RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 ARMC1Q9NVT9 282 aa13.48□□□□□ -0.25
SYNPO-205ENST00000522122 TMEM248Q9NWD8 314 aa13.48□□□□□ -0.25
SYNPO-205ENST00000522122 SH3PXD2BA1X283 911 aa13.48□□□□□ -0.25
SYNPO-205ENST00000522122 ABCB7O75027 752 aa13.48□□□□□ -0.25
SYNPO-205ENST00000522122 ECDO95905 644 aaPredicted RBP13.48□□□□□ -0.25
SYNPO-205ENST00000522122 CD68P34810 354 aaPredicted RBP13.48□□□□□ -0.25
SYNPO-205ENST00000522122 GDF5P43026 501 aa13.48□□□□□ -0.25
SYNPO-205ENST00000522122 GALNT1Q10472 559 aaPredicted RBP13.48□□□□□ -0.25
SYNPO-205ENST00000522122 MADCAM1Q13477 382 aa13.48□□□□□ -0.25
SYNPO-205ENST00000522122 TGFBIQ15582 683 aa13.48□□□□□ -0.25
SYNPO-205ENST00000522122 SPANXN4Q5MJ08 99 aa13.48□□□□□ -0.25
SYNPO-205ENST00000522122 LRRC70Q7Z2Q7 622 aa13.48□□□□□ -0.25
SYNPO-205ENST00000522122 GOLGA7Q7Z5G4 137 aa13.48□□□□□ -0.25
SYNPO-205ENST00000522122 KDM1BQ8NB78 822 aa13.48□□□□□ -0.25
SYNPO-205ENST00000522122 KAT2AQ92830 837 aa13.48□□□□□ -0.25
SYNPO-205ENST00000522122 ZNF597Q96LX8 424 aa13.48□□□□□ -0.25
SYNPO-205ENST00000522122 IGSF5Q9NSI5 407 aa13.48□□□□□ -0.25
SYNPO-205ENST00000522122 FZD4Q9ULV1 537 aa13.48□□□□□ -0.25
SYNPO-205ENST00000522122 SLC22A14Q9Y267 594 aa13.48□□□□□ -0.25
SYNPO-205ENST00000522122 WDR37Q9Y2I8 494 aa13.48□□□□□ -0.25
SYNPO-205ENST00000522122 LOC100130705A0A1B0GUX0 176 aa13.48□□□□□ -0.25
SYNPO-205ENST00000522122 FAM92AA1XBS5 289 aa13.48□□□□□ -0.25
SYNPO-205ENST00000522122 CLCN4P51793 760 aa13.48□□□□□ -0.25
SYNPO-205ENST00000522122 CAP1Q01518 475 aa13.48□□□□□ -0.25
SYNPO-205ENST00000522122 UBXN11Q5T124 520 aa13.48□□□□□ -0.25
SYNPO-205ENST00000522122 TPGS2Q68CL5 300 aa13.48□□□□□ -0.25
SYNPO-205ENST00000522122 SH2D5Q6ZV89 423 aa13.48□□□□□ -0.25
SYNPO-205ENST00000522122 LGI4Q8N135 537 aa13.48□□□□□ -0.25
SYNPO-205ENST00000522122 C9orf43Q8TAL5 461 aaPredicted RBP13.48□□□□□ -0.25
SYNPO-205ENST00000522122 DNASE1L2Q92874 299 aa13.48□□□□□ -0.25
SYNPO-205ENST00000522122 AURKBQ96GD4 344 aaPredicted RBP13.48□□□□□ -0.25
SYNPO-205ENST00000522122 NSUN3Q9H649 340 aaKnown RBP13.48□□□□□ -0.25
SYNPO-205ENST00000522122 CREG1O75629 220 aa13.47□□□□□ -0.25
SYNPO-205ENST00000522122 CLPXO76031 633 aa13.47□□□□□ -0.25
SYNPO-205ENST00000522122 GNRH1P01148 92 aa13.47□□□□□ -0.25
SYNPO-205ENST00000522122 PSMD8P48556 350 aa13.47□□□□□ -0.25
SYNPO-205ENST00000522122 DIO3P55073 304 aa13.47□□□□□ -0.25
SYNPO-205ENST00000522122 PCDH1Q08174 1060 aa13.47□□□□□ -0.25
SYNPO-205ENST00000522122 TARDBPQ13148 414 aaKnown RBP eCLIP13.47□□□□□ -0.25
SYNPO-205ENST00000522122 CARD16Q5EG05 197 aa13.47□□□□□ -0.25
SYNPO-205ENST00000522122 LCN1P1Q5VSP4 162 aa13.47□□□□□ -0.25
SYNPO-205ENST00000522122 PCBD2Q9H0N5 130 aa13.47□□□□□ -0.25
SYNPO-205ENST00000522122 RPF2Q9H7B2 306 aaKnown RBP13.47□□□□□ -0.25
SYNPO-205ENST00000522122 SP140LQ9H930 580 aa13.47□□□□□ -0.25
SYNPO-205ENST00000522122 MAP10Q9P2G4 905 aa13.47□□□□□ -0.25
SYNPO-205ENST00000522122 SNX7Q9UNH6 387 aa13.47□□□□□ -0.25
SYNPO-205ENST00000522122 RPL36Q9Y3U8 105 aaKnown RBP13.47□□□□□ -0.25
SYNPO-205ENST00000522122 PDPK1O15530 556 aa13.47□□□□□ -0.25
SYNPO-205ENST00000522122 PRAMEF11O60813 436 aa13.47□□□□□ -0.25
SYNPO-205ENST00000522122 CHRM5P08912 532 aaPredicted RBP13.47□□□□□ -0.25
SYNPO-205ENST00000522122 PLA2G16P53816 162 aa13.47□□□□□ -0.25
SYNPO-205ENST00000522122 SCARB2Q14108 478 aa13.47□□□□□ -0.25
SYNPO-205ENST00000522122 PTPRCAPQ14761 206 aa13.47□□□□□ -0.25
SYNPO-205ENST00000522122 CRTC2Q53ET0 693 aaPredicted RBP13.47□□□□□ -0.25
SYNPO-205ENST00000522122 COQ5Q5HYK3 327 aa13.47□□□□□ -0.25
SYNPO-205ENST00000522122 LCN8Q6JVE9 175 aa13.47□□□□□ -0.25
SYNPO-205ENST00000522122 GDF6Q6KF10 455 aaPredicted RBP13.47□□□□□ -0.25
SYNPO-205ENST00000522122 MEIOBQ8N635 442 aa13.47□□□□□ -0.25
SYNPO-205ENST00000522122 SMG7Q92540 1137 aaKnown RBP13.47□□□□□ -0.25
SYNPO-205ENST00000522122 ZNF514Q96K75 400 aaPredicted RBP13.47□□□□□ -0.25
SYNPO-205ENST00000522122 PTPN18Q99952 460 aa13.47□□□□□ -0.25
SYNPO-205ENST00000522122 KCNS3Q9BQ31 491 aa13.47□□□□□ -0.25
SYNPO-205ENST00000522122 TRPV5Q9NQA5 729 aa13.47□□□□□ -0.25
SYNPO-205ENST00000522122 EBF1Q9UH73 591 aa13.47□□□□□ -0.25
SYNPO-205ENST00000522122 CLEC4AQ9UMR7 237 aa13.47□□□□□ -0.25
SYNPO-205ENST00000522122 CFL2Q9Y281 166 aa13.47□□□□□ -0.25
SYNPO-205ENST00000522122 A0A1W2PPW3 197 aa13.47□□□□□ -0.25
SYNPO-205ENST00000522122 ZNF701M0R085 212 aaPredicted RBP13.47□□□□□ -0.25
SYNPO-205ENST00000522122 C8AP07357 584 aa13.47□□□□□ -0.25
SYNPO-205ENST00000522122 CASP9P55211 416 aa13.47□□□□□ -0.25
SYNPO-205ENST00000522122 ZNF792Q3KQV3 632 aa13.47□□□□□ -0.25
SYNPO-205ENST00000522122 PKDCCQ504Y2 493 aa13.47□□□□□ -0.25
SYNPO-205ENST00000522122 CCDC157Q569K6 752 aa13.47□□□□□ -0.25
SYNPO-205ENST00000522122 PEG10Q86TG7 708 aaKnown RBP13.47□□□□□ -0.25
SYNPO-205ENST00000522122 KCNJ9Q92806 393 aa13.47□□□□□ -0.25
SYNPO-205ENST00000522122 L3HYPDHQ96EM0 354 aa13.47□□□□□ -0.25
SYNPO-205ENST00000522122 SLC35G5Q96KT7 338 aa13.47□□□□□ -0.25
SYNPO-205ENST00000522122 MRGPRX2Q96LB1 330 aa13.47□□□□□ -0.25
SYNPO-205ENST00000522122 SMOXQ9NWM0 555 aa13.47□□□□□ -0.25
SYNPO-205ENST00000522122 FBXW2Q9UKT8 454 aa13.47□□□□□ -0.25
SYNPO-205ENST00000522122 ATAD5Q96QE3 1844 aa13.47□□□□□ -0.25
SYNPO-205ENST00000522122 PITPNM1O00562 1244 aa13.47□□□□□ -0.25
SYNPO-205ENST00000522122 TPST2O60704 377 aa13.47□□□□□ -0.25
SYNPO-205ENST00000522122 SCN2BO60939 215 aa13.47□□□□□ -0.25
SYNPO-205ENST00000522122 CD1DP15813 335 aa13.47□□□□□ -0.25
SYNPO-205ENST00000522122 MCCD1P59942 119 aaPredicted RBP13.47□□□□□ -0.25
SYNPO-205ENST00000522122 FOXB2Q5VYV0 432 aa13.47□□□□□ -0.25
SYNPO-205ENST00000522122 CLEC14AQ86T13 490 aa13.47□□□□□ -0.25
SYNPO-205ENST00000522122 CENPSQ8N2Z9 138 aa13.47□□□□□ -0.25
SYNPO-205ENST00000522122 NPWQ8N729 165 aa13.47□□□□□ -0.25
SYNPO-205ENST00000522122 OR2AP1Q8NGE2 309 aa13.47□□□□□ -0.25
SYNPO-205ENST00000522122 NPLOC4Q8TAT6 608 aa13.47□□□□□ -0.25
SYNPO-205ENST00000522122 IL1RAPQ9NPH3 570 aa13.47□□□□□ -0.25
SYNPO-205ENST00000522122 ITM2CQ9NQX7 267 aa13.47□□□□□ -0.25
SYNPO-205ENST00000522122 SNTG1Q9NSN8 517 aa13.47□□□□□ -0.25
SYNPO-205ENST00000522122 OSER1Q9NX31 292 aa13.47□□□□□ -0.25
SYNPO-205ENST00000522122 GPC6Q9Y625 555 aaPredicted RBP13.47□□□□□ -0.25
SYNPO-205ENST00000522122 BEST1O76090 585 aa13.46□□□□□ -0.25
SYNPO-205ENST00000522122 HPRP00739 348 aa13.46□□□□□ -0.25
SYNPO-205ENST00000522122 HSD17B1P14061 328 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms