RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 ANAPC5Q9UJX4 755 aa4.03□□□□□ -1.76
HTT-210ENST00000512909 RALYQ9UKM9 306 aaKnown RBP4.03□□□□□ -1.76
HTT-210ENST00000512909 PADI3Q9ULW8 664 aa4.03□□□□□ -1.76
HTT-210ENST00000512909 FAF1Q9UNN5 650 aaPredicted RBP4.03□□□□□ -1.76
HTT-210ENST00000512909 RIPK3Q9Y572 518 aa4.03□□□□□ -1.76
HTT-210ENST00000512909 A0A1B0GUL6 1792 aa4.03□□□□□ -1.76
HTT-210ENST00000512909 IGKV6D-41A0A0C4DH26 115 aa4.02□□□□□ -1.77
HTT-210ENST00000512909 EDDM13A0A1B0GTR0 161 aa4.02□□□□□ -1.77
HTT-210ENST00000512909 ELOVL7A1L3X0 281 aa4.02□□□□□ -1.77
HTT-210ENST00000512909 ASPDHA6ND91 283 aa4.02□□□□□ -1.77
HTT-210ENST00000512909 CCDC69A6NI79 296 aa4.02□□□□□ -1.77
HTT-210ENST00000512909 SNRNP70P08621 437 aaKnown RBP4.02□□□□□ -1.77
HTT-210ENST00000512909 IL11P20809 199 aa4.02□□□□□ -1.77
HTT-210ENST00000512909 DNASE1P24855 282 aa4.02□□□□□ -1.77
HTT-210ENST00000512909 TNFRSF8P28908 595 aa4.02□□□□□ -1.77
HTT-210ENST00000512909 GABRA5P31644 462 aa4.02□□□□□ -1.77
HTT-210ENST00000512909 AHRP35869 848 aa4.02□□□□□ -1.77
HTT-210ENST00000512909 MTHFRP42898 656 aa4.02□□□□□ -1.77
HTT-210ENST00000512909 HOXA1P49639 335 aaPredicted RBP4.02□□□□□ -1.77
HTT-210ENST00000512909 RAB28P51157 221 aa4.02□□□□□ -1.77
HTT-210ENST00000512909 CDK3Q00526 305 aa4.02□□□□□ -1.77
HTT-210ENST00000512909 TROAPQ12815 778 aa4.02□□□□□ -1.77
HTT-210ENST00000512909 ZBTB17Q13105 803 aa4.02□□□□□ -1.77
HTT-210ENST00000512909 KEAP1Q14145 624 aa4.02□□□□□ -1.77
HTT-210ENST00000512909 GRB14Q14449 540 aa4.02□□□□□ -1.77
HTT-210ENST00000512909 MELKQ14680 651 aa4.02□□□□□ -1.77
HTT-210ENST00000512909 DUOXA1Q1HG43 343 aa4.02□□□□□ -1.77
HTT-210ENST00000512909 ACCSLQ4AC99 568 aa4.02□□□□□ -1.77
HTT-210ENST00000512909 CBWD6Q4V339 395 aa4.02□□□□□ -1.77
HTT-210ENST00000512909 CBWD3Q5JTY5 395 aa4.02□□□□□ -1.77
HTT-210ENST00000512909 ARMC4Q5T2S8 1044 aa4.02□□□□□ -1.77
HTT-210ENST00000512909 LCN10Q6JVE6 187 aa4.02□□□□□ -1.77
HTT-210ENST00000512909 GDPD4Q6W3E5 623 aa4.02□□□□□ -1.77
HTT-210ENST00000512909 ASB18Q6ZVZ8 466 aa4.02□□□□□ -1.77
HTT-210ENST00000512909 DET1Q7L5Y6 550 aa4.02□□□□□ -1.77
HTT-210ENST00000512909 TBC1D10CQ8IV04 446 aa4.02□□□□□ -1.77
HTT-210ENST00000512909 CEP97Q8IW35 865 aa4.02□□□□□ -1.77
HTT-210ENST00000512909 DCP1BQ8IZD4 617 aaKnown RBP4.02□□□□□ -1.77
HTT-210ENST00000512909 C1orf87Q8N0U7 546 aa4.02□□□□□ -1.77
HTT-210ENST00000512909 TC2NQ8N9U0 490 aa4.02□□□□□ -1.77
HTT-210ENST00000512909 PAPD5Q8NDF8 572 aaKnown RBP4.02□□□□□ -1.77
HTT-210ENST00000512909 GMCL1P1Q8NEA9 526 aa4.02□□□□□ -1.77
HTT-210ENST00000512909 TRPV1Q8NER1 839 aa4.02□□□□□ -1.77
HTT-210ENST00000512909 NCOA7Q8NI08 942 aa4.02□□□□□ -1.77
HTT-210ENST00000512909 WDR20Q8TBZ3 569 aa4.02□□□□□ -1.77
HTT-210ENST00000512909 SLAMF9Q96A28 289 aa4.02□□□□□ -1.77
HTT-210ENST00000512909 NSL1Q96IY1 281 aa4.02□□□□□ -1.77
HTT-210ENST00000512909 SFXN2Q96NB2 322 aa4.02□□□□□ -1.77
HTT-210ENST00000512909 ZNF583Q96ND8 569 aa4.02□□□□□ -1.77
HTT-210ENST00000512909 OR6C1Q96RD1 312 aa4.02□□□□□ -1.77
HTT-210ENST00000512909 PCYT2Q99447 389 aa4.02□□□□□ -1.77
HTT-210ENST00000512909 LRRC1Q9BTT6 524 aa4.02□□□□□ -1.77
HTT-210ENST00000512909 CPVLQ9H3G5 476 aa4.02□□□□□ -1.77
HTT-210ENST00000512909 GOLPH3LQ9H4A5 285 aa4.02□□□□□ -1.77
HTT-210ENST00000512909 TMEM30AQ9NV96 361 aa4.02□□□□□ -1.77
HTT-210ENST00000512909 SLC38A7Q9NVC3 462 aa4.02□□□□□ -1.77
HTT-210ENST00000512909 WWOXQ9NZC7 414 aa4.02□□□□□ -1.77
HTT-210ENST00000512909 IL17BQ9UHF5 180 aa4.02□□□□□ -1.77
HTT-210ENST00000512909 NRBP1Q9UHY1 535 aa4.02□□□□□ -1.77
HTT-210ENST00000512909 JRKLQ9Y4A0 524 aa4.02□□□□□ -1.77
HTT-210ENST00000512909 THSD7BQ9C0I4 1608 aa4.02□□□□□ -1.77
HTT-210ENST00000512909 ZNF646O15015 1829 aaPredicted RBP4.02□□□□□ -1.77
HTT-210ENST00000512909 CACNA1IQ9P0X4 2223 aa4.02□□□□□ -1.77
HTT-210ENST00000512909 ARAP2Q8WZ64 1704 aa4.01□□□□□ -1.77
HTT-210ENST00000512909 ECM29Q5VYK3 1845 aa4.01□□□□□ -1.77
HTT-210ENST00000512909 A0A0B4J293 547 aa4.01□□□□□ -1.77
HTT-210ENST00000512909 ASB14A6NK59 587 aa4.01□□□□□ -1.77
HTT-210ENST00000512909 C4orf47A7E2U8 309 aa4.01□□□□□ -1.77
HTT-210ENST00000512909 E7EWF7 191 aa4.01□□□□□ -1.77
HTT-210ENST00000512909 CAPN9O14815 690 aa4.01□□□□□ -1.77
HTT-210ENST00000512909 CLIC2O15247 247 aa4.01□□□□□ -1.77
HTT-210ENST00000512909 XRCC3O43542 346 aa4.01□□□□□ -1.77
HTT-210ENST00000512909 BUB3O43684 328 aa4.01□□□□□ -1.77
HTT-210ENST00000512909 SLC28A2O43868 658 aa4.01□□□□□ -1.77
HTT-210ENST00000512909 PDE9AO76083 593 aa4.01□□□□□ -1.77
HTT-210ENST00000512909 PGM3O95394 542 aa4.01□□□□□ -1.77
HTT-210ENST00000512909 LDLRP01130 860 aa4.01□□□□□ -1.77
HTT-210ENST00000512909 TFAP2AP05549 437 aa4.01□□□□□ -1.77
HTT-210ENST00000512909 FYNP06241 537 aa4.01□□□□□ -1.77
HTT-210ENST00000512909 LIPFP07098 398 aa4.01□□□□□ -1.77
HTT-210ENST00000512909 CCDC175P0C221 793 aa4.01□□□□□ -1.77
HTT-210ENST00000512909 ITGA2P17301 1181 aa4.01□□□□□ -1.77
HTT-210ENST00000512909 CKMT2P17540 419 aa4.01□□□□□ -1.77
HTT-210ENST00000512909 CAPN2P17655 700 aa4.01□□□□□ -1.77
HTT-210ENST00000512909 AMD1P17707 334 aa4.01□□□□□ -1.77
HTT-210ENST00000512909 DGKAP23743 735 aa4.01□□□□□ -1.77
HTT-210ENST00000512909 CPT2P23786 658 aa4.01□□□□□ -1.77
HTT-210ENST00000512909 CCKARP32238 428 aa4.01□□□□□ -1.77
HTT-210ENST00000512909 PDLIM4P50479 330 aa4.01□□□□□ -1.77
HTT-210ENST00000512909 CCR3P51677 355 aa4.01□□□□□ -1.77
HTT-210ENST00000512909 GAS1P54826 345 aa4.01□□□□□ -1.77
HTT-210ENST00000512909 BEX3Q00994 111 aa4.01□□□□□ -1.77
HTT-210ENST00000512909 KIF5AQ12840 1032 aa4.01□□□□□ -1.77
HTT-210ENST00000512909 RALGDSQ12967 914 aa4.01□□□□□ -1.77
HTT-210ENST00000512909 COASYQ13057 564 aa4.01□□□□□ -1.77
HTT-210ENST00000512909 LRRC26Q2I0M4 334 aa4.01□□□□□ -1.77
HTT-210ENST00000512909 SIRPB2Q5JXA9 342 aa4.01□□□□□ -1.77
HTT-210ENST00000512909 ARHGEF16Q5VV41 709 aa4.01□□□□□ -1.77
HTT-210ENST00000512909 CST9LP1Q5W188 147 aa4.01□□□□□ -1.77
HTT-210ENST00000512909 ZNF517Q6ZMY9 492 aaPredicted RBP4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms