RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 HCKP08631 526 aa-1.17□□□□□ -2.6
RNU6-542P-201ENST00000516405 UQCRFS1P1P0C7P4 283 aa-1.17□□□□□ -2.6
RNU6-542P-201ENST00000516405 SLC2A4P14672 509 aa-1.17□□□□□ -2.6
RNU6-542P-201ENST00000516405 UGT1A6P19224 532 aa-1.17□□□□□ -2.6
RNU6-542P-201ENST00000516405 RPA1P27694 616 aa-1.17□□□□□ -2.6
RNU6-542P-201ENST00000516405 ACVR1BP36896 505 aa-1.17□□□□□ -2.6
RNU6-542P-201ENST00000516405 CD81P60033 236 aa-1.17□□□□□ -2.6
RNU6-542P-201ENST00000516405 SORDQ00796 357 aa-1.17□□□□□ -2.6
RNU6-542P-201ENST00000516405 ZNF45Q02386 682 aa-1.17□□□□□ -2.6
RNU6-542P-201ENST00000516405 PAX2Q02962 417 aa-1.17□□□□□ -2.6
RNU6-542P-201ENST00000516405 UPP1Q16831 310 aa-1.17□□□□□ -2.6
RNU6-542P-201ENST00000516405 BTBD16Q32M84 506 aa-1.17□□□□□ -2.6
RNU6-542P-201ENST00000516405 EDRF1Q3B7T1 1238 aa-1.17□□□□□ -2.6
RNU6-542P-201ENST00000516405 TRIM60Q495X7 471 aa-1.17□□□□□ -2.6
RNU6-542P-201ENST00000516405 SOWAHCQ53LP3 525 aaPredicted RBP-1.17□□□□□ -2.6
RNU6-542P-201ENST00000516405 COBLL1Q53SF7 1204 aa-1.17□□□□□ -2.6
RNU6-542P-201ENST00000516405 TMEM240Q5SV17 173 aa-1.17□□□□□ -2.6
RNU6-542P-201ENST00000516405 KLHDC7AQ5VTJ3 777 aa-1.17□□□□□ -2.6
RNU6-542P-201ENST00000516405 SIGIRRQ6IA17 410 aa-1.17□□□□□ -2.6
RNU6-542P-201ENST00000516405 PQLC2Q6ZP29 291 aa-1.17□□□□□ -2.6
RNU6-542P-201ENST00000516405 PM20D2Q8IYS1 436 aa-1.17□□□□□ -2.6
RNU6-542P-201ENST00000516405 KIAA0319LQ8IZA0 1049 aa-1.17□□□□□ -2.6
RNU6-542P-201ENST00000516405 ZCCHC9Q8N567 271 aaKnown RBP-1.17□□□□□ -2.6
RNU6-542P-201ENST00000516405 THAP8Q8NA92 274 aa-1.17□□□□□ -2.6
RNU6-542P-201ENST00000516405 ATL2Q8NHH9 583 aa-1.17□□□□□ -2.6
RNU6-542P-201ENST00000516405 KCNE4Q8WWG9 221 aa-1.17□□□□□ -2.6
RNU6-542P-201ENST00000516405 C11orf52Q96A22 123 aa-1.17□□□□□ -2.6
RNU6-542P-201ENST00000516405 SLC41A2Q96JW4 573 aa-1.17□□□□□ -2.6
RNU6-542P-201ENST00000516405 STRBPQ96SI9 672 aaKnown RBP-1.17□□□□□ -2.6
RNU6-542P-201ENST00000516405 FAM110AQ9BQ89 295 aa-1.17□□□□□ -2.6
RNU6-542P-201ENST00000516405 USP44Q9H0E7 712 aa-1.17□□□□□ -2.6
RNU6-542P-201ENST00000516405 SEMA6AQ9H2E6 1030 aa-1.17□□□□□ -2.6
RNU6-542P-201ENST00000516405 IL1RAPQ9NPH3 570 aa-1.17□□□□□ -2.6
RNU6-542P-201ENST00000516405 LHX9Q9NQ69 397 aa-1.17□□□□□ -2.6
RNU6-542P-201ENST00000516405 LNPEPQ9UIQ6 1025 aa-1.17□□□□□ -2.6
RNU6-542P-201ENST00000516405 TBX21Q9UL17 535 aa-1.17□□□□□ -2.6
RNU6-542P-201ENST00000516405 L1RE1Q9UN81 338 aa-1.17□□□□□ -2.6
RNU6-542P-201ENST00000516405 EID1Q9Y6B2 187 aa-1.17□□□□□ -2.6
RNU6-542P-201ENST00000516405 KMT2CQ8NEZ4 4911 aaKnown RBP-1.17□□□□□ -2.6
RNU6-542P-201ENST00000516405 TICRRQ7Z2Z1 1910 aa-1.17□□□□□ -2.6
RNU6-542P-201ENST00000516405 DOCK10Q96BY6 2186 aa-1.17□□□□□ -2.6
RNU6-542P-201ENST00000516405 PLA2R1Q13018 1463 aa-1.18□□□□□ -2.6
RNU6-542P-201ENST00000516405 A0A096LNJ9 63 aa-1.18□□□□□ -2.6
RNU6-542P-201ENST00000516405 A0A1W2PRB8 838 aa-1.18□□□□□ -2.6
RNU6-542P-201ENST00000516405 KANSL1LA0AUZ9 987 aa-1.18□□□□□ -2.6
RNU6-542P-201ENST00000516405 OR2M5A3KFT3 312 aa-1.18□□□□□ -2.6
RNU6-542P-201ENST00000516405 PABPN1LA6NDY0 278 aaKnown RBP-1.18□□□□□ -2.6
RNU6-542P-201ENST00000516405 GFYI3L273 518 aa-1.18□□□□□ -2.6
RNU6-542P-201ENST00000516405 SAP18O00422 153 aaKnown RBP-1.18□□□□□ -2.6
RNU6-542P-201ENST00000516405 DNPH1O43598 174 aa-1.18□□□□□ -2.6
RNU6-542P-201ENST00000516405 KATNA1O75449 491 aa-1.18□□□□□ -2.6
RNU6-542P-201ENST00000516405 ECDO95905 644 aaPredicted RBP-1.18□□□□□ -2.6
RNU6-542P-201ENST00000516405 IGHG3P01860 377 aa-1.18□□□□□ -2.6
RNU6-542P-201ENST00000516405 IRF1P10914 325 aa-1.18□□□□□ -2.6
RNU6-542P-201ENST00000516405 IDEP14735 1019 aa-1.18□□□□□ -2.6
RNU6-542P-201ENST00000516405 FGFR2P21802 821 aa-1.18□□□□□ -2.6
RNU6-542P-201ENST00000516405 DNASE1P24855 282 aa-1.18□□□□□ -2.6
RNU6-542P-201ENST00000516405 TIA1P31483 386 aaKnown RBP eCLIP-1.18□□□□□ -2.6
RNU6-542P-201ENST00000516405 HNF1BP35680 557 aa-1.18□□□□□ -2.6
RNU6-542P-201ENST00000516405 BLKP51451 505 aa-1.18□□□□□ -2.6
RNU6-542P-201ENST00000516405 LBX1P52954 281 aa-1.18□□□□□ -2.6
RNU6-542P-201ENST00000516405 RAG2P55895 527 aa-1.18□□□□□ -2.6
RNU6-542P-201ENST00000516405 EVA1CP58658 441 aa-1.18□□□□□ -2.6
RNU6-542P-201ENST00000516405 CDK3Q00526 305 aa-1.18□□□□□ -2.6
RNU6-542P-201ENST00000516405 GCNT1Q02742 428 aa-1.18□□□□□ -2.6
RNU6-542P-201ENST00000516405 MAD2L1Q13257 205 aaPredicted RBP-1.18□□□□□ -2.6
RNU6-542P-201ENST00000516405 NAE1Q13564 534 aa-1.18□□□□□ -2.6
RNU6-542P-201ENST00000516405 VWC2Q2TAL6 325 aa-1.18□□□□□ -2.6
RNU6-542P-201ENST00000516405 PRICKLE4Q2TBC4 344 aa-1.18□□□□□ -2.6
RNU6-542P-201ENST00000516405 TBRG1Q3YBR2 411 aa-1.18□□□□□ -2.6
RNU6-542P-201ENST00000516405 RUNDC3AQ59EK9 446 aa-1.18□□□□□ -2.6
RNU6-542P-201ENST00000516405 SLC10A5Q5PT55 438 aa-1.18□□□□□ -2.6
RNU6-542P-201ENST00000516405 FAM83BQ5T0W9 1011 aa-1.18□□□□□ -2.6
RNU6-542P-201ENST00000516405 JADE1Q6IE81 842 aa-1.18□□□□□ -2.6
RNU6-542P-201ENST00000516405 RHBDD2Q6NTF9 364 aa-1.18□□□□□ -2.6
RNU6-542P-201ENST00000516405 CTR9Q6PD62 1173 aa-1.18□□□□□ -2.6
RNU6-542P-201ENST00000516405 LEKR1Q6ZMV7 388 aa-1.18□□□□□ -2.6
RNU6-542P-201ENST00000516405 QSOX2Q6ZRP7 698 aa-1.18□□□□□ -2.6
RNU6-542P-201ENST00000516405 TMEM26Q6ZUK4 368 aa-1.18□□□□□ -2.6
RNU6-542P-201ENST00000516405 BRINP3Q76B58 766 aa-1.18□□□□□ -2.6
RNU6-542P-201ENST00000516405 DNAAF5Q86Y56 855 aa-1.18□□□□□ -2.6
RNU6-542P-201ENST00000516405 APOBEC3FQ8IUX4 373 aaKnown RBP-1.18□□□□□ -2.6
RNU6-542P-201ENST00000516405 DCAF4L2Q8NA75 395 aa-1.18□□□□□ -2.6
RNU6-542P-201ENST00000516405 FRZBQ92765 325 aa-1.18□□□□□ -2.6
RNU6-542P-201ENST00000516405 JAKMIP2Q96AA8 810 aa-1.18□□□□□ -2.6
RNU6-542P-201ENST00000516405 NABP1Q96AH0 204 aa-1.18□□□□□ -2.6
RNU6-542P-201ENST00000516405 SGK494Q96LW2 274 aa-1.18□□□□□ -2.6
RNU6-542P-201ENST00000516405 NPLQ9BXD5 320 aaPredicted RBP-1.18□□□□□ -2.6
RNU6-542P-201ENST00000516405 LRRC27Q9C0I9 530 aa-1.18□□□□□ -2.6
RNU6-542P-201ENST00000516405 P4HTMQ9NXG6 502 aa-1.18□□□□□ -2.6
RNU6-542P-201ENST00000516405 DACT1Q9NYF0 836 aa-1.18□□□□□ -2.6
RNU6-542P-201ENST00000516405 WDR35Q9P2L0 1181 aa-1.18□□□□□ -2.6
RNU6-542P-201ENST00000516405 KLHL21Q9UJP4 597 aa-1.18□□□□□ -2.6
RNU6-542P-201ENST00000516405 RPH3ALQ9UNE2 315 aa-1.18□□□□□ -2.6
RNU6-542P-201ENST00000516405 PA2G4Q9UQ80 394 aaKnown RBP-1.18□□□□□ -2.6
RNU6-542P-201ENST00000516405 MRPL11Q9Y3B7 192 aaKnown RBP-1.18□□□□□ -2.6
RNU6-542P-201ENST00000516405 AUP1Q9Y679 476 aa-1.18□□□□□ -2.6
RNU6-542P-201ENST00000516405 FRMPD3Q5JV73 1810 aa-1.18□□□□□ -2.6
RNU6-542P-201ENST00000516405 SDK1Q7Z5N4 2213 aa-1.19□□□□□ -2.6
RNU6-542P-201ENST00000516405 PCLOQ9Y6V0 5065 aa-1.19□□□□□ -2.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms