RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 MSX1P28360 303 aa10.99□□□□□ -0.65
RNF4-216ENST00000511859 CDC25BP30305 580 aa10.99□□□□□ -0.65
RNF4-216ENST00000511859 CHRNB4P30926 498 aa10.99□□□□□ -0.65
RNF4-216ENST00000511859 ARHGAP25P42331 645 aa10.99□□□□□ -0.65
RNF4-216ENST00000511859 VSX2P58304 361 aaPredicted RBP10.99□□□□□ -0.65
RNF4-216ENST00000511859 TFF3Q07654 80 aa10.99□□□□□ -0.65
RNF4-216ENST00000511859 SF1Q15637 639 aaKnown RBP10.99□□□□□ -0.65
RNF4-216ENST00000511859 MUM1Q2TAK8 710 aa10.99□□□□□ -0.65
RNF4-216ENST00000511859 ARHGEF18Q6ZSZ5 1173 aa10.99□□□□□ -0.65
RNF4-216ENST00000511859 TMTC1Q8IUR5 882 aa10.99□□□□□ -0.65
RNF4-216ENST00000511859 SIAH3Q8IW03 269 aa10.99□□□□□ -0.65
RNF4-216ENST00000511859 CLDN19Q8N6F1 224 aa10.99□□□□□ -0.65
RNF4-216ENST00000511859 TMEM178AQ8NBL3 297 aa10.99□□□□□ -0.65
RNF4-216ENST00000511859 SCMH1Q96GD3 660 aa10.99□□□□□ -0.65
RNF4-216ENST00000511859 FRMD6Q96NE9 622 aa10.99□□□□□ -0.65
RNF4-216ENST00000511859 FICDQ9BVA6 458 aa10.99□□□□□ -0.65
RNF4-216ENST00000511859 TGIF2Q9GZN2 237 aa10.99□□□□□ -0.65
RNF4-216ENST00000511859 NPDC1Q9NQX5 325 aaPredicted RBP10.99□□□□□ -0.65
RNF4-216ENST00000511859 C14orf105Q9NVL8 296 aa10.99□□□□□ -0.65
RNF4-216ENST00000511859 UVRAGQ9P2Y5 699 aa10.99□□□□□ -0.65
RNF4-216ENST00000511859 ZC3H7BQ9UGR2 993 aaKnown RBP10.99□□□□□ -0.65
RNF4-216ENST00000511859 ST6GALNAC2Q9UJ37 374 aa10.99□□□□□ -0.65
RNF4-216ENST00000511859 PLAGL1Q9UM63 463 aa10.99□□□□□ -0.65
RNF4-216ENST00000511859 FN1P02751 2386 aaKnown RBP10.98□□□□□ -0.65
RNF4-216ENST00000511859 HEATR5BQ9P2D3 2071 aa10.98□□□□□ -0.65
RNF4-216ENST00000511859 TRBV5-4A0A0C4DH59 114 aa10.98□□□□□ -0.65
RNF4-216ENST00000511859 A8MUI8 341 aa10.98□□□□□ -0.65
RNF4-216ENST00000511859 PRPF4O43172 522 aaKnown RBP eCLIP10.98□□□□□ -0.65
RNF4-216ENST00000511859 TOXO94900 526 aa10.98□□□□□ -0.65
RNF4-216ENST00000511859 AGTP01019 485 aa10.98□□□□□ -0.65
RNF4-216ENST00000511859 CD9P21926 228 aa10.98□□□□□ -0.65
RNF4-216ENST00000511859 PKLRP30613 574 aa10.98□□□□□ -0.65
RNF4-216ENST00000511859 ADAM8P78325 824 aa10.98□□□□□ -0.65
RNF4-216ENST00000511859 ACER2Q5QJU3 275 aa10.98□□□□□ -0.65
RNF4-216ENST00000511859 ALKBH5Q6P6C2 394 aaKnown RBP10.98□□□□□ -0.65
RNF4-216ENST00000511859 TMEM205Q6UW68 189 aa10.98□□□□□ -0.65
RNF4-216ENST00000511859 RANBP10Q6VN20 620 aa10.98□□□□□ -0.65
RNF4-216ENST00000511859 C3P1Q6ZMU1 363 aa10.98□□□□□ -0.65
RNF4-216ENST00000511859 SERPINA9Q86WD7 417 aa10.98□□□□□ -0.65
RNF4-216ENST00000511859 RFX6Q8HWS3 928 aa10.98□□□□□ -0.65
RNF4-216ENST00000511859 ZNF567Q8N184 647 aa10.98□□□□□ -0.65
RNF4-216ENST00000511859 DTWD1Q8N5C7 304 aa10.98□□□□□ -0.65
RNF4-216ENST00000511859 HORMAD2Q8N7B1 307 aa10.98□□□□□ -0.65
RNF4-216ENST00000511859 TC2NQ8N9U0 490 aa10.98□□□□□ -0.65
RNF4-216ENST00000511859 LINC01555Q8NAE3 123 aa10.98□□□□□ -0.65
RNF4-216ENST00000511859 MDS2Q8NDY4 140 aa10.98□□□□□ -0.65
RNF4-216ENST00000511859 OR13C4Q8NGS5 318 aa10.98□□□□□ -0.65
RNF4-216ENST00000511859 SPATA3Q8NHX4 192 aa10.98□□□□□ -0.65
RNF4-216ENST00000511859 ELMO1Q92556 727 aa10.98□□□□□ -0.65
RNF4-216ENST00000511859 IQCDQ96DY2 449 aa10.98□□□□□ -0.65
RNF4-216ENST00000511859 MVB12AQ96EY5 273 aa10.98□□□□□ -0.65
RNF4-216ENST00000511859 ALPK1Q96QP1 1244 aa10.98□□□□□ -0.65
RNF4-216ENST00000511859 TSPAN10Q9H1Z9 355 aaPredicted RBP10.98□□□□□ -0.65
RNF4-216ENST00000511859 KLHL1Q9NR64 748 aa10.98□□□□□ -0.65
RNF4-216ENST00000511859 DNAJB12Q9NXW2 375 aaKnown RBP10.98□□□□□ -0.65
RNF4-216ENST00000511859 CTTNBP2NLQ9P2B4 639 aa10.98□□□□□ -0.65
RNF4-216ENST00000511859 ASB1Q9Y576 335 aa10.98□□□□□ -0.65
RNF4-216ENST00000511859 FAM169AQ9Y6X4 670 aa10.98□□□□□ -0.65
RNF4-216ENST00000511859 MPDZO75970 2070 aa10.97□□□□□ -0.65
RNF4-216ENST00000511859 SLC5A10A0PJK1 596 aa10.97□□□□□ -0.65
RNF4-216ENST00000511859 BHMG1C9JSJ3 638 aaPredicted RBP10.97□□□□□ -0.65
RNF4-216ENST00000511859 CDK2AP1O14519 115 aa10.97□□□□□ -0.65
RNF4-216ENST00000511859 ANXA9O76027 345 aa10.97□□□□□ -0.65
RNF4-216ENST00000511859 MED26O95402 600 aa10.97□□□□□ -0.65
RNF4-216ENST00000511859 FTH1P02794 183 aa10.97□□□□□ -0.65
RNF4-216ENST00000511859 MC4RP32245 332 aa10.97□□□□□ -0.65
RNF4-216ENST00000511859 CD96P40200 585 aa10.97□□□□□ -0.65
RNF4-216ENST00000511859 CDKN1CP49918 316 aaPredicted RBP10.97□□□□□ -0.65
RNF4-216ENST00000511859 EMP3P54852 163 aa10.97□□□□□ -0.65
RNF4-216ENST00000511859 GEMP55040 296 aa10.97□□□□□ -0.65
RNF4-216ENST00000511859 MYBPHQ13203 477 aa10.97□□□□□ -0.65
RNF4-216ENST00000511859 TUBA3CQ13748 450 aa10.97□□□□□ -0.65
RNF4-216ENST00000511859 BRD3Q15059 726 aa10.97□□□□□ -0.65
RNF4-216ENST00000511859 CEBPEQ15744 281 aa10.97□□□□□ -0.65
RNF4-216ENST00000511859 TAZQ16635 292 aa10.97□□□□□ -0.65
RNF4-216ENST00000511859 MEP1AQ16819 746 aa10.97□□□□□ -0.65
RNF4-216ENST00000511859 DNAJC21Q5F1R6 531 aaKnown RBP10.97□□□□□ -0.65
RNF4-216ENST00000511859 H3F3CQ6NXT2 135 aa10.97□□□□□ -0.65
RNF4-216ENST00000511859 TUBA3EQ6PEY2 450 aa10.97□□□□□ -0.65
RNF4-216ENST00000511859 CHERPQ8IWX8 916 aaKnown RBP10.97□□□□□ -0.65
RNF4-216ENST00000511859 CLYBLQ8N0X4 340 aa10.97□□□□□ -0.65
RNF4-216ENST00000511859 OR8K1Q8NGG5 319 aa10.97□□□□□ -0.65
RNF4-216ENST00000511859 HDAC10Q969S8 669 aa10.97□□□□□ -0.65
RNF4-216ENST00000511859 SIGLEC12Q96PQ1 595 aa10.97□□□□□ -0.65
RNF4-216ENST00000511859 DNAJC7Q99615 494 aa10.97□□□□□ -0.65
RNF4-216ENST00000511859 MDFIQ99750 246 aa10.97□□□□□ -0.65
RNF4-216ENST00000511859 UTP23Q9BRU9 249 aaKnown RBP10.97□□□□□ -0.65
RNF4-216ENST00000511859 REPIN1Q9BWE0 567 aaKnown RBP10.97□□□□□ -0.65
RNF4-216ENST00000511859 YIPF2Q9BWQ6 316 aa10.97□□□□□ -0.65
RNF4-216ENST00000511859 MKKSQ9NPJ1 570 aaPredicted RBP10.97□□□□□ -0.65
RNF4-216ENST00000511859 ABHD10Q9NUJ1 306 aa10.97□□□□□ -0.65
RNF4-216ENST00000511859 TRPC4Q9UBN4 977 aa10.97□□□□□ -0.65
RNF4-216ENST00000511859 TRHDEQ9UKU6 1024 aa10.97□□□□□ -0.65
RNF4-216ENST00000511859 KLK4Q9Y5K2 254 aa10.97□□□□□ -0.65
RNF4-216ENST00000511859 ZNF407Q9C0G0 2248 aa10.97□□□□□ -0.65
RNF4-216ENST00000511859 A0A087X0T9 212 aa10.96□□□□□ -0.65
RNF4-216ENST00000511859 H7C0S8 307 aa10.96□□□□□ -0.65
RNF4-216ENST00000511859 CTSVO60911 334 aa10.96□□□□□ -0.65
RNF4-216ENST00000511859 SUN1O94901 812 aa10.96□□□□□ -0.65
RNF4-216ENST00000511859 RPN2P04844 631 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms