RNA–Protein interactions for RNA: ENST00000520002.5

CSMD1-206, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-206ENST00000520002 GPC2Q8N158 579 aa8.51□□□□□ -1.05
CSMD1-206ENST00000520002 MKRN2Q9H000 416 aaKnown RBP8.51□□□□□ -1.05
CSMD1-206ENST00000520002 MRPS33Q9Y291 106 aaKnown RBP8.51□□□□□ -1.05
CSMD1-206ENST00000520002 MYPNQ86TC9 1320 aa8.51□□□□□ -1.05
CSMD1-206ENST00000520002 ZNF705GA8MUZ8 300 aaPredicted RBP8.51□□□□□ -1.05
CSMD1-206ENST00000520002 PEPDP12955 493 aa8.51□□□□□ -1.05
CSMD1-206ENST00000520002 OR1D2P34982 312 aa8.51□□□□□ -1.05
CSMD1-206ENST00000520002 DUSP4Q13115 394 aa8.51□□□□□ -1.05
CSMD1-206ENST00000520002 SP140Q13342 867 aa8.51□□□□□ -1.05
CSMD1-206ENST00000520002 TCTEX1D2Q8WW35 142 aa8.51□□□□□ -1.05
CSMD1-206ENST00000520002 HSD17B14Q9BPX1 270 aa8.51□□□□□ -1.05
CSMD1-206ENST00000520002 FAM53CQ9NYF3 392 aa8.51□□□□□ -1.05
CSMD1-206ENST00000520002 ZNF254O75437 659 aa8.51□□□□□ -1.05
CSMD1-206ENST00000520002 RBM34P42696 430 aaKnown RBP8.51□□□□□ -1.05
CSMD1-206ENST00000520002 MECP2P51608 486 aaKnown RBP8.51□□□□□ -1.05
CSMD1-206ENST00000520002 IRF9Q00978 393 aa8.51□□□□□ -1.05
CSMD1-206ENST00000520002 C11orf91Q3C1V1 193 aa8.51□□□□□ -1.05
CSMD1-206ENST00000520002 FAM174BQ3ZCQ3 159 aa8.51□□□□□ -1.05
CSMD1-206ENST00000520002 FAM46CQ5VWP2 391 aa8.51□□□□□ -1.05
CSMD1-206ENST00000520002 IFNL1Q8IU54 200 aa8.51□□□□□ -1.05
CSMD1-206ENST00000520002 BTN2A3PQ96KV6 586 aa8.51□□□□□ -1.05
CSMD1-206ENST00000520002 KXD1Q9BQD3 176 aa8.51□□□□□ -1.05
CSMD1-206ENST00000520002 ARFGEF2Q9Y6D5 1785 aa8.51□□□□□ -1.05
CSMD1-206ENST00000520002 BCL9O00512 1426 aa8.51□□□□□ -1.05
CSMD1-206ENST00000520002 OR2AG2A6NM03 316 aa8.51□□□□□ -1.05
CSMD1-206ENST00000520002 WNT7AO00755 349 aa8.51□□□□□ -1.05
CSMD1-206ENST00000520002 COQ9O75208 318 aa8.51□□□□□ -1.05
CSMD1-206ENST00000520002 C2P06681 752 aa8.51□□□□□ -1.05
CSMD1-206ENST00000520002 RGS8P57771 180 aaPredicted RBP8.51□□□□□ -1.05
CSMD1-206ENST00000520002 CACNG1Q06432 222 aa8.51□□□□□ -1.05
CSMD1-206ENST00000520002 GALEQ14376 348 aa8.51□□□□□ -1.05
CSMD1-206ENST00000520002 LAPTM4AQ15012 233 aa8.51□□□□□ -1.05
CSMD1-206ENST00000520002 ALG1LQ6GMV1 187 aa8.51□□□□□ -1.05
CSMD1-206ENST00000520002 C6orf89Q6UWU4 347 aa8.51□□□□□ -1.05
CSMD1-206ENST00000520002 PLD5Q8N7P1 536 aa8.51□□□□□ -1.05
CSMD1-206ENST00000520002 PSD4Q8NDX1 1056 aa8.51□□□□□ -1.05
CSMD1-206ENST00000520002 FTHL17Q9BXU8 183 aa8.51□□□□□ -1.05
CSMD1-206ENST00000520002 HMX1Q9NP08 348 aaPredicted RBP8.51□□□□□ -1.05
CSMD1-206ENST00000520002 PCDHAC2Q9Y5I4 1007 aa8.51□□□□□ -1.05
CSMD1-206ENST00000520002 ATRNO75882 1429 aa8.51□□□□□ -1.05
CSMD1-206ENST00000520002 RFPL1O75677 317 aa8.51□□□□□ -1.05
CSMD1-206ENST00000520002 RYKP34925 604 aa8.51□□□□□ -1.05
CSMD1-206ENST00000520002 DEFA6Q01524 100 aa8.51□□□□□ -1.05
CSMD1-206ENST00000520002 HSPB3Q12988 150 aa8.51□□□□□ -1.05
CSMD1-206ENST00000520002 LCP2Q13094 533 aa8.51□□□□□ -1.05
CSMD1-206ENST00000520002 PPTC7Q8NI37 304 aa8.51□□□□□ -1.05
CSMD1-206ENST00000520002 PIGXQ8TBF5 258 aa8.51□□□□□ -1.05
CSMD1-206ENST00000520002 ANKHQ9HCJ1 492 aa8.51□□□□□ -1.05
CSMD1-206ENST00000520002 UBIAD1Q9Y5Z9 338 aa8.51□□□□□ -1.05
CSMD1-206ENST00000520002 FAM237AA0A1B0GTK4 181 aa8.51□□□□□ -1.05
CSMD1-206ENST00000520002 NT5C1B-RDH14C9J2C7 533 aa8.51□□□□□ -1.05
CSMD1-206ENST00000520002 SCELO95171 688 aa8.51□□□□□ -1.05
CSMD1-206ENST00000520002 RAP2AP10114 183 aa8.51□□□□□ -1.05
CSMD1-206ENST00000520002 CDH5P33151 784 aaPredicted RBP8.51□□□□□ -1.05
CSMD1-206ENST00000520002 RGS6P49758 472 aa8.51□□□□□ -1.05
CSMD1-206ENST00000520002 LRRC66Q68CR7 880 aa8.51□□□□□ -1.05
CSMD1-206ENST00000520002 FSTL4Q6MZW2 842 aa8.51□□□□□ -1.05
CSMD1-206ENST00000520002 ARSKQ6UWY0 536 aa8.51□□□□□ -1.05
CSMD1-206ENST00000520002 CRYBG2Q8N1P7 616 aa8.51□□□□□ -1.05
CSMD1-206ENST00000520002 FAM109AQ8N4B1 249 aa8.51□□□□□ -1.05
CSMD1-206ENST00000520002 MFSD8Q8NHS3 518 aa8.51□□□□□ -1.05
CSMD1-206ENST00000520002 SNX33Q8WV41 574 aa8.51□□□□□ -1.05
CSMD1-206ENST00000520002 DHX33Q9H6R0 707 aaKnown RBP8.51□□□□□ -1.05
CSMD1-206ENST00000520002 MSRAQ9UJ68 235 aa8.51□□□□□ -1.05
CSMD1-206ENST00000520002 NUAK1O60285 661 aa8.51□□□□□ -1.05
CSMD1-206ENST00000520002 GCATO75600 419 aa8.51□□□□□ -1.05
CSMD1-206ENST00000520002 HOXB6P17509 224 aaKnown RBP8.51□□□□□ -1.05
CSMD1-206ENST00000520002 GNALP38405 381 aa8.51□□□□□ -1.05
CSMD1-206ENST00000520002 EVX2Q03828 476 aa8.51□□□□□ -1.05
CSMD1-206ENST00000520002 DCDC5Q6ZRR9 648 aa8.51□□□□□ -1.05
CSMD1-206ENST00000520002 DEFB132Q7Z7B7 95 aa8.51□□□□□ -1.05
CSMD1-206ENST00000520002 CREB3L1Q96BA8 519 aa8.51□□□□□ -1.05
CSMD1-206ENST00000520002 FGFBP2Q9BYJ0 223 aa8.51□□□□□ -1.05
CSMD1-206ENST00000520002 PLEKHA1Q9HB21 404 aa8.51□□□□□ -1.05
CSMD1-206ENST00000520002 A8MUA0 341 aa8.51□□□□□ -1.05
CSMD1-206ENST00000520002 CLDN9O95484 217 aa8.51□□□□□ -1.05
CSMD1-206ENST00000520002 DNASE1P24855 282 aa8.51□□□□□ -1.05
CSMD1-206ENST00000520002 TAF10Q12962 218 aa8.51□□□□□ -1.05
CSMD1-206ENST00000520002 MSANTD2Q6P1R3 559 aa8.51□□□□□ -1.05
CSMD1-206ENST00000520002 SLC26A9Q7LBE3 791 aa8.51□□□□□ -1.05
CSMD1-206ENST00000520002 ZNF598Q86UK7 904 aaKnown RBP8.51□□□□□ -1.05
CSMD1-206ENST00000520002 MON1AQ86VX9 555 aa8.51□□□□□ -1.05
CSMD1-206ENST00000520002 ACBD4Q8NC06 268 aa8.51□□□□□ -1.05
CSMD1-206ENST00000520002 ZMIZ2Q8NF64 920 aa8.51□□□□□ -1.05
CSMD1-206ENST00000520002 CNIH3Q8TBE1 160 aa8.51□□□□□ -1.05
CSMD1-206ENST00000520002 DDX1Q92499 740 aaKnown RBP8.51□□□□□ -1.05
CSMD1-206ENST00000520002 AGAP2Q99490 1192 aa8.51□□□□□ -1.05
CSMD1-206ENST00000520002 YTHDF1Q9BYJ9 559 aaKnown RBP8.51□□□□□ -1.05
CSMD1-206ENST00000520002 PARP4Q9UKK3 1724 aaKnown RBP8.51□□□□□ -1.05
CSMD1-206ENST00000520002 SSX4O60224 188 aa8.5□□□□□ -1.05
CSMD1-206ENST00000520002 PROS1P07225 676 aa8.5□□□□□ -1.05
CSMD1-206ENST00000520002 GNAZP19086 355 aa8.5□□□□□ -1.05
CSMD1-206ENST00000520002 FADDQ13158 208 aa8.5□□□□□ -1.05
CSMD1-206ENST00000520002 ZNF425Q6IV72 752 aa8.5□□□□□ -1.05
CSMD1-206ENST00000520002 DCLRE1AQ6PJP8 1040 aa8.5□□□□□ -1.05
CSMD1-206ENST00000520002 XYLT1Q86Y38 959 aa8.5□□□□□ -1.05
CSMD1-206ENST00000520002 ZNF420Q8TAQ5 688 aaPredicted RBP8.5□□□□□ -1.05
CSMD1-206ENST00000520002 TMEM109Q9BVC6 243 aa8.5□□□□□ -1.05
CSMD1-206ENST00000520002 ARL6Q9H0F7 186 aa8.5□□□□□ -1.05
CSMD1-206ENST00000520002 GSKIPQ9P0R6 139 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms