RNA–Protein interactions for RNA: ENST00000512844.5

CHD1-209, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 848 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-209ENST00000512844 AGAP3Q96P47 875 aa4.7□□□□□ -1.66
CHD1-209ENST00000512844 USP28Q96RU2 1077 aa4.7□□□□□ -1.66
CHD1-209ENST00000512844 CPNE1Q99829 537 aa4.7□□□□□ -1.66
CHD1-209ENST00000512844 PPP1R3CQ9UQK1 317 aa4.7□□□□□ -1.66
CHD1-209ENST00000512844 PRSS21Q9Y6M0 314 aa4.7□□□□□ -1.66
CHD1-209ENST00000512844 A0A0J9YWU9 116 aa4.69□□□□□ -1.66
CHD1-209ENST00000512844 MAGEC1O60732 1142 aa4.69□□□□□ -1.66
CHD1-209ENST00000512844 ACSL3O95573 720 aa4.69□□□□□ -1.66
CHD1-209ENST00000512844 ADRB2P07550 413 aa4.69□□□□□ -1.66
CHD1-209ENST00000512844 SLC2A2P11168 524 aaPredicted RBP4.69□□□□□ -1.66
CHD1-209ENST00000512844 DPEP1P16444 411 aa4.69□□□□□ -1.66
CHD1-209ENST00000512844 NKX2-1P43699 371 aaPredicted RBP4.69□□□□□ -1.66
CHD1-209ENST00000512844 FAM133BQ5BKY9 247 aaKnown RBP4.69□□□□□ -1.66
CHD1-209ENST00000512844 SLC25A53Q5H9E4 307 aa4.69□□□□□ -1.66
CHD1-209ENST00000512844 CHST3Q7LGC8 479 aa4.69□□□□□ -1.66
CHD1-209ENST00000512844 PTAR1Q7Z6K3 402 aaPredicted RBP4.69□□□□□ -1.66
CHD1-209ENST00000512844 TLK2Q86UE8 772 aa4.69□□□□□ -1.66
CHD1-209ENST00000512844 XXYLT1Q8NBI6 393 aa4.69□□□□□ -1.66
CHD1-209ENST00000512844 MAPK15Q8TD08 544 aa4.69□□□□□ -1.66
CHD1-209ENST00000512844 SMAP2Q8WU79 429 aaPredicted RBP4.69□□□□□ -1.66
CHD1-209ENST00000512844 KCNE4Q8WWG9 221 aa4.69□□□□□ -1.66
CHD1-209ENST00000512844 OTUB1Q96FW1 271 aaPredicted RBP4.69□□□□□ -1.66
CHD1-209ENST00000512844 WBP1Q96G27 269 aa4.69□□□□□ -1.66
CHD1-209ENST00000512844 POM121L2Q96KW2 1035 aa4.69□□□□□ -1.66
CHD1-209ENST00000512844 ZNF558Q96NG5 402 aa4.69□□□□□ -1.66
CHD1-209ENST00000512844 ZNF599Q96NL3 588 aa4.69□□□□□ -1.66
CHD1-209ENST00000512844 FEVQ99581 238 aa4.69□□□□□ -1.66
CHD1-209ENST00000512844 NYXQ9GZU5 481 aa4.69□□□□□ -1.66
CHD1-209ENST00000512844 GFRA4Q9GZZ7 299 aa4.69□□□□□ -1.66
CHD1-209ENST00000512844 ATP13A3Q9H7F0 1226 aa4.69□□□□□ -1.66
CHD1-209ENST00000512844 XAB2Q9HCS7 855 aaKnown RBP4.69□□□□□ -1.66
CHD1-209ENST00000512844 RNF186Q9NXI6 227 aa4.69□□□□□ -1.66
CHD1-209ENST00000512844 RNF215Q9Y6U7 377 aa4.69□□□□□ -1.66
CHD1-209ENST00000512844 R4GN57 208 aa4.69□□□□□ -1.66
CHD1-209ENST00000512844 A0A087X002 238 aa4.68□□□□□ -1.66
CHD1-209ENST00000512844 O00370 1275 aa4.68□□□□□ -1.66
CHD1-209ENST00000512844 SNX3O60493 162 aa4.68□□□□□ -1.66
CHD1-209ENST00000512844 KHDRBS3O75525 346 aaKnown RBP4.68□□□□□ -1.66
CHD1-209ENST00000512844 CELF2O95319 508 aaKnown RBP4.68□□□□□ -1.66
CHD1-209ENST00000512844 CD22P20273 847 aa4.68□□□□□ -1.66
CHD1-209ENST00000512844 CETN2P41208 172 aa4.68□□□□□ -1.66
CHD1-209ENST00000512844 GCNT1Q02742 428 aa4.68□□□□□ -1.66
CHD1-209ENST00000512844 OR4A47Q6IF82 309 aa4.68□□□□□ -1.66
CHD1-209ENST00000512844 RBPMS2Q6ZRY4 209 aaKnown RBP4.68□□□□□ -1.66
CHD1-209ENST00000512844 BMPERQ8N8U9 685 aa4.68□□□□□ -1.66
CHD1-209ENST00000512844 MRPS27Q92552 414 aaKnown RBP4.68□□□□□ -1.66
CHD1-209ENST00000512844 PROX1Q92786 737 aa4.68□□□□□ -1.66
CHD1-209ENST00000512844 KRT12Q99456 494 aa4.68□□□□□ -1.66
CHD1-209ENST00000512844 TRIM15Q9C019 465 aa4.68□□□□□ -1.66
CHD1-209ENST00000512844 TLE6Q9H808 572 aa4.68□□□□□ -1.66
CHD1-209ENST00000512844 GSN-AS1Q9NRJ2 163 aa4.68□□□□□ -1.66
CHD1-209ENST00000512844 WDR83OSQ9Y284 106 aa4.68□□□□□ -1.66
CHD1-209ENST00000512844 RPGRIP1LQ68CZ1 1315 aa4.68□□□□□ -1.66
CHD1-209ENST00000512844 A0A1W2PPM1 405 aa4.67□□□□□ -1.66
CHD1-209ENST00000512844 MSGN1A6NI15 193 aa4.67□□□□□ -1.66
CHD1-209ENST00000512844 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.67□□□□□ -1.66
CHD1-209ENST00000512844 DCXO43602 365 aa4.67□□□□□ -1.66
CHD1-209ENST00000512844 DDHD2O94830 711 aa4.67□□□□□ -1.66
CHD1-209ENST00000512844 DNTTP04053 509 aa4.67□□□□□ -1.66
CHD1-209ENST00000512844 CCDC175P0C221 793 aa4.67□□□□□ -1.66
CHD1-209ENST00000512844 EPCAMP16422 314 aa4.67□□□□□ -1.66
CHD1-209ENST00000512844 ACHEP22303 614 aa4.67□□□□□ -1.66
CHD1-209ENST00000512844 HSD17B3P37058 310 aa4.67□□□□□ -1.66
CHD1-209ENST00000512844 MMP12P39900 470 aa4.67□□□□□ -1.66
CHD1-209ENST00000512844 TSFMP43897 325 aaKnown RBP4.67□□□□□ -1.66
CHD1-209ENST00000512844 VAMP7P51809 220 aa4.67□□□□□ -1.66
CHD1-209ENST00000512844 LIMK1P53667 647 aa4.67□□□□□ -1.66
CHD1-209ENST00000512844 HUNKP57058 714 aa4.67□□□□□ -1.66
CHD1-209ENST00000512844 ACSM1Q08AH1 577 aa4.67□□□□□ -1.66
CHD1-209ENST00000512844 TRAP1Q12931 704 aaKnown RBP4.67□□□□□ -1.66
CHD1-209ENST00000512844 SGCGQ13326 291 aa4.67□□□□□ -1.66
CHD1-209ENST00000512844 NPTX1Q15818 432 aa4.67□□□□□ -1.66
CHD1-209ENST00000512844 KYNUQ16719 465 aa4.67□□□□□ -1.66
CHD1-209ENST00000512844 XKR6Q5GH73 641 aa4.67□□□□□ -1.66
CHD1-209ENST00000512844 XKR3Q5GH77 459 aa4.67□□□□□ -1.66
CHD1-209ENST00000512844 UGT3A1Q6NUS8 523 aa4.67□□□□□ -1.66
CHD1-209ENST00000512844 C16orf54Q6UWD8 224 aa4.67□□□□□ -1.66
CHD1-209ENST00000512844 OR8H2Q8N162 312 aa4.67□□□□□ -1.66
CHD1-209ENST00000512844 LSMEM1Q8N8F7 131 aa4.67□□□□□ -1.66
CHD1-209ENST00000512844 RASGEF1AQ8N9B8 481 aa4.67□□□□□ -1.66
CHD1-209ENST00000512844 TDRD5Q8NAT2 981 aaKnown RBP4.67□□□□□ -1.66
CHD1-209ENST00000512844 SLC37A3Q8NCC5 494 aa4.67□□□□□ -1.66
CHD1-209ENST00000512844 METTL21AQ8WXB1 218 aa4.67□□□□□ -1.66
CHD1-209ENST00000512844 SPSB1Q96BD6 273 aa4.67□□□□□ -1.66
CHD1-209ENST00000512844 LINC00615Q96LM1 132 aaPredicted RBP4.67□□□□□ -1.66
CHD1-209ENST00000512844 C4orf45Q96LM5 186 aa4.67□□□□□ -1.66
CHD1-209ENST00000512844 NECTIN4Q96NY8 510 aa4.67□□□□□ -1.66
CHD1-209ENST00000512844 MUS81Q96NY9 551 aa4.67□□□□□ -1.66
CHD1-209ENST00000512844 EGLN1Q9GZT9 426 aa4.67□□□□□ -1.66
CHD1-209ENST00000512844 PFDN4Q9NQP4 134 aa4.67□□□□□ -1.66
CHD1-209ENST00000512844 ERAP1Q9NZ08 941 aa4.67□□□□□ -1.66
CHD1-209ENST00000512844 PPP2R2CQ9Y2T4 447 aa4.67□□□□□ -1.66
CHD1-209ENST00000512844 A0A1B0GU03 582 aa4.66□□□□□ -1.66
CHD1-209ENST00000512844 FAM170AA1A519 330 aa4.66□□□□□ -1.66
CHD1-209ENST00000512844 KPNA7A9QM74 516 aa4.66□□□□□ -1.66
CHD1-209ENST00000512844 H7C423 109 aa4.66□□□□□ -1.66
CHD1-209ENST00000512844 PTGESO14684 152 aa4.66□□□□□ -1.66
CHD1-209ENST00000512844 AP5Z1O43299 807 aa4.66□□□□□ -1.66
CHD1-209ENST00000512844 SLCO2B1O94956 709 aa4.66□□□□□ -1.66
CHD1-209ENST00000512844 SEC24AO95486 1093 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms