RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 SCMH1Q96GD3 660 aa8.67□□□□□ -1.02
NUP54-211ENST00000512151 SEC16BQ96JE7 1060 aa8.67□□□□□ -1.02
NUP54-211ENST00000512151 ZCCHC2Q9C0B9 1178 aaKnown RBP8.67□□□□□ -1.02
NUP54-211ENST00000512151 OR52A5Q9H2C5 316 aa8.67□□□□□ -1.02
NUP54-211ENST00000512151 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.67□□□□□ -1.02
NUP54-211ENST00000512151 ANKRD10Q9NXR5 420 aa8.67□□□□□ -1.02
NUP54-211ENST00000512151 AMACRQ9UHK6 382 aa8.67□□□□□ -1.02
NUP54-211ENST00000512151 ALG6Q9Y672 507 aa8.67□□□□□ -1.02
NUP54-211ENST00000512151 FFAR3O14843 346 aa8.66□□□□□ -1.02
NUP54-211ENST00000512151 SMAD7O15105 426 aaKnown RBP8.66□□□□□ -1.02
NUP54-211ENST00000512151 GPR42O15529 346 aa8.66□□□□□ -1.02
NUP54-211ENST00000512151 ZSCAN12O43309 604 aa8.66□□□□□ -1.02
NUP54-211ENST00000512151 RNF8O76064 485 aa8.66□□□□□ -1.02
NUP54-211ENST00000512151 CHRM5P08912 532 aaPredicted RBP8.66□□□□□ -1.02
NUP54-211ENST00000512151 RARAP10276 462 aa8.66□□□□□ -1.02
NUP54-211ENST00000512151 CCNCP24863 283 aa8.66□□□□□ -1.02
NUP54-211ENST00000512151 PDHA2P29803 388 aa8.66□□□□□ -1.02
NUP54-211ENST00000512151 SERPINB6P35237 376 aa8.66□□□□□ -1.02
NUP54-211ENST00000512151 CD96P40200 585 aa8.66□□□□□ -1.02
NUP54-211ENST00000512151 RAB28P51157 221 aa8.66□□□□□ -1.02
NUP54-211ENST00000512151 NR0B1P51843 470 aaKnown RBP8.66□□□□□ -1.02
NUP54-211ENST00000512151 ARSFP54793 590 aa8.66□□□□□ -1.02
NUP54-211ENST00000512151 NAP1L1P55209 391 aaKnown RBP8.66□□□□□ -1.02
NUP54-211ENST00000512151 NUP107P57740 925 aa8.66□□□□□ -1.02
NUP54-211ENST00000512151 SLC25A11Q02978 314 aaKnown RBP8.66□□□□□ -1.02
NUP54-211ENST00000512151 ZBTB17Q13105 803 aa8.66□□□□□ -1.02
NUP54-211ENST00000512151 BOP1Q14137 746 aaKnown RBP8.66□□□□□ -1.02
NUP54-211ENST00000512151 PCSK7Q16549 785 aa8.66□□□□□ -1.02
NUP54-211ENST00000512151 ZNF658BQ4V348 819 aaPredicted RBP8.66□□□□□ -1.02
NUP54-211ENST00000512151 NCBP2-AS2Q69YL0 99 aa8.66□□□□□ -1.02
NUP54-211ENST00000512151 SPINK14Q6IE38 97 aa8.66□□□□□ -1.02
NUP54-211ENST00000512151 RIPOR1Q6ZS17 1223 aa8.66□□□□□ -1.02
NUP54-211ENST00000512151 HOOK3Q86VS8 718 aa8.66□□□□□ -1.02
NUP54-211ENST00000512151 LRRC49Q8IUZ0 686 aa8.66□□□□□ -1.02
NUP54-211ENST00000512151 CLYBLQ8N0X4 340 aa8.66□□□□□ -1.02
NUP54-211ENST00000512151 RNF10Q8N5U6 811 aaKnown RBP8.66□□□□□ -1.02
NUP54-211ENST00000512151 GOT1L1Q8NHS2 421 aaPredicted RBP8.66□□□□□ -1.02
NUP54-211ENST00000512151 RND1Q92730 232 aa8.66□□□□□ -1.02
NUP54-211ENST00000512151 FATE1Q969F0 183 aa8.66□□□□□ -1.02
NUP54-211ENST00000512151 TSGA13Q96PP4 275 aa8.66□□□□□ -1.02
NUP54-211ENST00000512151 NPAS2Q99743 824 aa8.66□□□□□ -1.02
NUP54-211ENST00000512151 TSGA10Q9BZW7 698 aa8.66□□□□□ -1.02
NUP54-211ENST00000512151 DMRT3Q9NQL9 472 aa8.66□□□□□ -1.02
NUP54-211ENST00000512151 CRIM1Q9NZV1 1036 aa8.66□□□□□ -1.02
NUP54-211ENST00000512151 STOX2Q9P2F5 926 aaPredicted RBP8.66□□□□□ -1.02
NUP54-211ENST00000512151 TRPS1Q9UHF7 1281 aa8.66□□□□□ -1.02
NUP54-211ENST00000512151 CHD3Q12873 2000 aaKnown RBP8.66□□□□□ -1.02
NUP54-211ENST00000512151 PHF3Q92576 2039 aaKnown RBP8.66□□□□□ -1.02
NUP54-211ENST00000512151 SCN2AQ99250 2005 aa8.65□□□□□ -1.02
NUP54-211ENST00000512151 ANK2Q01484 3957 aa8.65□□□□□ -1.02
NUP54-211ENST00000512151 UQCRHLA0A096LP55 91 aa8.65□□□□□ -1.02
NUP54-211ENST00000512151 A0A1B0GTH9 108 aa8.65□□□□□ -1.02
NUP54-211ENST00000512151 KCNK1O00180 336 aa8.65□□□□□ -1.02
NUP54-211ENST00000512151 DYNC1I1O14576 645 aa8.65□□□□□ -1.02
NUP54-211ENST00000512151 BUD23O43709 281 aaKnown RBP8.65□□□□□ -1.02
NUP54-211ENST00000512151 MLYCDO95822 493 aa8.65□□□□□ -1.02
NUP54-211ENST00000512151 CD48P09326 243 aa8.65□□□□□ -1.02
NUP54-211ENST00000512151 MYBL2P10244 700 aa8.65□□□□□ -1.02
NUP54-211ENST00000512151 DESP17661 470 aa8.65□□□□□ -1.02
NUP54-211ENST00000512151 MAGP20916 626 aa8.65□□□□□ -1.02
NUP54-211ENST00000512151 AKT1P31749 480 aa8.65□□□□□ -1.02
NUP54-211ENST00000512151 PCK1P35558 622 aa8.65□□□□□ -1.02
NUP54-211ENST00000512151 GRIA3P42263 894 aa8.65□□□□□ -1.02
NUP54-211ENST00000512151 NKX6-1P78426 367 aaPredicted RBP8.65□□□□□ -1.02
NUP54-211ENST00000512151 PPP2R2BQ00005 443 aa8.65□□□□□ -1.02
NUP54-211ENST00000512151 PMPCAQ10713 525 aa8.65□□□□□ -1.02
NUP54-211ENST00000512151 PTPRCAPQ14761 206 aa8.65□□□□□ -1.02
NUP54-211ENST00000512151 OR1C1Q15619 314 aa8.65□□□□□ -1.02
NUP54-211ENST00000512151 LONRF2Q1L5Z9 754 aa8.65□□□□□ -1.02
NUP54-211ENST00000512151 BCL7AQ4VC05 210 aa8.65□□□□□ -1.02
NUP54-211ENST00000512151 EMC4Q5J8M3 183 aa8.65□□□□□ -1.02
NUP54-211ENST00000512151 TMEM211Q6ICI0 200 aa8.65□□□□□ -1.02
NUP54-211ENST00000512151 C11orf63Q6NUN7 778 aa8.65□□□□□ -1.02
NUP54-211ENST00000512151 ARSKQ6UWY0 536 aa8.65□□□□□ -1.02
NUP54-211ENST00000512151 GALNTL5Q7Z4T8 443 aa8.65□□□□□ -1.02
NUP54-211ENST00000512151 EID3Q8N140 333 aa8.65□□□□□ -1.02
NUP54-211ENST00000512151 VWA5B2Q8N398 1253 aa8.65□□□□□ -1.02
NUP54-211ENST00000512151 TXLNBQ8N3L3 684 aa8.65□□□□□ -1.02
NUP54-211ENST00000512151 LMNTD1Q8N9Z9 388 aa8.65□□□□□ -1.02
NUP54-211ENST00000512151 TADA1Q96BN2 335 aa8.65□□□□□ -1.02
NUP54-211ENST00000512151 MIEF2Q96C03 454 aa8.65□□□□□ -1.02
NUP54-211ENST00000512151 LINC00615Q96LM1 132 aaPredicted RBP8.65□□□□□ -1.02
NUP54-211ENST00000512151 IMMP1LQ96LU5 166 aa8.65□□□□□ -1.02
NUP54-211ENST00000512151 CCM2Q9BSQ5 444 aa8.65□□□□□ -1.02
NUP54-211ENST00000512151 CEP41Q9BYV8 373 aa8.65□□□□□ -1.02
NUP54-211ENST00000512151 ZNF700Q9H0M5 742 aa8.65□□□□□ -1.02
NUP54-211ENST00000512151 MVB12BQ9H7P6 319 aa8.65□□□□□ -1.02
NUP54-211ENST00000512151 SLC24A3Q9HC58 644 aa8.65□□□□□ -1.02
NUP54-211ENST00000512151 RIC8BQ9NVN3 520 aa8.65□□□□□ -1.02
NUP54-211ENST00000512151 GNPTGQ9UJJ9 305 aa8.65□□□□□ -1.02
NUP54-211ENST00000512151 PACSIN2Q9UNF0 486 aaPredicted RBP8.65□□□□□ -1.02
NUP54-211ENST00000512151 MPDZO75970 2070 aa8.65□□□□□ -1.02
NUP54-211ENST00000512151 ARID1AO14497 2285 aa8.65□□□□□ -1.03
NUP54-211ENST00000512151 A6NNC1 897 aa8.64□□□□□ -1.03
NUP54-211ENST00000512151 A8MUI8 341 aa8.64□□□□□ -1.03
NUP54-211ENST00000512151 IDSB3KWA1 339 aa8.64□□□□□ -1.03
NUP54-211ENST00000512151 KIF2AO00139 706 aaPredicted RBP8.64□□□□□ -1.03
NUP54-211ENST00000512151 FTCDO95954 541 aa8.64□□□□□ -1.03
NUP54-211ENST00000512151 TUBB4AP04350 444 aa8.64□□□□□ -1.03
NUP54-211ENST00000512151 MSH3P20585 1137 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms