RNA–Protein interactions for RNA: ENST00000514305.5

USP53-208, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 2

Gene USP53, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-208ENST00000514305 ZSCAN1Q8NBB4 408 aa19.47■□□□□ 0.71
USP53-208ENST00000514305 RCBTB1Q8NDN9 531 aa19.47■□□□□ 0.71
USP53-208ENST00000514305 HMGCLL1Q8TB92 370 aa19.47■□□□□ 0.71
USP53-208ENST00000514305 MZB1Q8WU39 189 aa19.47■□□□□ 0.71
USP53-208ENST00000514305 SMPDL3AQ92484 453 aa19.47■□□□□ 0.71
USP53-208ENST00000514305 MED8Q96G25 268 aa19.47■□□□□ 0.71
USP53-208ENST00000514305 CCDC74BQ96LY2 380 aa19.47■□□□□ 0.71
USP53-208ENST00000514305 PKP4Q99569 1192 aa19.47■□□□□ 0.71
USP53-208ENST00000514305 MRPL57Q9BQC6 102 aaKnown RBP19.47■□□□□ 0.71
USP53-208ENST00000514305 B3GNT4Q9C0J1 378 aa19.47■□□□□ 0.71
USP53-208ENST00000514305 PCBD2Q9H0N5 130 aa19.47■□□□□ 0.71
USP53-208ENST00000514305 ALG9Q9H6U8 611 aa19.47■□□□□ 0.71
USP53-208ENST00000514305 CNOT10Q9H9A5 744 aaKnown RBP19.47■□□□□ 0.71
USP53-208ENST00000514305 IGSF5Q9NSI5 407 aa19.47■□□□□ 0.71
USP53-208ENST00000514305 MID2Q9UJV3 735 aa19.47■□□□□ 0.71
USP53-208ENST00000514305 ADAMTS6Q9UKP5 1117 aa19.47■□□□□ 0.71
USP53-208ENST00000514305 AHCTF1Q8WYP5 2266 aa19.47■□□□□ 0.71
USP53-208ENST00000514305 HELZ2Q9BYK8 2649 aaKnown RBP19.47■□□□□ 0.71
USP53-208ENST00000514305 IGHV5-10-1A0A0J9YXX1 117 aa19.46■□□□□ 0.71
USP53-208ENST00000514305 TPBGLP0DKB5 382 aa19.46■□□□□ 0.71
USP53-208ENST00000514305 TAC1P20366 129 aa19.46■□□□□ 0.71
USP53-208ENST00000514305 CD1CP29017 333 aa19.46■□□□□ 0.71
USP53-208ENST00000514305 PNLIPRP1P54315 467 aa19.46■□□□□ 0.71
USP53-208ENST00000514305 TRA2AQ13595 282 aaKnown RBP eCLIP19.46■□□□□ 0.71
USP53-208ENST00000514305 TGFBIQ15582 683 aa19.46■□□□□ 0.71
USP53-208ENST00000514305 CYP2A13Q16696 494 aa19.46■□□□□ 0.71
USP53-208ENST00000514305 CCDC153Q494R4 210 aa19.46■□□□□ 0.71
USP53-208ENST00000514305 EEF1AKMT2Q5JPI9 291 aaKnown RBP19.46■□□□□ 0.71
USP53-208ENST00000514305 TMEM71Q6P5X7 295 aa19.46■□□□□ 0.71
USP53-208ENST00000514305 SBSNQ6UWP8 590 aa19.46■□□□□ 0.71
USP53-208ENST00000514305 ISCA2Q86U28 154 aa19.46■□□□□ 0.71
USP53-208ENST00000514305 TRABD2AQ86V40 505 aa19.46■□□□□ 0.71
USP53-208ENST00000514305 ZFAND4Q86XD8 727 aa19.46■□□□□ 0.71
USP53-208ENST00000514305 CYP4X1Q8N118 509 aa19.46■□□□□ 0.71
USP53-208ENST00000514305 SPATA6LQ8N4H0 392 aa19.46■□□□□ 0.71
USP53-208ENST00000514305 OR4D9Q8NGE8 314 aa19.46■□□□□ 0.71
USP53-208ENST00000514305 MRPL46Q9H2W6 279 aaKnown RBP19.46■□□□□ 0.71
USP53-208ENST00000514305 NUDT4Q9NZJ9 180 aa19.46■□□□□ 0.71
USP53-208ENST00000514305 CD274Q9NZQ7 290 aa19.46■□□□□ 0.71
USP53-208ENST00000514305 FOXJ2Q9P0K8 574 aa19.46■□□□□ 0.71
USP53-208ENST00000514305 ICKQ9UPZ9 632 aa19.46■□□□□ 0.71
USP53-208ENST00000514305 ACTL7BQ9Y614 415 aa19.46■□□□□ 0.71
USP53-208ENST00000514305 CFAP46Q8IYW2 2715 aa19.45■□□□□ 0.7
USP53-208ENST00000514305 A0A1W2PPM1 405 aa19.45■□□□□ 0.7
USP53-208ENST00000514305 GSAPA4D1B5 854 aa19.45■□□□□ 0.7
USP53-208ENST00000514305 ISM1B1AKI9 464 aa19.45■□□□□ 0.7
USP53-208ENST00000514305 C9orf172C9J069 976 aa19.45■□□□□ 0.7
USP53-208ENST00000514305 EFSO43281 561 aa19.45■□□□□ 0.7
USP53-208ENST00000514305 SMIM24O75264 130 aa19.45■□□□□ 0.7
USP53-208ENST00000514305 IPO13O94829 963 aaKnown RBP19.45■□□□□ 0.7
USP53-208ENST00000514305 CCNDBP1O95273 360 aa19.45■□□□□ 0.7
USP53-208ENST00000514305 GUCA1CO95843 209 aa19.45■□□□□ 0.7
USP53-208ENST00000514305 POLR2CP19387 275 aaPredicted RBP19.45■□□□□ 0.7
USP53-208ENST00000514305 CSTF2P33240 577 aaKnown RBP eCLIP19.45■□□□□ 0.7
USP53-208ENST00000514305 IRF9Q00978 393 aa19.45■□□□□ 0.7
USP53-208ENST00000514305 SLC18A2Q05940 514 aa19.45■□□□□ 0.7
USP53-208ENST00000514305 SULT1C3Q6IMI6 304 aa19.45■□□□□ 0.7
USP53-208ENST00000514305 ZNF574Q6ZN55 896 aaPredicted RBP19.45■□□□□ 0.7
USP53-208ENST00000514305 SRRM1Q8IYB3 904 aaKnown RBP19.45■□□□□ 0.7
USP53-208ENST00000514305 FBXL8Q96CD0 374 aa19.45■□□□□ 0.7
USP53-208ENST00000514305 ARHGAP9Q9BRR9 750 aa19.45■□□□□ 0.7
USP53-208ENST00000514305 SEMA4CQ9C0C4 833 aa19.45■□□□□ 0.7
USP53-208ENST00000514305 INTS7Q9NVH2 962 aaKnown RBP19.45■□□□□ 0.7
USP53-208ENST00000514305 UTP6Q9NYH9 597 aaKnown RBP19.45■□□□□ 0.7
USP53-208ENST00000514305 SUPT3HB4E1H0 165 aa19.44■□□□□ 0.7
USP53-208ENST00000514305 STMND1H3BQB6 276 aa19.44■□□□□ 0.7
USP53-208ENST00000514305 GOLGA8RI6L899 631 aa19.44■□□□□ 0.7
USP53-208ENST00000514305 TOX3O15405 576 aaPredicted RBP19.44■□□□□ 0.7
USP53-208ENST00000514305 CAPN5O15484 640 aaPredicted RBP19.44■□□□□ 0.7
USP53-208ENST00000514305 SUPT3HO75486 399 aa19.44■□□□□ 0.7
USP53-208ENST00000514305 SLC16A8O95907 504 aa19.44■□□□□ 0.7
USP53-208ENST00000514305 CHRM5P08912 532 aaPredicted RBP19.44■□□□□ 0.7
USP53-208ENST00000514305 ERGP11308 486 aa19.44■□□□□ 0.7
USP53-208ENST00000514305 CCL4P13236 92 aa19.44■□□□□ 0.7
USP53-208ENST00000514305 OAS2P29728 719 aaKnown RBP19.44■□□□□ 0.7
USP53-208ENST00000514305 CRHR1P34998 444 aa19.44■□□□□ 0.7
USP53-208ENST00000514305 RPA3P35244 121 aaPredicted RBP19.44■□□□□ 0.7
USP53-208ENST00000514305 GLRBP48167 497 aa19.44■□□□□ 0.7
USP53-208ENST00000514305 PHKG1Q16816 387 aa19.44■□□□□ 0.7
USP53-208ENST00000514305 PPP1R3AQ16821 1122 aa19.44■□□□□ 0.7
USP53-208ENST00000514305 NKAIN2Q5VXU1 208 aa19.44■□□□□ 0.7
USP53-208ENST00000514305 CAPN13Q6MZZ7 669 aaPredicted RBP19.44■□□□□ 0.7
USP53-208ENST00000514305 IRGCQ6NXR0 463 aa19.44■□□□□ 0.7
USP53-208ENST00000514305 AGTRAPQ6RW13 159 aa19.44■□□□□ 0.7
USP53-208ENST00000514305 AGBL5Q8NDL9 886 aa19.44■□□□□ 0.7
USP53-208ENST00000514305 TAAR9Q96RI9 348 aa19.44■□□□□ 0.7
USP53-208ENST00000514305 XKR8Q9H6D3 395 aa19.44■□□□□ 0.7
USP53-208ENST00000514305 CCDC177Q9NQR7 707 aaPredicted RBP19.44■□□□□ 0.7
USP53-208ENST00000514305 MKS1Q9NXB0 559 aa19.44■□□□□ 0.7
USP53-208ENST00000514305 STOX2Q9P2F5 926 aaPredicted RBP19.44■□□□□ 0.7
USP53-208ENST00000514305 PLAGL1Q9UM63 463 aa19.44■□□□□ 0.7
USP53-208ENST00000514305 TNPO3Q9Y5L0 923 aaKnown RBP19.44■□□□□ 0.7
USP53-208ENST00000514305 ZNF462Q96JM2 2506 aa19.44■□□□□ 0.7
USP53-208ENST00000514305 SDK2Q58EX2 2172 aa19.43■□□□□ 0.7
USP53-208ENST00000514305 B8ZZF3 427 aa19.43■□□□□ 0.7
USP53-208ENST00000514305 IQCJ-SCHIP1C9J366 451 aaPredicted RBP19.43■□□□□ 0.7
USP53-208ENST00000514305 GFAPP14136 432 aa19.43■□□□□ 0.7
USP53-208ENST00000514305 DLG1Q12959 904 aa19.43■□□□□ 0.7
USP53-208ENST00000514305 SRSF6Q13247 344 aaKnown RBP19.43■□□□□ 0.7
USP53-208ENST00000514305 GRB7Q14451 532 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms