RNA–Protein interactions for RNA: ENST00000514929.1

SNF8-213, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-213ENST00000514929 KLRB1Q12918 225 aa23.46■■□□□ 1.35
SNF8-213ENST00000514929 HIF1AQ16665 826 aa23.46■■□□□ 1.35
SNF8-213ENST00000514929 WASHC2DQ5SRD0 308 aa23.46■■□□□ 1.35
SNF8-213ENST00000514929 FRMPD2BQ6IN97 320 aa23.46■■□□□ 1.35
SNF8-213ENST00000514929 LRRC8EQ6NSJ5 796 aa23.46■■□□□ 1.35
SNF8-213ENST00000514929 KIAA0408Q6ZU52 694 aa23.46■■□□□ 1.35
SNF8-213ENST00000514929 UBE2R2Q712K3 238 aaPredicted RBP23.46■■□□□ 1.35
SNF8-213ENST00000514929 PPFIBP2Q8ND30 876 aa23.46■■□□□ 1.35
SNF8-213ENST00000514929 ZNF480Q8WV37 535 aa23.46■■□□□ 1.35
SNF8-213ENST00000514929 LRRC39Q96DD0 335 aa23.46■■□□□ 1.35
SNF8-213ENST00000514929 ZNF285Q96NJ3 590 aa23.46■■□□□ 1.35
SNF8-213ENST00000514929 SLC25A23Q9BV35 468 aa23.46■■□□□ 1.35
SNF8-213ENST00000514929 SLC6A20Q9NP91 592 aa23.46■■□□□ 1.35
SNF8-213ENST00000514929 ABCF3Q9NUQ8 709 aa23.46■■□□□ 1.35
SNF8-213ENST00000514929 TAC3Q9UHF0 121 aa23.46■■□□□ 1.35
SNF8-213ENST00000514929 NRP2O60462 931 aa23.45■■□□□ 1.34
SNF8-213ENST00000514929 SEC31AO94979 1220 aaKnown RBP23.45■■□□□ 1.34
SNF8-213ENST00000514929 CCNDBP1O95273 360 aa23.45■■□□□ 1.34
SNF8-213ENST00000514929 WISP1O95388 367 aa23.45■■□□□ 1.34
SNF8-213ENST00000514929 ZIC2O95409 532 aaPredicted RBP23.45■■□□□ 1.34
SNF8-213ENST00000514929 AHSGP02765 367 aa23.45■■□□□ 1.34
SNF8-213ENST00000514929 PIM1P11309 404 aaPredicted RBP23.45■■□□□ 1.34
SNF8-213ENST00000514929 GABRB3P28472 473 aa23.45■■□□□ 1.34
SNF8-213ENST00000514929 CASRP41180 1078 aa23.45■■□□□ 1.34
SNF8-213ENST00000514929 SKIV2L2P42285 1042 aaKnown RBP23.45■■□□□ 1.34
SNF8-213ENST00000514929 RGS4P49798 205 aa23.45■■□□□ 1.34
SNF8-213ENST00000514929 RRADP55042 308 aa23.45■■□□□ 1.34
SNF8-213ENST00000514929 TLE1Q04724 770 aa23.45■■□□□ 1.34
SNF8-213ENST00000514929 ATP1A4Q13733 1029 aa23.45■■□□□ 1.34
SNF8-213ENST00000514929 SSPNQ14714 243 aa23.45■■□□□ 1.34
SNF8-213ENST00000514929 FAM214AQ32MH5 1076 aa23.45■■□□□ 1.34
SNF8-213ENST00000514929 MRPL14Q6P1L8 145 aaKnown RBP23.45■■□□□ 1.34
SNF8-213ENST00000514929 MED25Q71SY5 747 aa23.45■■□□□ 1.34
SNF8-213ENST00000514929 RNF44Q7L0R7 432 aa23.45■■□□□ 1.34
SNF8-213ENST00000514929 CNTN4Q8IWV2 1026 aa23.45■■□□□ 1.34
SNF8-213ENST00000514929 TMEM102Q8N9M5 508 aaPredicted RBP23.45■■□□□ 1.34
SNF8-213ENST00000514929 TEX19Q8NA77 164 aa23.45■■□□□ 1.34
SNF8-213ENST00000514929 OR2Y1Q8NGV0 311 aa23.45■■□□□ 1.34
SNF8-213ENST00000514929 KRT12Q99456 494 aa23.45■■□□□ 1.34
SNF8-213ENST00000514929 ZFYVE21Q9BQ24 234 aa23.45■■□□□ 1.34
SNF8-213ENST00000514929 EPN3Q9H201 632 aa23.45■■□□□ 1.34
SNF8-213ENST00000514929 OR2A25A4D2G3 310 aa23.44■■□□□ 1.34
SNF8-213ENST00000514929 EFCAB8A8MWE9 144 aa23.44■■□□□ 1.34
SNF8-213ENST00000514929 E7ENX8 843 aa23.44■■□□□ 1.34
SNF8-213ENST00000514929 FANCGO15287 622 aa23.44■■□□□ 1.34
SNF8-213ENST00000514929 EIF2S1P05198 315 aaKnown RBP23.44■■□□□ 1.34
SNF8-213ENST00000514929 PGDP52209 483 aa23.44■■□□□ 1.34
SNF8-213ENST00000514929 TAP2Q03519 686 aa23.44■■□□□ 1.34
SNF8-213ENST00000514929 RBM20Q5T481 1227 aaKnown RBP23.44■■□□□ 1.34
SNF8-213ENST00000514929 THEMIS2Q5TEJ8 643 aa23.44■■□□□ 1.34
SNF8-213ENST00000514929 ICE2Q659A1 982 aa23.44■■□□□ 1.34
SNF8-213ENST00000514929 PTERQ96BW5 349 aa23.44■■□□□ 1.34
SNF8-213ENST00000514929 IP6K3Q96PC2 410 aa23.44■■□□□ 1.34
SNF8-213ENST00000514929 ENAMQ9NRM1 1142 aa23.44■■□□□ 1.34
SNF8-213ENST00000514929 SLC22A11Q9NSA0 550 aa23.44■■□□□ 1.34
SNF8-213ENST00000514929 UTP6Q9NYH9 597 aaKnown RBP23.44■■□□□ 1.34
SNF8-213ENST00000514929 ANKMY1Q9P2S6 941 aa23.44■■□□□ 1.34
SNF8-213ENST00000514929 SLC17A6Q9P2U8 582 aa23.44■■□□□ 1.34
SNF8-213ENST00000514929 G3BP2Q9UN86 482 aaKnown RBP23.44■■□□□ 1.34
SNF8-213ENST00000514929 PCDHGA9Q9Y5G4 932 aaKnown RBP23.44■■□□□ 1.34
SNF8-213ENST00000514929 TEX264Q9Y6I9 313 aa23.44■■□□□ 1.34
SNF8-213ENST00000514929 LOC105369274A0A096LPK9 316 aa23.43■■□□□ 1.34
SNF8-213ENST00000514929 LOC102723532A0A0G2JNH3 316 aa23.43■■□□□ 1.34
SNF8-213ENST00000514929 HYKKA2RU49 373 aa23.43■■□□□ 1.34
SNF8-213ENST00000514929 FITM1A5D6W6 292 aa23.43■■□□□ 1.34
SNF8-213ENST00000514929 CNOT3O75175 753 aaKnown RBP23.43■■□□□ 1.34
SNF8-213ENST00000514929 KCNC4Q03721 635 aa23.43■■□□□ 1.34
SNF8-213ENST00000514929 PRDX1Q06830 199 aaKnown RBP23.43■■□□□ 1.34
SNF8-213ENST00000514929 COLEC12Q5KU26 742 aa23.43■■□□□ 1.34
SNF8-213ENST00000514929 TEDDM1Q5T9Z0 273 aa23.43■■□□□ 1.34
SNF8-213ENST00000514929 MRGPREQ86SM8 312 aa23.43■■□□□ 1.34
SNF8-213ENST00000514929 PALM2Q8IXS6 379 aa23.43■■□□□ 1.34
SNF8-213ENST00000514929 OR4N4Q8N0Y3 316 aa23.43■■□□□ 1.34
SNF8-213ENST00000514929 EEF1AKMT1Q8WVE0 214 aa23.43■■□□□ 1.34
SNF8-213ENST00000514929 FKBP10Q96AY3 582 aa23.43■■□□□ 1.34
SNF8-213ENST00000514929 PLCD4Q9BRC7 762 aa23.43■■□□□ 1.34
SNF8-213ENST00000514929 PLAC1Q9HBJ0 212 aa23.43■■□□□ 1.34
SNF8-213ENST00000514929 TENM4Q6N022 2769 aa23.42■■□□□ 1.34
SNF8-213ENST00000514929 PEX12O00623 359 aa23.42■■□□□ 1.34
SNF8-213ENST00000514929 PDGFAP04085 211 aa23.42■■□□□ 1.34
SNF8-213ENST00000514929 ITGAXP20702 1163 aa23.42■■□□□ 1.34
SNF8-213ENST00000514929 CSRP3P50461 194 aa23.42■■□□□ 1.34
SNF8-213ENST00000514929 CDKN2DP55273 166 aa23.42■■□□□ 1.34
SNF8-213ENST00000514929 FOXL2P58012 376 aa23.42■■□□□ 1.34
SNF8-213ENST00000514929 TIAL1Q01085 375 aaKnown RBP eCLIP23.42■■□□□ 1.34
SNF8-213ENST00000514929 FBXO42Q6P3S6 717 aa23.42■■□□□ 1.34
SNF8-213ENST00000514929 TRMT10BQ6PF06 316 aaKnown RBP23.42■■□□□ 1.34
SNF8-213ENST00000514929 PAQR3Q6TCH7 311 aa23.42■■□□□ 1.34
SNF8-213ENST00000514929 OVCH1Q7RTY7 1134 aa23.42■■□□□ 1.34
SNF8-213ENST00000514929 GALNT7Q86SF2 657 aa23.42■■□□□ 1.34
SNF8-213ENST00000514929 ANKMY2Q8IV38 441 aa23.42■■□□□ 1.34
SNF8-213ENST00000514929 MYO1HQ8N1T3 1032 aa23.42■■□□□ 1.34
SNF8-213ENST00000514929 METTL27Q8N6F8 245 aaPredicted RBP23.42■■□□□ 1.34
SNF8-213ENST00000514929 MCOLN3Q8TDD5 553 aa23.42■■□□□ 1.34
SNF8-213ENST00000514929 WDR83Q9BRX9 315 aaKnown RBP23.42■■□□□ 1.34
SNF8-213ENST00000514929 SNX24Q9Y343 169 aa23.42■■□□□ 1.34
SNF8-213ENST00000514929 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP23.42■■□□□ 1.34
SNF8-213ENST00000514929 A6NL46 340 aa23.41■■□□□ 1.34
SNF8-213ENST00000514929 NDC80O14777 642 aa23.41■■□□□ 1.34
SNF8-213ENST00000514929 ALBP02768 609 aa23.41■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms