RNA–Protein interactions for RNA: ENST00000521232.1

SQLE-205, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-205ENST00000521232 FBXO42Q6P3S6 717 aa16.33■□□□□ 0.2
SQLE-205ENST00000521232 SUSD1Q6UWL2 747 aa16.33■□□□□ 0.2
SQLE-205ENST00000521232 SPNS2Q8IVW8 549 aa16.33■□□□□ 0.2
SQLE-205ENST00000521232 CNTN4Q8IWV2 1026 aa16.33■□□□□ 0.2
SQLE-205ENST00000521232 KLHL7Q8IXQ5 586 aa16.33■□□□□ 0.2
SQLE-205ENST00000521232 TEX19Q8NA77 164 aa16.33■□□□□ 0.2
SQLE-205ENST00000521232 PTERQ96BW5 349 aa16.33■□□□□ 0.2
SQLE-205ENST00000521232 DPH7Q9BTV6 452 aa16.33■□□□□ 0.2
SQLE-205ENST00000521232 SLC25A23Q9BV35 468 aa16.33■□□□□ 0.2
SQLE-205ENST00000521232 CLMPQ9H6B4 373 aa16.33■□□□□ 0.2
SQLE-205ENST00000521232 CUTCQ9NTM9 273 aa16.33■□□□□ 0.2
SQLE-205ENST00000521232 RNF14Q9UBS8 474 aa16.33■□□□□ 0.2
SQLE-205ENST00000521232 PTRH2Q9Y3E5 179 aaKnown RBP16.33■□□□□ 0.2
SQLE-205ENST00000521232 RELNP78509 3460 aa16.33■□□□□ 0.2
SQLE-205ENST00000521232 PCSK5Q92824 1860 aa16.33■□□□□ 0.2
SQLE-205ENST00000521232 MDC1Q14676 2089 aaKnown RBP16.33■□□□□ 0.2
SQLE-205ENST00000521232 E7ENX8 843 aa16.32■□□□□ 0.2
SQLE-205ENST00000521232 CCDC188H7C350 402 aa16.32■□□□□ 0.2
SQLE-205ENST00000521232 VPS26AO75436 327 aa16.32■□□□□ 0.2
SQLE-205ENST00000521232 SLC16A8O95907 504 aa16.32■□□□□ 0.2
SQLE-205ENST00000521232 AHSGP02765 367 aa16.32■□□□□ 0.2
SQLE-205ENST00000521232 ALBP02768 609 aa16.32■□□□□ 0.2
SQLE-205ENST00000521232 PIM1P11309 404 aaPredicted RBP16.32■□□□□ 0.2
SQLE-205ENST00000521232 RPA3P35244 121 aaPredicted RBP16.32■□□□□ 0.2
SQLE-205ENST00000521232 FOLR3P41439 243 aa16.32■□□□□ 0.2
SQLE-205ENST00000521232 SKIV2L2P42285 1042 aaKnown RBP16.32■□□□□ 0.2
SQLE-205ENST00000521232 RRADP55042 308 aa16.32■□□□□ 0.2
SQLE-205ENST00000521232 VSX2P58304 361 aaPredicted RBP16.32■□□□□ 0.2
SQLE-205ENST00000521232 TAP2Q03519 686 aa16.32■□□□□ 0.2
SQLE-205ENST00000521232 PRDX1Q06830 199 aaKnown RBP16.32■□□□□ 0.2
SQLE-205ENST00000521232 ATP1A4Q13733 1029 aa16.32■□□□□ 0.2
SQLE-205ENST00000521232 SLC9A5Q14940 896 aa16.32■□□□□ 0.2
SQLE-205ENST00000521232 BBS9Q3SYG4 887 aa16.32■□□□□ 0.2
SQLE-205ENST00000521232 FRMPD2BQ6IN97 320 aa16.32■□□□□ 0.2
SQLE-205ENST00000521232 UGT3A1Q6NUS8 523 aa16.32■□□□□ 0.2
SQLE-205ENST00000521232 HIBCHQ6NVY1 386 aaPredicted RBP16.32■□□□□ 0.2
SQLE-205ENST00000521232 KIAA0408Q6ZU52 694 aa16.32■□□□□ 0.2
SQLE-205ENST00000521232 RNF44Q7L0R7 432 aa16.32■□□□□ 0.2
SQLE-205ENST00000521232 OVCH1Q7RTY7 1134 aa16.32■□□□□ 0.2
SQLE-205ENST00000521232 GALNT7Q86SF2 657 aa16.32■□□□□ 0.2
SQLE-205ENST00000521232 CPNE9Q8IYJ1 553 aa16.32■□□□□ 0.2
SQLE-205ENST00000521232 PDIK1LQ8N165 341 aa16.32■□□□□ 0.2
SQLE-205ENST00000521232 TTC29Q8NA56 475 aaPredicted RBP16.32■□□□□ 0.2
SQLE-205ENST00000521232 ZNF480Q8WV37 535 aa16.32■□□□□ 0.2
SQLE-205ENST00000521232 FKBP10Q96AY3 582 aa16.32■□□□□ 0.2
SQLE-205ENST00000521232 ACAT2Q9BWD1 397 aa16.32■□□□□ 0.2
SQLE-205ENST00000521232 SLC26A1Q9H2B4 701 aa16.32■□□□□ 0.2
SQLE-205ENST00000521232 PLAC1Q9HBJ0 212 aa16.32■□□□□ 0.2
SQLE-205ENST00000521232 SLC6A20Q9NP91 592 aa16.32■□□□□ 0.2
SQLE-205ENST00000521232 MRPS30Q9NP92 439 aaKnown RBP16.32■□□□□ 0.2
SQLE-205ENST00000521232 ANKMY1Q9P2S6 941 aa16.32■□□□□ 0.2
SQLE-205ENST00000521232 PCDHGB7Q9Y5F8 929 aa16.32■□□□□ 0.2
SQLE-205ENST00000521232 LOC105369274A0A096LPK9 316 aa16.31■□□□□ 0.2
SQLE-205ENST00000521232 LOC102723532A0A0G2JNH3 316 aa16.31■□□□□ 0.2
SQLE-205ENST00000521232 A0A0J9YVX5 310 aa16.31■□□□□ 0.2
SQLE-205ENST00000521232 NRP2O60462 931 aa16.31■□□□□ 0.2
SQLE-205ENST00000521232 OTX2P32243 289 aa16.31■□□□□ 0.2
SQLE-205ENST00000521232 PAFAH1B1P43034 410 aa16.31■□□□□ 0.2
SQLE-205ENST00000521232 CARSP49589 748 aaKnown RBP16.31■□□□□ 0.2
SQLE-205ENST00000521232 RELAQ04206 551 aa16.31■□□□□ 0.2
SQLE-205ENST00000521232 TEDDM1Q5T9Z0 273 aa16.31■□□□□ 0.2
SQLE-205ENST00000521232 LRRC8EQ6NSJ5 796 aa16.31■□□□□ 0.2
SQLE-205ENST00000521232 PIWIL4Q7Z3Z4 852 aaKnown RBP16.31■□□□□ 0.2
SQLE-205ENST00000521232 MRGPREQ86SM8 312 aa16.31■□□□□ 0.2
SQLE-205ENST00000521232 PAQR7Q86WK9 346 aa16.31■□□□□ 0.2
SQLE-205ENST00000521232 LRRC56Q8IYG6 542 aaPredicted RBP16.31■□□□□ 0.2
SQLE-205ENST00000521232 OR4N4Q8N0Y3 316 aa16.31■□□□□ 0.2
SQLE-205ENST00000521232 NACC2Q96BF6 587 aa16.31■□□□□ 0.2
SQLE-205ENST00000521232 LRRC39Q96DD0 335 aa16.31■□□□□ 0.2
SQLE-205ENST00000521232 CERS2Q96G23 380 aa16.31■□□□□ 0.2
SQLE-205ENST00000521232 PWWP2AQ96N64 755 aa16.31■□□□□ 0.2
SQLE-205ENST00000521232 ZFYVE21Q9BQ24 234 aa16.31■□□□□ 0.2
SQLE-205ENST00000521232 PLCD4Q9BRC7 762 aa16.31■□□□□ 0.2
SQLE-205ENST00000521232 WDR54Q9H977 334 aa16.31■□□□□ 0.2
SQLE-205ENST00000521232 TAS2R13Q9NYV9 303 aa16.31■□□□□ 0.2
SQLE-205ENST00000521232 ZC3H7BQ9UGR2 993 aaKnown RBP16.31■□□□□ 0.2
SQLE-205ENST00000521232 TEX264Q9Y6I9 313 aa16.31■□□□□ 0.2
SQLE-205ENST00000521232 RP1L1Q8IWN7 2480 aaPredicted RBP16.3■□□□□ 0.2
SQLE-205ENST00000521232 IGKV1-8A0A0C4DH67 115 aa16.3■□□□□ 0.2
SQLE-205ENST00000521232 HYKKA2RU49 373 aa16.3■□□□□ 0.2
SQLE-205ENST00000521232 FANCGO15287 622 aa16.3■□□□□ 0.2
SQLE-205ENST00000521232 TP73O15350 636 aa16.3■□□□□ 0.2
SQLE-205ENST00000521232 TTI1O43156 1089 aa16.3■□□□□ 0.2
SQLE-205ENST00000521232 CCNDBP1O95273 360 aa16.3■□□□□ 0.2
SQLE-205ENST00000521232 UMODP07911 640 aa16.3■□□□□ 0.2
SQLE-205ENST00000521232 ELK3P41970 407 aa16.3■□□□□ 0.2
SQLE-205ENST00000521232 PGDP52209 483 aa16.3■□□□□ 0.2
SQLE-205ENST00000521232 ABATP80404 500 aa16.3■□□□□ 0.2
SQLE-205ENST00000521232 ICE2Q659A1 982 aa16.3■□□□□ 0.2
SQLE-205ENST00000521232 ZNF425Q6IV72 752 aa16.3■□□□□ 0.2
SQLE-205ENST00000521232 UBE2R2Q712K3 238 aaPredicted RBP16.3■□□□□ 0.2
SQLE-205ENST00000521232 COX15Q7KZN9 410 aa16.3■□□□□ 0.2
SQLE-205ENST00000521232 PPFIBP2Q8ND30 876 aa16.3■□□□□ 0.2
SQLE-205ENST00000521232 FDCSPQ8NFU4 85 aa16.3■□□□□ 0.2
SQLE-205ENST00000521232 EEF1AKMT1Q8WVE0 214 aa16.3■□□□□ 0.2
SQLE-205ENST00000521232 FER1L6-AS2Q96M78 137 aa16.3■□□□□ 0.2
SQLE-205ENST00000521232 NDNQ99608 321 aa16.3■□□□□ 0.2
SQLE-205ENST00000521232 TAC3Q9UHF0 121 aa16.3■□□□□ 0.2
SQLE-205ENST00000521232 TRMT6Q9UJA5 497 aaKnown RBP16.3■□□□□ 0.2
SQLE-205ENST00000521232 COL12A1Q99715 3063 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms