aa14.9□□□□□ -0.02
CTNNA1-236ENST00000522792 GSDMCQ9BYG8 508 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms