RNA–Protein interactions for RNA: ENST00000512334.5

DDX41-214, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 686 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-214ENST00000512334 CEP128Q6ZU80 1094 aa15.27■□□□□ 0.04
DDX41-214ENST00000512334 ADCK2Q7Z695 626 aa15.27■□□□□ 0.04
DDX41-214ENST00000512334 NKAPQ8N5F7 415 aaKnown RBP15.27■□□□□ 0.04
DDX41-214ENST00000512334 MED8Q96G25 268 aa15.27■□□□□ 0.04
DDX41-214ENST00000512334 RUFY1Q96T51 708 aa15.27■□□□□ 0.04
DDX41-214ENST00000512334 SELENOSQ9BQE4 189 aa15.27■□□□□ 0.04
DDX41-214ENST00000512334 ARHGAP9Q9BRR9 750 aa15.27■□□□□ 0.04
DDX41-214ENST00000512334 DPH7Q9BTV6 452 aa15.27■□□□□ 0.04
DDX41-214ENST00000512334 TRIM54Q9BYV2 358 aa15.27■□□□□ 0.04
DDX41-214ENST00000512334 FAM129AQ9BZQ8 928 aa15.27■□□□□ 0.04
DDX41-214ENST00000512334 ATG10Q9H0Y0 220 aa15.27■□□□□ 0.04
DDX41-214ENST00000512334 CHST8Q9H2A9 424 aa15.27■□□□□ 0.04
DDX41-214ENST00000512334 CAB39LQ9H9S4 337 aa15.27■□□□□ 0.04
DDX41-214ENST00000512334 GPAMQ9HCL2 828 aa15.27■□□□□ 0.04
DDX41-214ENST00000512334 SLC6A20Q9NP91 592 aa15.27■□□□□ 0.04
DDX41-214ENST00000512334 CCDC177Q9NQR7 707 aaPredicted RBP15.27■□□□□ 0.04
DDX41-214ENST00000512334 TXLNGQ9NUQ3 528 aa15.27■□□□□ 0.04
DDX41-214ENST00000512334 PCMTD2Q9NV79 361 aa15.27■□□□□ 0.04
DDX41-214ENST00000512334 ARL15Q9NXU5 204 aa15.27■□□□□ 0.04
DDX41-214ENST00000512334 STOX2Q9P2F5 926 aaPredicted RBP15.27■□□□□ 0.04
DDX41-214ENST00000512334 MTO1Q9Y2Z2 717 aaKnown RBP15.27■□□□□ 0.04
DDX41-214ENST00000512334 FAM208BQ5VWN6 2430 aa15.27■□□□□ 0.03
DDX41-214ENST00000512334 ANKRD12Q6UB98 2062 aa15.26■□□□□ 0.03
DDX41-214ENST00000512334 H3BMH7 237 aa15.26■□□□□ 0.03
DDX41-214ENST00000512334 NRP2O60462 931 aa15.26■□□□□ 0.03
DDX41-214ENST00000512334 CTSVO60911 334 aa15.26■□□□□ 0.03
DDX41-214ENST00000512334 AGXTP21549 392 aa15.26■□□□□ 0.03
DDX41-214ENST00000512334 TBPL1P62380 186 aa15.26■□□□□ 0.03
DDX41-214ENST00000512334 POU4F1Q01851 419 aa15.26■□□□□ 0.03
DDX41-214ENST00000512334 PRDX1Q06830 199 aaKnown RBP15.26■□□□□ 0.03
DDX41-214ENST00000512334 USP10Q14694 798 aaKnown RBP15.26■□□□□ 0.03
DDX41-214ENST00000512334 EFTUD2Q15029 972 aaKnown RBP eCLIP15.26■□□□□ 0.033e-6■■■■■ 41.9
DDX41-214ENST00000512334 PRAMEF13Q5VWM6 474 aa15.26■□□□□ 0.03
DDX41-214ENST00000512334 LCN10Q6JVE6 187 aa15.26■□□□□ 0.03
DDX41-214ENST00000512334 TMEM207Q6UWW9 146 aa15.26■□□□□ 0.03
DDX41-214ENST00000512334 CEP97Q8IW35 865 aa15.26■□□□□ 0.03
DDX41-214ENST00000512334 TTC9Q92623 222 aa15.26■□□□□ 0.03
DDX41-214ENST00000512334 EXTL1Q92935 676 aa15.26■□□□□ 0.03
DDX41-214ENST00000512334 TSPAN17Q96FV3 270 aa15.26■□□□□ 0.03
DDX41-214ENST00000512334 BBC3Q96PG8 261 aaPredicted RBP15.26■□□□□ 0.03
DDX41-214ENST00000512334 RBBP8Q99708 897 aa15.26■□□□□ 0.03
DDX41-214ENST00000512334 MCMBPQ9BTE3 642 aa15.26■□□□□ 0.03
DDX41-214ENST00000512334 NDC1Q9BTX1 674 aa15.26■□□□□ 0.03
DDX41-214ENST00000512334 UTP6Q9NYH9 597 aaKnown RBP15.26■□□□□ 0.03
DDX41-214ENST00000512334 ANKMY1Q9P2S6 941 aa15.26■□□□□ 0.03
DDX41-214ENST00000512334 DHCR7Q9UBM7 475 aaKnown RBP15.26■□□□□ 0.03
DDX41-214ENST00000512334 SRPK3Q9UPE1 567 aa15.26■□□□□ 0.03
DDX41-214ENST00000512334 OR2A25A4D2G3 310 aa15.25■□□□□ 0.03
DDX41-214ENST00000512334 NPEPPSL1A6NEC2 478 aa15.25■□□□□ 0.03
DDX41-214ENST00000512334 C9J4A7 227 aa15.25■□□□□ 0.03
DDX41-214ENST00000512334 TERTO14746 1132 aaKnown RBP15.25■□□□□ 0.03
DDX41-214ENST00000512334 ATXN7O15265 892 aaPredicted RBP15.25■□□□□ 0.03
DDX41-214ENST00000512334 FAM155BO75949 473 aa15.25■□□□□ 0.03
DDX41-214ENST00000512334 GUCA1CO95843 209 aa15.25■□□□□ 0.03
DDX41-214ENST00000512334 C1QAP02745 245 aa15.25■□□□□ 0.03
DDX41-214ENST00000512334 ITGB2P05107 769 aa15.25■□□□□ 0.03
DDX41-214ENST00000512334 EIF2S1P05198 315 aaKnown RBP15.25■□□□□ 0.03
DDX41-214ENST00000512334 PTPN4P29074 926 aa15.25■□□□□ 0.03
DDX41-214ENST00000512334 SPRP35270 261 aaPredicted RBP15.25■□□□□ 0.03
DDX41-214ENST00000512334 VSX2P58304 361 aaPredicted RBP15.25■□□□□ 0.03
DDX41-214ENST00000512334 RPS18P62269 152 aaKnown RBP15.25■□□□□ 0.03
DDX41-214ENST00000512334 ABATP80404 500 aa15.25■□□□□ 0.03
DDX41-214ENST00000512334 NAE1Q13564 534 aa15.25■□□□□ 0.03
DDX41-214ENST00000512334 ERV3-1Q14264 604 aa15.25■□□□□ 0.03
DDX41-214ENST00000512334 SOWAHCQ53LP3 525 aaPredicted RBP15.25■□□□□ 0.03
DDX41-214ENST00000512334 TCTE1Q5JU00 501 aa15.25■□□□□ 0.03
DDX41-214ENST00000512334 ATP1A1-AS1Q5TC04 95 aa15.25■□□□□ 0.03
DDX41-214ENST00000512334 GRTP1Q5TC63 336 aa15.25■□□□□ 0.03
DDX41-214ENST00000512334 RHBDD2Q6NTF9 364 aa15.25■□□□□ 0.03
DDX41-214ENST00000512334 AGTRAPQ6RW13 159 aa15.25■□□□□ 0.03
DDX41-214ENST00000512334 TTC29Q8NA56 475 aaPredicted RBP15.25■□□□□ 0.03
DDX41-214ENST00000512334 MRRFQ96E11 262 aaKnown RBP15.25■□□□□ 0.03
DDX41-214ENST00000512334 PDLIM5Q96HC4 596 aaKnown RBP15.25■□□□□ 0.03
DDX41-214ENST00000512334 FMO2Q99518 471 aa15.25■□□□□ 0.03
DDX41-214ENST00000512334 ZFYVE21Q9BQ24 234 aa15.25■□□□□ 0.03
DDX41-214ENST00000512334 PLCD4Q9BRC7 762 aa15.25■□□□□ 0.03
DDX41-214ENST00000512334 GPR87Q9BY21 358 aa15.25■□□□□ 0.03
DDX41-214ENST00000512334 ACTL8Q9H568 366 aa15.25■□□□□ 0.03
DDX41-214ENST00000512334 POPDC3Q9HBV1 291 aa15.25■□□□□ 0.03
DDX41-214ENST00000512334 STARD5Q9NSY2 213 aa15.25■□□□□ 0.03
DDX41-214ENST00000512334 NDOR1Q9UHB4 597 aa15.25■□□□□ 0.03
DDX41-214ENST00000512334 IKZF3Q9UKT9 509 aa15.25■□□□□ 0.03
DDX41-214ENST00000512334 FARSAQ9Y285 508 aaKnown RBP15.25■□□□□ 0.03
DDX41-214ENST00000512334 PCDHGA6Q9Y5G7 932 aa15.25■□□□□ 0.03
DDX41-214ENST00000512334 KLK4Q9Y5K2 254 aa15.25■□□□□ 0.03
DDX41-214ENST00000512334 MGAQ8IWI9 3026 aa15.25■□□□□ 0.03
DDX41-214ENST00000512334 LOC400499M0QZD8 3231 aa15.25■□□□□ 0.03
DDX41-214ENST00000512334 CDC14CA4D256 554 aa15.24■□□□□ 0.03
DDX41-214ENST00000512334 CDC7O00311 574 aa15.24■□□□□ 0.03
DDX41-214ENST00000512334 PHGDHO43175 533 aaKnown RBP15.24■□□□□ 0.03
DDX41-214ENST00000512334 SRPX2O60687 465 aaPredicted RBP15.24■□□□□ 0.03
DDX41-214ENST00000512334 CREG1O75629 220 aa15.24■□□□□ 0.03
DDX41-214ENST00000512334 ENO2P09104 434 aaPredicted RBP15.24■□□□□ 0.03
DDX41-214ENST00000512334 STMN1P16949 149 aa15.24■□□□□ 0.03
DDX41-214ENST00000512334 ALAS2P22557 587 aa15.24■□□□□ 0.03
DDX41-214ENST00000512334 PHBP35232 272 aa15.24■□□□□ 0.03
DDX41-214ENST00000512334 ARSFP54793 590 aa15.24■□□□□ 0.03
DDX41-214ENST00000512334 AP1S2P56377 157 aa15.24■□□□□ 0.03
DDX41-214ENST00000512334 NAB1Q13506 487 aa15.24■□□□□ 0.03
DDX41-214ENST00000512334 GRM7Q14831 915 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms