RNA–Protein interactions for RNA: ENST00000511663.5

SH3BP2-220, Transcript of SH3 domain binding protein 2, humanhuman

TSL 5

Gene SH3BP2, Length 966 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3BP2-220ENST00000511663 RPA3P35244 121 aaPredicted RBP18.4■□□□□ 0.54
SH3BP2-220ENST00000511663 TLR1Q15399 786 aa18.4■□□□□ 0.54
SH3BP2-220ENST00000511663 CCSMST1Q4G0I0 132 aa18.4■□□□□ 0.54
SH3BP2-220ENST00000511663 CRB2Q5IJ48 1285 aa18.4■□□□□ 0.54
SH3BP2-220ENST00000511663 FRMPD2BQ6IN97 320 aa18.4■□□□□ 0.54
SH3BP2-220ENST00000511663 CES3Q6UWW8 571 aa18.4■□□□□ 0.54
SH3BP2-220ENST00000511663 ISLR2Q6UXK2 745 aa18.4■□□□□ 0.54
SH3BP2-220ENST00000511663 ST6GALNAC3Q8NDV1 305 aa18.4■□□□□ 0.54
SH3BP2-220ENST00000511663 OR11G2Q8NGC1 345 aa18.4■□□□□ 0.54
SH3BP2-220ENST00000511663 OR9A1PQ8NGU1 263 aa18.4■□□□□ 0.54
SH3BP2-220ENST00000511663 STT3BQ8TCJ2 826 aa18.4■□□□□ 0.54
SH3BP2-220ENST00000511663 INPP5DQ92835 1189 aa18.4■□□□□ 0.54
SH3BP2-220ENST00000511663 MFSD3Q96ES6 412 aa18.4■□□□□ 0.54
SH3BP2-220ENST00000511663 LMF1Q96S06 567 aa18.4■□□□□ 0.54
SH3BP2-220ENST00000511663 DPH7Q9BTV6 452 aa18.4■□□□□ 0.54
SH3BP2-220ENST00000511663 ACAT2Q9BWD1 397 aa18.4■□□□□ 0.54
SH3BP2-220ENST00000511663 MRPS30Q9NP92 439 aaKnown RBP18.4■□□□□ 0.54
SH3BP2-220ENST00000511663 NOVA2Q9UNW9 492 aaKnown RBP18.4■□□□□ 0.54
SH3BP2-220ENST00000511663 CRYL1Q9Y2S2 319 aa18.4■□□□□ 0.54
SH3BP2-220ENST00000511663 LOC105369274A0A096LPK9 316 aa18.39■□□□□ 0.53
SH3BP2-220ENST00000511663 LOC102723532A0A0G2JNH3 316 aa18.39■□□□□ 0.53
SH3BP2-220ENST00000511663 GOLGA8KD6RF30 607 aa18.39■□□□□ 0.53
SH3BP2-220ENST00000511663 GOLGA8TH3BQL2 631 aa18.39■□□□□ 0.53
SH3BP2-220ENST00000511663 PHF2O75151 1096 aa18.39■□□□□ 0.53
SH3BP2-220ENST00000511663 SNRNP200O75643 2136 aaKnown RBP18.39■□□□□ 0.53
SH3BP2-220ENST00000511663 MATN4O95460 622 aa18.39■□□□□ 0.53
SH3BP2-220ENST00000511663 HPP00738 406 aa18.39■□□□□ 0.53
SH3BP2-220ENST00000511663 UQCRHP07919 91 aa18.39■□□□□ 0.53
SH3BP2-220ENST00000511663 ZGLP1P0C6A0 271 aa18.39■□□□□ 0.53
SH3BP2-220ENST00000511663 RNF224P0DH78 156 aa18.39■□□□□ 0.53
SH3BP2-220ENST00000511663 ACPPP15309 386 aa18.39■□□□□ 0.53
SH3BP2-220ENST00000511663 FBLP22087 321 aaKnown RBP18.39■□□□□ 0.53
SH3BP2-220ENST00000511663 ATP5DP30049 168 aa18.39■□□□□ 0.53
SH3BP2-220ENST00000511663 HSD17B2P37059 387 aa18.39■□□□□ 0.53
SH3BP2-220ENST00000511663 KLC1Q07866 573 aa18.39■□□□□ 0.53
SH3BP2-220ENST00000511663 ZNF169Q14929 603 aaPredicted RBP18.39■□□□□ 0.53
SH3BP2-220ENST00000511663 CTSL3PQ5NE16 218 aa18.39■□□□□ 0.53
SH3BP2-220ENST00000511663 B3GNTL1Q67FW5 361 aaPredicted RBP18.39■□□□□ 0.53
SH3BP2-220ENST00000511663 CASC4Q6P4E1 433 aa18.39■□□□□ 0.53
SH3BP2-220ENST00000511663 IGFL2Q6UWQ7 119 aa18.39■□□□□ 0.53
SH3BP2-220ENST00000511663 LURAP1LQ8IV03 231 aa18.39■□□□□ 0.53
SH3BP2-220ENST00000511663 PRSS58Q8IYP2 241 aa18.39■□□□□ 0.53
SH3BP2-220ENST00000511663 OR4N4Q8N0Y3 316 aa18.39■□□□□ 0.53
SH3BP2-220ENST00000511663 SMPDL3AQ92484 453 aa18.39■□□□□ 0.53
SH3BP2-220ENST00000511663 FAM136AQ96C01 138 aa18.39■□□□□ 0.53
SH3BP2-220ENST00000511663 BIRC8Q96P09 236 aa18.39■□□□□ 0.53
SH3BP2-220ENST00000511663 SYBUQ9NX95 663 aa18.39■□□□□ 0.53
SH3BP2-220ENST00000511663 C3orf18Q9UK00 162 aa18.39■□□□□ 0.53
SH3BP2-220ENST00000511663 SOX13Q9UN79 622 aa18.39■□□□□ 0.53
SH3BP2-220ENST00000511663 USP9YO00507 2555 aaPredicted RBP18.39■□□□□ 0.53
SH3BP2-220ENST00000511663 ICE1Q9Y2F5 2266 aa18.39■□□□□ 0.53
SH3BP2-220ENST00000511663 WIPF3A6NGB9 483 aa18.38■□□□□ 0.53
SH3BP2-220ENST00000511663 NIPSNAP2O75323 286 aa18.38■□□□□ 0.53
SH3BP2-220ENST00000511663 CCNDBP1O95273 360 aa18.38■□□□□ 0.53
SH3BP2-220ENST00000511663 LDLRP01130 860 aa18.38■□□□□ 0.53
SH3BP2-220ENST00000511663 CATP04040 527 aaKnown RBP18.38■□□□□ 0.53
SH3BP2-220ENST00000511663 ANXA5P08758 320 aa18.38■□□□□ 0.53
SH3BP2-220ENST00000511663 PKMP14618 531 aaKnown RBP18.38■□□□□ 0.53
SH3BP2-220ENST00000511663 TPSB2P20231 275 aa18.38■□□□□ 0.53
SH3BP2-220ENST00000511663 OGNP20774 298 aaKnown RBP18.38■□□□□ 0.53
SH3BP2-220ENST00000511663 TSFMP43897 325 aaKnown RBP18.38■□□□□ 0.53
SH3BP2-220ENST00000511663 KCNJ1P48048 391 aa18.38■□□□□ 0.53
SH3BP2-220ENST00000511663 EMP3P54852 163 aa18.38■□□□□ 0.53
SH3BP2-220ENST00000511663 ADARP55265 1226 aaKnown RBP18.38■□□□□ 0.53
SH3BP2-220ENST00000511663 FASTKQ14296 549 aaKnown RBP18.38■□□□□ 0.53
SH3BP2-220ENST00000511663 ARHGAP19Q14CB8 494 aa18.38■□□□□ 0.53
SH3BP2-220ENST00000511663 SIX1Q15475 284 aaPredicted RBP18.38■□□□□ 0.53
SH3BP2-220ENST00000511663 TPSAB1Q15661 275 aa18.38■□□□□ 0.53
SH3BP2-220ENST00000511663 TTLL9Q3SXZ7 439 aa18.38■□□□□ 0.53
SH3BP2-220ENST00000511663 FBXO42Q6P3S6 717 aa18.38■□□□□ 0.53
SH3BP2-220ENST00000511663 LINC00696Q6ZRV3 163 aa18.38■□□□□ 0.53
SH3BP2-220ENST00000511663 RNF44Q7L0R7 432 aa18.38■□□□□ 0.53
SH3BP2-220ENST00000511663 KCNMB4Q86W47 210 aa18.38■□□□□ 0.53
SH3BP2-220ENST00000511663 GAS2L3Q86XJ1 694 aa18.38■□□□□ 0.53
SH3BP2-220ENST00000511663 KBTBD2Q8IY47 623 aa18.38■□□□□ 0.53
SH3BP2-220ENST00000511663 LPGAT1Q92604 370 aa18.38■□□□□ 0.53
SH3BP2-220ENST00000511663 RERGQ96A58 199 aaPredicted RBP18.38■□□□□ 0.53
SH3BP2-220ENST00000511663 BARD1Q99728 777 aaKnown RBP18.38■□□□□ 0.53
SH3BP2-220ENST00000511663 CCDC68Q9H2F9 335 aa18.38■□□□□ 0.53
SH3BP2-220ENST00000511663 ZNF160Q9HCG1 818 aa18.38■□□□□ 0.53
SH3BP2-220ENST00000511663 LZTFL1Q9NQ48 299 aa18.38■□□□□ 0.53
SH3BP2-220ENST00000511663 SAMD15Q9P1V8 674 aa18.38■□□□□ 0.53
SH3BP2-220ENST00000511663 NSG1A0A0A6YYJ2 146 aa18.37■□□□□ 0.53
SH3BP2-220ENST00000511663 A0A1W2PPV9 198 aa18.37■□□□□ 0.53
SH3BP2-220ENST00000511663 MAGEB16A2A368 324 aa18.37■□□□□ 0.53
SH3BP2-220ENST00000511663 OR2A25A4D2G3 310 aa18.37■□□□□ 0.53
SH3BP2-220ENST00000511663 H0YGG7 62 aa18.37■□□□□ 0.53
SH3BP2-220ENST00000511663 TXNDC9O14530 226 aa18.37■□□□□ 0.53
SH3BP2-220ENST00000511663 CEP104O60308 925 aa18.37■□□□□ 0.53
SH3BP2-220ENST00000511663 USP1O94782 785 aa18.37■□□□□ 0.53
SH3BP2-220ENST00000511663 TERF1P54274 439 aa18.37■□□□□ 0.53
SH3BP2-220ENST00000511663 EMP2P54851 167 aa18.37■□□□□ 0.53
SH3BP2-220ENST00000511663 PER3P56645 1201 aa18.37■□□□□ 0.53
SH3BP2-220ENST00000511663 ARF3P61204 181 aaPredicted RBP18.37■□□□□ 0.53
SH3BP2-220ENST00000511663 TYSND1Q2T9J0 566 aa18.37■□□□□ 0.53
SH3BP2-220ENST00000511663 KLHL38Q2WGJ6 581 aa18.37■□□□□ 0.53
SH3BP2-220ENST00000511663 ARMC3Q5W041 872 aa18.37■□□□□ 0.53
SH3BP2-220ENST00000511663 NEPROQ6NW34 567 aa18.37■□□□□ 0.53
SH3BP2-220ENST00000511663 FAM180AQ6UWF9 173 aa18.37■□□□□ 0.53
SH3BP2-220ENST00000511663 SUSD1Q6UWL2 747 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms