RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 SMG7Q92540 1137 aaKnown RBP3.17□□□□□ -1.9
HMGN1P28-201ENST00000521340 NEUROG1Q92886 237 aa3.17□□□□□ -1.9
HMGN1P28-201ENST00000521340 ADGRG7Q96K78 797 aa3.17□□□□□ -1.9
HMGN1P28-201ENST00000521340 KLHL5Q96PQ7 755 aa3.17□□□□□ -1.9
HMGN1P28-201ENST00000521340 TMEM237Q96Q45 408 aa3.17□□□□□ -1.9
HMGN1P28-201ENST00000521340 MAP3K3Q99759 626 aa3.17□□□□□ -1.9
HMGN1P28-201ENST00000521340 RTP3Q9BQQ7 232 aa3.17□□□□□ -1.9
HMGN1P28-201ENST00000521340 ATG101Q9BSB4 218 aa3.17□□□□□ -1.9
HMGN1P28-201ENST00000521340 POLR3CQ9BUI4 534 aaPredicted RBP3.17□□□□□ -1.9
HMGN1P28-201ENST00000521340 SLC5A7Q9GZV3 580 aa3.17□□□□□ -1.9
HMGN1P28-201ENST00000521340 LSG1Q9H089 658 aaKnown RBP3.17□□□□□ -1.9
HMGN1P28-201ENST00000521340 SHARPINQ9H0F6 387 aa3.17□□□□□ -1.9
HMGN1P28-201ENST00000521340 S1PR5Q9H228 398 aa3.17□□□□□ -1.9
HMGN1P28-201ENST00000521340 ACTL8Q9H568 366 aa3.17□□□□□ -1.9
HMGN1P28-201ENST00000521340 GKN1Q9NS71 199 aa3.17□□□□□ -1.9
HMGN1P28-201ENST00000521340 TXNDC16Q9P2K2 825 aa3.17□□□□□ -1.9
HMGN1P28-201ENST00000521340 VDAC3Q9Y277 283 aa3.17□□□□□ -1.9
HMGN1P28-201ENST00000521340 SMARCA4P51532 1647 aa3.17□□□□□ -1.9
HMGN1P28-201ENST00000521340 MROH2BQ7Z745 1585 aa3.17□□□□□ -1.9
HMGN1P28-201ENST00000521340 ARID2Q68CP9 1835 aa3.16□□□□□ -1.9
HMGN1P28-201ENST00000521340 TOP2AP11388 1531 aaKnown RBP3.16□□□□□ -1.9
HMGN1P28-201ENST00000521340 A0A1W2PS18 150 aa3.16□□□□□ -1.9
HMGN1P28-201ENST00000521340 ILVBLA1L0T0 632 aa3.16□□□□□ -1.9
HMGN1P28-201ENST00000521340 PRAC2D3DTV9 90 aa3.16□□□□□ -1.9
HMGN1P28-201ENST00000521340 CTDSPLO15194 276 aa3.16□□□□□ -1.9
HMGN1P28-201ENST00000521340 TTI1O43156 1089 aa3.16□□□□□ -1.9
HMGN1P28-201ENST00000521340 ZBTB14O43829 449 aa3.16□□□□□ -1.9
HMGN1P28-201ENST00000521340 BCAS2O75934 225 aaPredicted RBP3.16□□□□□ -1.9
HMGN1P28-201ENST00000521340 TSHBP01222 138 aa3.16□□□□□ -1.9
HMGN1P28-201ENST00000521340 SERPING1P05155 500 aa3.16□□□□□ -1.9
HMGN1P28-201ENST00000521340 THEGLP0DJG4 465 aa3.16□□□□□ -1.9
HMGN1P28-201ENST00000521340 DAOP14920 347 aa3.16□□□□□ -1.9
HMGN1P28-201ENST00000521340 STMN1P16949 149 aa3.16□□□□□ -1.9
HMGN1P28-201ENST00000521340 SERPINB6P35237 376 aa3.16□□□□□ -1.9
HMGN1P28-201ENST00000521340 SOAT1P35610 550 aa3.16□□□□□ -1.9
HMGN1P28-201ENST00000521340 GNL1P36915 607 aaPredicted RBP3.16□□□□□ -1.9
HMGN1P28-201ENST00000521340 DCTP40126 519 aa3.16□□□□□ -1.9
HMGN1P28-201ENST00000521340 MAGEB1P43366 347 aa3.16□□□□□ -1.9
HMGN1P28-201ENST00000521340 GAS1P54826 345 aa3.16□□□□□ -1.9
HMGN1P28-201ENST00000521340 IL1RL1Q01638 556 aa3.16□□□□□ -1.9
HMGN1P28-201ENST00000521340 ARHGAP1Q07960 439 aa3.16□□□□□ -1.9
HMGN1P28-201ENST00000521340 PPA1Q15181 289 aa3.16□□□□□ -1.9
HMGN1P28-201ENST00000521340 KIF19Q2TAC6 998 aa3.16□□□□□ -1.9
HMGN1P28-201ENST00000521340 FUT11Q495W5 492 aa3.16□□□□□ -1.9
HMGN1P28-201ENST00000521340 DCAF10Q5QP82 559 aa3.16□□□□□ -1.9
HMGN1P28-201ENST00000521340 PRAMEF8Q5VWM4 474 aa3.16□□□□□ -1.9
HMGN1P28-201ENST00000521340 KLHL10Q6JEL2 608 aa3.16□□□□□ -1.9
HMGN1P28-201ENST00000521340 ZNF449Q6P9G9 518 aa3.16□□□□□ -1.9
HMGN1P28-201ENST00000521340 PRSS57Q6UWY2 283 aa3.16□□□□□ -1.9
HMGN1P28-201ENST00000521340 ZNF852Q6ZMS4 543 aa3.16□□□□□ -1.9
HMGN1P28-201ENST00000521340 TUBA1AQ71U36 451 aa3.16□□□□□ -1.9
HMGN1P28-201ENST00000521340 PRSS42Q7Z5A4 293 aa3.16□□□□□ -1.9
HMGN1P28-201ENST00000521340 CPEB2Q7Z5Q1 589 aaKnown RBP3.16□□□□□ -1.9
HMGN1P28-201ENST00000521340 GPR141Q7Z602 305 aa3.16□□□□□ -1.9
HMGN1P28-201ENST00000521340 MEX3DQ86XN8 651 aaKnown RBP3.16□□□□□ -1.9
HMGN1P28-201ENST00000521340 PPFIBP2Q8ND30 876 aa3.16□□□□□ -1.9
HMGN1P28-201ENST00000521340 OR4K1Q8NGD4 311 aa3.16□□□□□ -1.9
HMGN1P28-201ENST00000521340 ZNF473Q8WTR7 871 aaKnown RBP3.16□□□□□ -1.9
HMGN1P28-201ENST00000521340 MRPL38Q96DV4 380 aaKnown RBP3.16□□□□□ -1.9
HMGN1P28-201ENST00000521340 STAMBPL1Q96FJ0 436 aa3.16□□□□□ -1.9
HMGN1P28-201ENST00000521340 FCRL4Q96PJ5 515 aa3.16□□□□□ -1.9
HMGN1P28-201ENST00000521340 PANX3Q96QZ0 392 aa3.16□□□□□ -1.9
HMGN1P28-201ENST00000521340 TUBA1CQ9BQE3 449 aa3.16□□□□□ -1.9
HMGN1P28-201ENST00000521340 NTPCRQ9BSD7 190 aaKnown RBP3.16□□□□□ -1.9
HMGN1P28-201ENST00000521340 MIS18AQ9NYP9 233 aa3.16□□□□□ -1.9
HMGN1P28-201ENST00000521340 SPG21Q9NZD8 308 aa3.16□□□□□ -1.9
HMGN1P28-201ENST00000521340 ZDHHC2Q9UIJ5 367 aa3.16□□□□□ -1.9
HMGN1P28-201ENST00000521340 FBXL5Q9UKA1 691 aa3.16□□□□□ -1.9
HMGN1P28-201ENST00000521340 ACEP12821 1306 aa3.16□□□□□ -1.9
HMGN1P28-201ENST00000521340 IGLV5-45A0A087WSX0 123 aa3.15□□□□□ -1.91
HMGN1P28-201ENST00000521340 A0A1W2PN81 502 aa3.15□□□□□ -1.91
HMGN1P28-201ENST00000521340 C17orf105B2RV13 164 aa3.15□□□□□ -1.91
HMGN1P28-201ENST00000521340 KBTBD13C9JR72 458 aa3.15□□□□□ -1.91
HMGN1P28-201ENST00000521340 F8VVB4 439 aa3.15□□□□□ -1.91
HMGN1P28-201ENST00000521340 F8VWA3 439 aa3.15□□□□□ -1.91
HMGN1P28-201ENST00000521340 O00370 1275 aa3.15□□□□□ -1.91
HMGN1P28-201ENST00000521340 PRKNO60260 465 aaPredicted RBP3.15□□□□□ -1.91
HMGN1P28-201ENST00000521340 DDHD2O94830 711 aa3.15□□□□□ -1.91
HMGN1P28-201ENST00000521340 GLCEO94923 617 aa3.15□□□□□ -1.91
HMGN1P28-201ENST00000521340 LETM1O95202 739 aaPredicted RBP3.15□□□□□ -1.91
HMGN1P28-201ENST00000521340 PIGNO95427 931 aa3.15□□□□□ -1.91
HMGN1P28-201ENST00000521340 CXCL14O95715 111 aa3.15□□□□□ -1.91
HMGN1P28-201ENST00000521340 ALPLP05186 524 aa3.15□□□□□ -1.91
HMGN1P28-201ENST00000521340 NGFRP08138 427 aa3.15□□□□□ -1.91
HMGN1P28-201ENST00000521340 IGHV4-31P0DP07 118 aa3.15□□□□□ -1.91
HMGN1P28-201ENST00000521340 FGF5P12034 268 aa3.15□□□□□ -1.91
HMGN1P28-201ENST00000521340 F3P13726 295 aa3.15□□□□□ -1.91
HMGN1P28-201ENST00000521340 CHRNA7P36544 502 aa3.15□□□□□ -1.91
HMGN1P28-201ENST00000521340 MNDAP41218 407 aa3.15□□□□□ -1.91
HMGN1P28-201ENST00000521340 GLIPR1P48060 266 aa3.15□□□□□ -1.91
HMGN1P28-201ENST00000521340 MAZP56270 477 aaKnown RBP3.15□□□□□ -1.91
HMGN1P28-201ENST00000521340 GCNT1Q02742 428 aa3.15□□□□□ -1.91
HMGN1P28-201ENST00000521340 ILF2Q12905 390 aaKnown RBP3.15□□□□□ -1.91
HMGN1P28-201ENST00000521340 CBX3Q13185 183 aa3.15□□□□□ -1.91
HMGN1P28-201ENST00000521340 GPR33Q49SQ1 333 aa3.15□□□□□ -1.91
HMGN1P28-201ENST00000521340 KCTD11Q693B1 232 aa3.15□□□□□ -1.91
HMGN1P28-201ENST00000521340 RAB12Q6IQ22 244 aa3.15□□□□□ -1.91
HMGN1P28-201ENST00000521340 SPATA2LQ8IUW3 424 aaPredicted RBP3.15□□□□□ -1.91
HMGN1P28-201ENST00000521340 CCDC83Q8IWF9 413 aa3.15□□□□□ -1.91
HMGN1P28-201ENST00000521340 C4orf19Q8IY42 314 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms