RNA–Protein interactions for RNA: ENST00000520265.1

VEGFA-221, Transcript of vascular endothelial growth factor A, humanhuman

TSL 5

Gene VEGFA, Length 336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-221ENST00000520265 E7ESA3 106 aa13.59□□□□□ -0.23
VEGFA-221ENST00000520265 EIF3FO00303 357 aaPredicted RBP13.59□□□□□ -0.23
VEGFA-221ENST00000520265 NRP2O60462 931 aa13.59□□□□□ -0.23
VEGFA-221ENST00000520265 FURINP09958 794 aa13.59□□□□□ -0.23
VEGFA-221ENST00000520265 SFTPCP11686 197 aa13.59□□□□□ -0.23
VEGFA-221ENST00000520265 TBPL1P62380 186 aa13.59□□□□□ -0.23
VEGFA-221ENST00000520265 DCDP81605 110 aaKnown RBP13.59□□□□□ -0.23
VEGFA-221ENST00000520265 NFKB2Q00653 900 aa13.59□□□□□ -0.23
VEGFA-221ENST00000520265 CAV1Q03135 178 aa13.59□□□□□ -0.23
VEGFA-221ENST00000520265 CHAF1BQ13112 559 aa13.59□□□□□ -0.23
VEGFA-221ENST00000520265 IL10RAQ13651 578 aa13.59□□□□□ -0.23
VEGFA-221ENST00000520265 ZNF460Q14592 562 aa13.59□□□□□ -0.23
VEGFA-221ENST00000520265 GRM7Q14831 915 aa13.59□□□□□ -0.23
VEGFA-221ENST00000520265 NCF4Q15080 339 aa13.59□□□□□ -0.23
VEGFA-221ENST00000520265 WHAMMP3Q1A5X7 153 aa13.59□□□□□ -0.23
VEGFA-221ENST00000520265 TCTE1Q5JU00 501 aa13.59□□□□□ -0.23
VEGFA-221ENST00000520265 PRAMEF13Q5VWM6 474 aa13.59□□□□□ -0.23
VEGFA-221ENST00000520265 ICE2Q659A1 982 aa13.59□□□□□ -0.23
VEGFA-221ENST00000520265 DUPD1Q68J44 220 aa13.59□□□□□ -0.23
VEGFA-221ENST00000520265 RHBDD2Q6NTF9 364 aa13.59□□□□□ -0.23
VEGFA-221ENST00000520265 FAM198BQ6UWH4 519 aa13.59□□□□□ -0.23
VEGFA-221ENST00000520265 ZNF843Q8N446 348 aa13.59□□□□□ -0.23
VEGFA-221ENST00000520265 OR2A1Q8NGT9 310 aa13.59□□□□□ -0.23
VEGFA-221ENST00000520265 HMGCLL1Q8TB92 370 aa13.59□□□□□ -0.23
VEGFA-221ENST00000520265 PROKR1Q8TCW9 393 aa13.59□□□□□ -0.23
VEGFA-221ENST00000520265 RERGQ96A58 199 aaPredicted RBP13.59□□□□□ -0.23
VEGFA-221ENST00000520265 ZUFSPQ96AP4 578 aa13.59□□□□□ -0.23
VEGFA-221ENST00000520265 CABS1Q96KC9 395 aa13.59□□□□□ -0.23
VEGFA-221ENST00000520265 OLFM1Q99784 485 aa13.59□□□□□ -0.23
VEGFA-221ENST00000520265 DPH2Q9BQC3 489 aaPredicted RBP13.59□□□□□ -0.23
VEGFA-221ENST00000520265 NLNQ9BYT8 704 aa13.59□□□□□ -0.23
VEGFA-221ENST00000520265 TRIM54Q9BYV2 358 aa13.59□□□□□ -0.23
VEGFA-221ENST00000520265 CHRNA10Q9GZZ6 450 aa13.59□□□□□ -0.23
VEGFA-221ENST00000520265 ZNF71Q9NQZ8 489 aaPredicted RBP13.59□□□□□ -0.23
VEGFA-221ENST00000520265 ARL15Q9NXU5 204 aa13.59□□□□□ -0.23
VEGFA-221ENST00000520265 GRHL1Q9NZI5 618 aa13.59□□□□□ -0.23
VEGFA-221ENST00000520265 PTRH2Q9Y3E5 179 aaKnown RBP13.59□□□□□ -0.23
VEGFA-221ENST00000520265 PCDHGA6Q9Y5G7 932 aa13.59□□□□□ -0.23
VEGFA-221ENST00000520265 TARM1B6A8C7 271 aa13.58□□□□□ -0.24
VEGFA-221ENST00000520265 TERTO14746 1132 aaKnown RBP13.58□□□□□ -0.24
VEGFA-221ENST00000520265 TP73O15350 636 aa13.58□□□□□ -0.24
VEGFA-221ENST00000520265 EIF3HO15372 352 aaKnown RBP eCLIP13.58□□□□□ -0.245e-6■□□□□ 8.9
VEGFA-221ENST00000520265 CTSVO60911 334 aa13.58□□□□□ -0.24
VEGFA-221ENST00000520265 C1QL1O75973 258 aa13.58□□□□□ -0.24
VEGFA-221ENST00000520265 GUCA1CO95843 209 aa13.58□□□□□ -0.24
VEGFA-221ENST00000520265 FDXRP22570 491 aa13.58□□□□□ -0.24
VEGFA-221ENST00000520265 IMPA1P29218 277 aa13.58□□□□□ -0.24
VEGFA-221ENST00000520265 FOLR3P41439 243 aa13.58□□□□□ -0.24
VEGFA-221ENST00000520265 GABRA4P48169 554 aa13.58□□□□□ -0.24
VEGFA-221ENST00000520265 ARSFP54793 590 aa13.58□□□□□ -0.24
VEGFA-221ENST00000520265 YBX1P67809 324 aaKnown RBP13.58□□□□□ -0.24
VEGFA-221ENST00000520265 GUCY2DQ02846 1103 aa13.58□□□□□ -0.24
VEGFA-221ENST00000520265 SP140Q13342 867 aa13.58□□□□□ -0.24
VEGFA-221ENST00000520265 UGT8Q16880 541 aa13.58□□□□□ -0.24
VEGFA-221ENST00000520265 WASHC2DQ5SRD0 308 aa13.58□□□□□ -0.24
VEGFA-221ENST00000520265 FRMPD2BQ6IN97 320 aa13.58□□□□□ -0.24
VEGFA-221ENST00000520265 CYHR1Q6ZMK1 362 aa13.58□□□□□ -0.24
VEGFA-221ENST00000520265 FRA10AC1Q70Z53 315 aa13.58□□□□□ -0.24
VEGFA-221ENST00000520265 GALNT7Q86SF2 657 aa13.58□□□□□ -0.24
VEGFA-221ENST00000520265 ZNF605Q86T29 641 aa13.58□□□□□ -0.24
VEGFA-221ENST00000520265 SLC26A11Q86WA9 606 aa13.58□□□□□ -0.24
VEGFA-221ENST00000520265 MNS1Q8NEH6 495 aa13.58□□□□□ -0.24
VEGFA-221ENST00000520265 C9orf43Q8TAL5 461 aaPredicted RBP13.58□□□□□ -0.24
VEGFA-221ENST00000520265 FBXO25Q8TCJ0 367 aa13.58□□□□□ -0.24
VEGFA-221ENST00000520265 VPS39Q96JC1 886 aa13.58□□□□□ -0.24
VEGFA-221ENST00000520265 CCDC138Q96M89 665 aa13.58□□□□□ -0.24
VEGFA-221ENST00000520265 ZFYVE21Q9BQ24 234 aa13.58□□□□□ -0.24
VEGFA-221ENST00000520265 YIPF2Q9BWQ6 316 aa13.58□□□□□ -0.24
VEGFA-221ENST00000520265 ATG10Q9H0Y0 220 aa13.58□□□□□ -0.24
VEGFA-221ENST00000520265 PARVBQ9HBI1 364 aa13.58□□□□□ -0.24
VEGFA-221ENST00000520265 ACSS2Q9NR19 701 aa13.58□□□□□ -0.24
VEGFA-221ENST00000520265 CUTCQ9NTM9 273 aa13.58□□□□□ -0.24
VEGFA-221ENST00000520265 STOX2Q9P2F5 926 aaPredicted RBP13.58□□□□□ -0.24
VEGFA-221ENST00000520265 TCFL5Q9UL49 500 aa13.58□□□□□ -0.24
VEGFA-221ENST00000520265 PDE10AQ9Y233 779 aa13.58□□□□□ -0.24
VEGFA-221ENST00000520265 MAU2Q9Y6X3 613 aa13.58□□□□□ -0.24
VEGFA-221ENST00000520265 ATMQ13315 3056 aa13.58□□□□□ -0.24
VEGFA-221ENST00000520265 A0A1B0GX78 115 aa13.57□□□□□ -0.24
VEGFA-221ENST00000520265 NPEPPSL1A6NEC2 478 aa13.57□□□□□ -0.24
VEGFA-221ENST00000520265 E7ENX8 843 aa13.57□□□□□ -0.24
VEGFA-221ENST00000520265 GFYI3L273 518 aa13.57□□□□□ -0.24
VEGFA-221ENST00000520265 PRICKLE3O43900 615 aaPredicted RBP13.57□□□□□ -0.24
VEGFA-221ENST00000520265 STATHP02808 62 aa13.57□□□□□ -0.24
VEGFA-221ENST00000520265 RAB40ALP0C0E4 278 aa13.57□□□□□ -0.24
VEGFA-221ENST00000520265 ERGP11308 486 aa13.57□□□□□ -0.24
VEGFA-221ENST00000520265 TIAL1Q01085 375 aaKnown RBP eCLIP13.57□□□□□ -0.24
VEGFA-221ENST00000520265 TAP2Q03519 686 aa13.57□□□□□ -0.24
VEGFA-221ENST00000520265 NAE1Q13564 534 aa13.57□□□□□ -0.24
VEGFA-221ENST00000520265 FRG1Q14331 258 aaKnown RBP13.57□□□□□ -0.24
VEGFA-221ENST00000520265 SLMAPQ14BN4 828 aa13.57□□□□□ -0.24
VEGFA-221ENST00000520265 NKAIN1Q4KMZ8 207 aa13.57□□□□□ -0.24
VEGFA-221ENST00000520265 C3orf62Q6ZUJ4 267 aa13.57□□□□□ -0.24
VEGFA-221ENST00000520265 ZC3HC1Q86WB0 502 aaKnown RBP13.57□□□□□ -0.24
VEGFA-221ENST00000520265 PTRH1Q86Y79 214 aaKnown RBP13.57□□□□□ -0.24
VEGFA-221ENST00000520265 RAB43Q86YS6 212 aa13.57□□□□□ -0.24
VEGFA-221ENST00000520265 PLD3Q8IV08 490 aa13.57□□□□□ -0.24
VEGFA-221ENST00000520265 FBXO15Q8NCQ5 510 aaPredicted RBP13.57□□□□□ -0.24
VEGFA-221ENST00000520265 COL26A1Q96A83 441 aa13.57□□□□□ -0.24
VEGFA-221ENST00000520265 GBP5Q96PP8 586 aa13.57□□□□□ -0.24
VEGFA-221ENST00000520265 EGFL8Q99944 293 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms