RNA–Protein interactions for RNA: ENST00000511009.1

MBD4-209, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 2

Gene MBD4, Length 530 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-209ENST00000511009 ZMYND12Q9H0C1 365 aa4.36□□□□□ -1.71
MBD4-209ENST00000511009 TNMDQ9H2S6 317 aa4.36□□□□□ -1.71
MBD4-209ENST00000511009 UPF2Q9HAU5 1272 aaKnown RBP4.36□□□□□ -1.71
MBD4-209ENST00000511009 COMMD8Q9NX08 183 aa4.36□□□□□ -1.71
MBD4-209ENST00000511009 ZDHHC2Q9UIJ5 367 aa4.36□□□□□ -1.71
MBD4-209ENST00000511009 GPR132Q9UNW8 380 aa4.36□□□□□ -1.71
MBD4-209ENST00000511009 PA2G4Q9UQ80 394 aaKnown RBP4.36□□□□□ -1.71
MBD4-209ENST00000511009 A0A0A6YYC8 382 aaPredicted RBP4.35□□□□□ -1.71
MBD4-209ENST00000511009 CTAGE9A4FU28 777 aa4.35□□□□□ -1.71
MBD4-209ENST00000511009 CLEC18AA5D8T8 446 aa4.35□□□□□ -1.71
MBD4-209ENST00000511009 TMEM150CB9EJG8 249 aa4.35□□□□□ -1.71
MBD4-209ENST00000511009 F8VVB4 439 aa4.35□□□□□ -1.71
MBD4-209ENST00000511009 F8VWA3 439 aa4.35□□□□□ -1.71
MBD4-209ENST00000511009 I3L1I5 382 aaPredicted RBP4.35□□□□□ -1.71
MBD4-209ENST00000511009 CACNB4O00305 520 aaPredicted RBP4.35□□□□□ -1.71
MBD4-209ENST00000511009 CTSVO60911 334 aa4.35□□□□□ -1.71
MBD4-209ENST00000511009 ATP9AO75110 1047 aa4.35□□□□□ -1.71
MBD4-209ENST00000511009 NME6O75414 186 aaPredicted RBP4.35□□□□□ -1.71
MBD4-209ENST00000511009 CTAGE8P0CG41 777 aa4.35□□□□□ -1.71
MBD4-209ENST00000511009 CYP2A7P20853 494 aa4.35□□□□□ -1.71
MBD4-209ENST00000511009 CDH3P22223 829 aa4.35□□□□□ -1.71
MBD4-209ENST00000511009 CDKN2AP42771 156 aaKnown RBP4.35□□□□□ -1.71
MBD4-209ENST00000511009 IER3P46695 156 aa4.35□□□□□ -1.71
MBD4-209ENST00000511009 CLK1P49759 484 aaKnown RBP4.35□□□□□ -1.71
MBD4-209ENST00000511009 PDLIM4P50479 330 aa4.35□□□□□ -1.71
MBD4-209ENST00000511009 CLDN15P56746 228 aa4.35□□□□□ -1.71
MBD4-209ENST00000511009 AKAP17AQ02040 695 aaKnown RBP4.35□□□□□ -1.71
MBD4-209ENST00000511009 CACNG1Q06432 222 aa4.35□□□□□ -1.71
MBD4-209ENST00000511009 LTBQ06643 244 aa4.35□□□□□ -1.71
MBD4-209ENST00000511009 RASGEF1BQ0VAM2 473 aa4.35□□□□□ -1.71
MBD4-209ENST00000511009 GAGE5Q13069 117 aa4.35□□□□□ -1.71
MBD4-209ENST00000511009 GAGE6Q13070 117 aa4.35□□□□□ -1.71
MBD4-209ENST00000511009 SGCBQ16585 318 aa4.35□□□□□ -1.71
MBD4-209ENST00000511009 KIF19Q2TAC6 998 aa4.35□□□□□ -1.71
MBD4-209ENST00000511009 ITPRIPL2Q3MIP1 535 aa4.35□□□□□ -1.71
MBD4-209ENST00000511009 AARDQ4LEZ3 155 aa4.35□□□□□ -1.71
MBD4-209ENST00000511009 PARP10Q53GL7 1025 aa4.35□□□□□ -1.71
MBD4-209ENST00000511009 LYSMD4Q5XG99 296 aa4.35□□□□□ -1.71
MBD4-209ENST00000511009 OR4A47Q6IF82 309 aa4.35□□□□□ -1.71
MBD4-209ENST00000511009 FAM166AQ6J272 317 aa4.35□□□□□ -1.71
MBD4-209ENST00000511009 TOM1L2Q6ZVM7 507 aa4.35□□□□□ -1.71
MBD4-209ENST00000511009 SLC9B2Q86UD5 537 aa4.35□□□□□ -1.71
MBD4-209ENST00000511009 ANKRD46Q86W74 232 aa4.35□□□□□ -1.71
MBD4-209ENST00000511009 MEX3DQ86XN8 651 aaKnown RBP4.35□□□□□ -1.71
MBD4-209ENST00000511009 CNTN4Q8IWV2 1026 aa4.35□□□□□ -1.71
MBD4-209ENST00000511009 CTAGE4Q8IX94 777 aa4.35□□□□□ -1.71
MBD4-209ENST00000511009 AQP12AQ8IXF9 295 aa4.35□□□□□ -1.71
MBD4-209ENST00000511009 ZNF619Q8N2I2 560 aa4.35□□□□□ -1.71
MBD4-209ENST00000511009 SFRP1Q8N474 314 aa4.35□□□□□ -1.71
MBD4-209ENST00000511009 RTL3Q8N8U3 475 aaKnown RBP4.35□□□□□ -1.71
MBD4-209ENST00000511009 CLEC18CQ8NCF0 446 aa4.35□□□□□ -1.71
MBD4-209ENST00000511009 OR2T12Q8NG77 320 aa4.35□□□□□ -1.71
MBD4-209ENST00000511009 ZNF473Q8WTR7 871 aaKnown RBP4.35□□□□□ -1.71
MBD4-209ENST00000511009 C17orf77Q96MU5 243 aa4.35□□□□□ -1.71
MBD4-209ENST00000511009 ATG101Q9BSB4 218 aa4.35□□□□□ -1.71
MBD4-209ENST00000511009 LRRC1Q9BTT6 524 aa4.35□□□□□ -1.71
MBD4-209ENST00000511009 OSBPL8Q9BZF1 889 aa4.35□□□□□ -1.71
MBD4-209ENST00000511009 ABCG8Q9H221 673 aa4.35□□□□□ -1.71
MBD4-209ENST00000511009 CUEDC2Q9H467 287 aa4.35□□□□□ -1.71
MBD4-209ENST00000511009 EBF2Q9HAK2 575 aa4.35□□□□□ -1.71
MBD4-209ENST00000511009 A4GALTQ9NPC4 353 aa4.35□□□□□ -1.71
MBD4-209ENST00000511009 ZNF701Q9NV72 531 aaPredicted RBP4.35□□□□□ -1.71
MBD4-209ENST00000511009 HBS1LQ9Y450 684 aaKnown RBP4.35□□□□□ -1.71
MBD4-209ENST00000511009 EVPLQ92817 2033 aa4.34□□□□□ -1.71
MBD4-209ENST00000511009 IGLV5-45A0A087WSX0 123 aa4.34□□□□□ -1.71
MBD4-209ENST00000511009 PRSS46E5RG02 174 aa4.34□□□□□ -1.71
MBD4-209ENST00000511009 PRKRAO75569 313 aaKnown RBP4.34□□□□□ -1.71
MBD4-209ENST00000511009 ZBTB11O95625 1053 aaPredicted RBP4.34□□□□□ -1.71
MBD4-209ENST00000511009 BMP15O95972 392 aa4.34□□□□□ -1.71
MBD4-209ENST00000511009 IGHV4-39P01824 125 aa4.34□□□□□ -1.71
MBD4-209ENST00000511009 SERPING1P05155 500 aa4.34□□□□□ -1.71
MBD4-209ENST00000511009 SSTR1P30872 391 aa4.34□□□□□ -1.71
MBD4-209ENST00000511009 HOXA1P49639 335 aaPredicted RBP4.34□□□□□ -1.71
MBD4-209ENST00000511009 SERPINH1P50454 418 aaKnown RBP4.34□□□□□ -1.71
MBD4-209ENST00000511009 VAMP7P51809 220 aa4.34□□□□□ -1.71
MBD4-209ENST00000511009 PITX1P78337 314 aaPredicted RBP4.34□□□□□ -1.71
MBD4-209ENST00000511009 GFPT1Q06210 699 aaPredicted RBP4.34□□□□□ -1.71
MBD4-209ENST00000511009 IL10RBQ08334 325 aa4.34□□□□□ -1.71
MBD4-209ENST00000511009 TAF13Q15543 124 aa4.34□□□□□ -1.71
MBD4-209ENST00000511009 TTC31Q49AM3 519 aaPredicted RBP4.34□□□□□ -1.71
MBD4-209ENST00000511009 SPDYCQ5MJ68 293 aa4.34□□□□□ -1.71
MBD4-209ENST00000511009 PRAMEF8Q5VWM4 474 aa4.34□□□□□ -1.71
MBD4-209ENST00000511009 CTR9Q6PD62 1173 aa4.34□□□□□ -1.71
MBD4-209ENST00000511009 PRSS55Q6UWB4 352 aaPredicted RBP4.34□□□□□ -1.71
MBD4-209ENST00000511009 C9orf47Q6ZRZ4 202 aa4.34□□□□□ -1.71
MBD4-209ENST00000511009 TUBA1AQ71U36 451 aa4.34□□□□□ -1.71
MBD4-209ENST00000511009 RTN4RL2Q86UN3 420 aa4.34□□□□□ -1.71
MBD4-209ENST00000511009 PLD3Q8IV08 490 aa4.34□□□□□ -1.71
MBD4-209ENST00000511009 OR10Q1Q8NGQ4 319 aa4.34□□□□□ -1.71
MBD4-209ENST00000511009 SMG7Q92540 1137 aaKnown RBP4.34□□□□□ -1.71
MBD4-209ENST00000511009 BCL2L2Q92843 193 aaPredicted RBP4.34□□□□□ -1.71
MBD4-209ENST00000511009 TBC1D31Q96DN5 1066 aa4.34□□□□□ -1.71
MBD4-209ENST00000511009 EEF2KMTQ96G04 330 aa4.34□□□□□ -1.71
MBD4-209ENST00000511009 ZNF583Q96ND8 569 aa4.34□□□□□ -1.71
MBD4-209ENST00000511009 RUNDC3BQ96NL0 473 aa4.34□□□□□ -1.71
MBD4-209ENST00000511009 TMEM237Q96Q45 408 aa4.34□□□□□ -1.71
MBD4-209ENST00000511009 PANX3Q96QZ0 392 aa4.34□□□□□ -1.71
MBD4-209ENST00000511009 C17orf62Q9BQA9 187 aa4.34□□□□□ -1.71
MBD4-209ENST00000511009 TUBA1CQ9BQE3 449 aa4.34□□□□□ -1.71
MBD4-209ENST00000511009 SPXQ9BT56 116 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms