RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 GFERP55789 205 aa8.05□□□□□ -1.12
CCL28-204ENST00000514421 TAS2R39P59534 338 aa8.05□□□□□ -1.12
CCL28-204ENST00000514421 DNAJB13P59910 316 aa8.05□□□□□ -1.12
CCL28-204ENST00000514421 IRF9Q00978 393 aa8.05□□□□□ -1.12
CCL28-204ENST00000514421 MC2RQ01718 297 aa8.05□□□□□ -1.12
CCL28-204ENST00000514421 USP10Q14694 798 aaKnown RBP8.05□□□□□ -1.12
CCL28-204ENST00000514421 TBC1D25Q3MII6 688 aa8.05□□□□□ -1.12
CCL28-204ENST00000514421 TAF1BQ53T94 588 aaPredicted RBP8.05□□□□□ -1.12
CCL28-204ENST00000514421 ACSBG2Q5FVE4 666 aa8.05□□□□□ -1.12
CCL28-204ENST00000514421 C16orf46Q6P387 395 aa8.05□□□□□ -1.12
CCL28-204ENST00000514421 CYHR1Q6ZMK1 362 aa8.05□□□□□ -1.12
CCL28-204ENST00000514421 FAM92BQ6ZTR7 304 aa8.05□□□□□ -1.12
CCL28-204ENST00000514421 PRSS42Q7Z5A4 293 aa8.05□□□□□ -1.12
CCL28-204ENST00000514421 C10orf107Q8IVU9 208 aa8.05□□□□□ -1.12
CCL28-204ENST00000514421 CEP97Q8IW35 865 aa8.05□□□□□ -1.12
CCL28-204ENST00000514421 DCUN1D3Q8IWE4 304 aa8.05□□□□□ -1.12
CCL28-204ENST00000514421 ADGRF3Q8IZF5 1079 aa8.05□□□□□ -1.12
CCL28-204ENST00000514421 CARFQ8N187 725 aa8.05□□□□□ -1.12
CCL28-204ENST00000514421 SIDT2Q8NBJ9 832 aaKnown RBP8.05□□□□□ -1.12
CCL28-204ENST00000514421 RFWD2Q8NHY2 731 aa8.05□□□□□ -1.12
CCL28-204ENST00000514421 ZCCHC14Q8WYQ9 949 aaKnown RBP8.05□□□□□ -1.12
CCL28-204ENST00000514421 KLHL6Q8WZ60 621 aa8.05□□□□□ -1.12
CCL28-204ENST00000514421 USP7Q93009 1102 aa8.05□□□□□ -1.12
CCL28-204ENST00000514421 TSPAN17Q96FV3 270 aa8.05□□□□□ -1.12
CCL28-204ENST00000514421 TAAR9Q96RI9 348 aa8.05□□□□□ -1.12
CCL28-204ENST00000514421 SORT1Q99523 831 aa8.05□□□□□ -1.12
CCL28-204ENST00000514421 GPR21Q99679 349 aa8.05□□□□□ -1.12
CCL28-204ENST00000514421 HGH1Q9BTY7 390 aa8.05□□□□□ -1.12
CCL28-204ENST00000514421 ASPSCR1Q9BZE9 553 aa8.05□□□□□ -1.12
CCL28-204ENST00000514421 XKR8Q9H6D3 395 aa8.05□□□□□ -1.12
CCL28-204ENST00000514421 NPHS2Q9NP85 383 aa8.05□□□□□ -1.12
CCL28-204ENST00000514421 FBXO8Q9NRD0 319 aa8.05□□□□□ -1.12
CCL28-204ENST00000514421 THSD1Q9NS62 852 aa8.05□□□□□ -1.12
CCL28-204ENST00000514421 OCIAD1Q9NX40 245 aa8.05□□□□□ -1.12
CCL28-204ENST00000514421 SLC39A1Q9NY26 324 aa8.05□□□□□ -1.12
CCL28-204ENST00000514421 TAS2R13Q9NYV9 303 aa8.05□□□□□ -1.12
CCL28-204ENST00000514421 TLK1Q9UKI8 766 aa8.05□□□□□ -1.12
CCL28-204ENST00000514421 SLC39A10Q9ULF5 831 aa8.05□□□□□ -1.12
CCL28-204ENST00000514421 MED16Q9Y2X0 877 aa8.05□□□□□ -1.12
CCL28-204ENST00000514421 PCDHGA7Q9Y5G6 932 aa8.05□□□□□ -1.12
CCL28-204ENST00000514421 KIF26BQ2KJY2 2108 aa8.05□□□□□ -1.12
CCL28-204ENST00000514421 AKAP13Q12802 2813 aa8.04□□□□□ -1.12
CCL28-204ENST00000514421 MAP1BP46821 2468 aaKnown RBP8.04□□□□□ -1.12
CCL28-204ENST00000514421 PMS2P1A4D2B8 440 aa8.04□□□□□ -1.12
CCL28-204ENST00000514421 CDRT15L2A8MXV6 281 aa8.04□□□□□ -1.12
CCL28-204ENST00000514421 C2orf74A8MZ97 194 aa8.04□□□□□ -1.12
CCL28-204ENST00000514421 AGRPO00253 132 aa8.04□□□□□ -1.12
CCL28-204ENST00000514421 BTN3A1O00481 513 aa8.04□□□□□ -1.12
CCL28-204ENST00000514421 ZNF195O14628 629 aa8.04□□□□□ -1.12
CCL28-204ENST00000514421 ZBTB14O43829 449 aa8.04□□□□□ -1.12
CCL28-204ENST00000514421 TRIM13O60858 407 aa8.04□□□□□ -1.12
CCL28-204ENST00000514421 RASSF9O75901 435 aa8.04□□□□□ -1.12
CCL28-204ENST00000514421 C1orf105O95561 183 aa8.04□□□□□ -1.12
CCL28-204ENST00000514421 T-ENOLP0DO92 83 aa8.04□□□□□ -1.12
CCL28-204ENST00000514421 NELFEP18615 380 aaKnown RBP8.04□□□□□ -1.12
CCL28-204ENST00000514421 ITIH1P19827 911 aa8.04□□□□□ -1.12
CCL28-204ENST00000514421 FDXRP22570 491 aa8.04□□□□□ -1.12
CCL28-204ENST00000514421 PRDX3P30048 256 aaKnown RBP8.04□□□□□ -1.12
CCL28-204ENST00000514421 SLC5A2P31639 672 aa8.04□□□□□ -1.12
CCL28-204ENST00000514421 ARRB2P32121 409 aa8.04□□□□□ -1.12
CCL28-204ENST00000514421 ETV5P41161 510 aa8.04□□□□□ -1.12
CCL28-204ENST00000514421 SLC1A6P48664 564 aa8.04□□□□□ -1.12
CCL28-204ENST00000514421 ARL4DP49703 201 aa8.04□□□□□ -1.12
CCL28-204ENST00000514421 RGS4P49798 205 aa8.04□□□□□ -1.12
CCL28-204ENST00000514421 SEPHS1P49903 392 aa8.04□□□□□ -1.12
CCL28-204ENST00000514421 RAB28P51157 221 aa8.04□□□□□ -1.12
CCL28-204ENST00000514421 KPNA2P52292 529 aaKnown RBP8.04□□□□□ -1.12
CCL28-204ENST00000514421 ABCE1P61221 599 aaKnown RBP8.04□□□□□ -1.12
CCL28-204ENST00000514421 NCALDP61601 193 aa8.04□□□□□ -1.12
CCL28-204ENST00000514421 TIAL1Q01085 375 aaKnown RBP eCLIP8.04□□□□□ -1.12
CCL28-204ENST00000514421 DLG1Q12959 904 aa8.04□□□□□ -1.12
CCL28-204ENST00000514421 GRB7Q14451 532 aa8.04□□□□□ -1.12
CCL28-204ENST00000514421 KRT72Q14CN4 511 aa8.04□□□□□ -1.12
CCL28-204ENST00000514421 SETDB1Q15047 1291 aa8.04□□□□□ -1.12
CCL28-204ENST00000514421 HECTD2Q5U5R9 776 aa8.04□□□□□ -1.12
CCL28-204ENST00000514421 LIPMQ5VYY2 423 aa8.04□□□□□ -1.12
CCL28-204ENST00000514421 LRRC8EQ6NSJ5 796 aa8.04□□□□□ -1.12
CCL28-204ENST00000514421 FAM45BPQ6NSW5 357 aa8.04□□□□□ -1.12
CCL28-204ENST00000514421 ATG14Q6ZNE5 492 aa8.04□□□□□ -1.12
CCL28-204ENST00000514421 CLNKQ7Z7G1 428 aa8.04□□□□□ -1.12
CCL28-204ENST00000514421 BPHLQ86WA6 291 aaPredicted RBP8.04□□□□□ -1.12
CCL28-204ENST00000514421 PROSER1Q86XN7 944 aa8.04□□□□□ -1.12
CCL28-204ENST00000514421 KMT5CQ86Y97 462 aa8.04□□□□□ -1.12
CCL28-204ENST00000514421 CRLF3Q8IUI8 442 aa8.04□□□□□ -1.12
CCL28-204ENST00000514421 RAB42Q8N4Z0 105 aa8.04□□□□□ -1.12
CCL28-204ENST00000514421 GPATCH11Q8N954 259 aa8.04□□□□□ -1.12
CCL28-204ENST00000514421 PIWIL2Q8TC59 973 aaKnown RBP8.04□□□□□ -1.12
CCL28-204ENST00000514421 FAM45AQ8TCE6 357 aa8.04□□□□□ -1.12
CCL28-204ENST00000514421 SLC22A18Q96BI1 424 aa8.04□□□□□ -1.12
CCL28-204ENST00000514421 TMEM237Q96Q45 408 aa8.04□□□□□ -1.12
CCL28-204ENST00000514421 NDNQ99608 321 aa8.04□□□□□ -1.12
CCL28-204ENST00000514421 SLC30A3Q99726 388 aa8.04□□□□□ -1.12
CCL28-204ENST00000514421 MAP3K3Q99759 626 aa8.04□□□□□ -1.12
CCL28-204ENST00000514421 MRPL57Q9BQC6 102 aaKnown RBP8.04□□□□□ -1.12
CCL28-204ENST00000514421 ZPBPQ9BS86 351 aa8.04□□□□□ -1.12
CCL28-204ENST00000514421 TUBB6Q9BUF5 446 aa8.04□□□□□ -1.12
CCL28-204ENST00000514421 ZNF768Q9H5H4 540 aaKnown RBP8.04□□□□□ -1.12
CCL28-204ENST00000514421 ASCL3Q9NQ33 180 aa8.04□□□□□ -1.12
CCL28-204ENST00000514421 C1GALT1Q9NS00 363 aa8.04□□□□□ -1.12
CCL28-204ENST00000514421 IGSF5Q9NSI5 407 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms