RNA–Protein interactions for RNA: ENST00000510472.1

HMGXB3-203, Transcript of HMG-box containing 3, humanhuman

TSL 2

Gene HMGXB3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-203ENST00000510472 PPP1R3AQ16821 1122 aa11.27□□□□□ -0.61
HMGXB3-203ENST00000510472 LINC00303Q3SY05 128 aa11.27□□□□□ -0.61
HMGXB3-203ENST00000510472 ZC3H12BQ5HYM0 836 aaKnown RBP11.27□□□□□ -0.61
HMGXB3-203ENST00000510472 GRTP1Q5TC63 336 aa11.27□□□□□ -0.61
HMGXB3-203ENST00000510472 ICE2Q659A1 982 aa11.27□□□□□ -0.61
HMGXB3-203ENST00000510472 TLDC1Q6P9B6 456 aa11.27□□□□□ -0.61
HMGXB3-203ENST00000510472 SBSNQ6UWP8 590 aa11.27□□□□□ -0.61
HMGXB3-203ENST00000510472 MBOAT1Q6ZNC8 495 aa11.27□□□□□ -0.61
HMGXB3-203ENST00000510472 RNF44Q7L0R7 432 aa11.27□□□□□ -0.61
HMGXB3-203ENST00000510472 PAQR7Q86WK9 346 aa11.27□□□□□ -0.61
HMGXB3-203ENST00000510472 SYTL1Q8IYJ3 562 aa11.27□□□□□ -0.61
HMGXB3-203ENST00000510472 NKAPQ8N5F7 415 aaKnown RBP11.27□□□□□ -0.61
HMGXB3-203ENST00000510472 PPFIBP2Q8ND30 876 aa11.27□□□□□ -0.61
HMGXB3-203ENST00000510472 KIAA1143Q96AT1 154 aaPredicted RBP11.27□□□□□ -0.61
HMGXB3-203ENST00000510472 GBP5Q96PP8 586 aa11.27□□□□□ -0.61
HMGXB3-203ENST00000510472 UBL7Q96S82 380 aaPredicted RBP11.27□□□□□ -0.61
HMGXB3-203ENST00000510472 RUFY1Q96T51 708 aa11.27□□□□□ -0.61
HMGXB3-203ENST00000510472 RBBP8Q99708 897 aa11.27□□□□□ -0.61
HMGXB3-203ENST00000510472 PLCD4Q9BRC7 762 aa11.27□□□□□ -0.61
HMGXB3-203ENST00000510472 DPH7Q9BTV6 452 aa11.27□□□□□ -0.61
HMGXB3-203ENST00000510472 ACAT2Q9BWD1 397 aa11.27□□□□□ -0.61
HMGXB3-203ENST00000510472 SGPP1Q9BX95 441 aa11.27□□□□□ -0.61
HMGXB3-203ENST00000510472 GPR87Q9BY21 358 aa11.27□□□□□ -0.61
HMGXB3-203ENST00000510472 TSPYL1Q9H0U9 437 aa11.27□□□□□ -0.61
HMGXB3-203ENST00000510472 SYNPO2LQ9H987 977 aa11.27□□□□□ -0.61
HMGXB3-203ENST00000510472 NINJ2Q9NZG7 142 aa11.27□□□□□ -0.61
HMGXB3-203ENST00000510472 ANKMY1Q9P2S6 941 aa11.27□□□□□ -0.61
HMGXB3-203ENST00000510472 NOVA2Q9UNW9 492 aaKnown RBP11.27□□□□□ -0.61
HMGXB3-203ENST00000510472 SPTBP11277 2137 aa11.27□□□□□ -0.61
HMGXB3-203ENST00000510472 LOC105369274A0A096LPK9 316 aa11.26□□□□□ -0.61
HMGXB3-203ENST00000510472 LOC102723532A0A0G2JNH3 316 aa11.26□□□□□ -0.61
HMGXB3-203ENST00000510472 HMX2A2RU54 273 aa11.26□□□□□ -0.61
HMGXB3-203ENST00000510472 ZNF891A8MT65 544 aaPredicted RBP11.26□□□□□ -0.61
HMGXB3-203ENST00000510472 ERVH48-1M5A8F1 160 aa11.26□□□□□ -0.61
HMGXB3-203ENST00000510472 CDC7O00311 574 aa11.26□□□□□ -0.61
HMGXB3-203ENST00000510472 ATXN7O15265 892 aaPredicted RBP11.26□□□□□ -0.61
HMGXB3-203ENST00000510472 ZSCAN9O15535 394 aaPredicted RBP11.26□□□□□ -0.61
HMGXB3-203ENST00000510472 FAM155BO75949 473 aa11.26□□□□□ -0.61
HMGXB3-203ENST00000510472 SYF2O95926 243 aaKnown RBP11.26□□□□□ -0.61
HMGXB3-203ENST00000510472 ITGB2P05107 769 aa11.26□□□□□ -0.61
HMGXB3-203ENST00000510472 KLK3P07288 261 aaPredicted RBP11.26□□□□□ -0.61
HMGXB3-203ENST00000510472 ENO2P09104 434 aaPredicted RBP11.26□□□□□ -0.61
HMGXB3-203ENST00000510472 HBQ1P09105 142 aa11.26□□□□□ -0.61
HMGXB3-203ENST00000510472 RAB40ALP0C0E4 278 aa11.26□□□□□ -0.61
HMGXB3-203ENST00000510472 NPPBP16860 134 aa11.26□□□□□ -0.61
HMGXB3-203ENST00000510472 TCN2P20062 427 aa11.26□□□□□ -0.61
HMGXB3-203ENST00000510472 PTPN4P29074 926 aa11.26□□□□□ -0.61
HMGXB3-203ENST00000510472 CMPK1P30085 196 aa11.26□□□□□ -0.61
HMGXB3-203ENST00000510472 STX2P32856 288 aa11.26□□□□□ -0.61
HMGXB3-203ENST00000510472 RPA3P35244 121 aaPredicted RBP11.26□□□□□ -0.61
HMGXB3-203ENST00000510472 AP1S2P56377 157 aa11.26□□□□□ -0.61
HMGXB3-203ENST00000510472 NAB1Q13506 487 aa11.26□□□□□ -0.61
HMGXB3-203ENST00000510472 DNASE1L3Q13609 305 aa11.26□□□□□ -0.61
HMGXB3-203ENST00000510472 NAA25Q14CX7 972 aa11.26□□□□□ -0.61
HMGXB3-203ENST00000510472 FRMPD2BQ6IN97 320 aa11.26□□□□□ -0.61
HMGXB3-203ENST00000510472 AGTRAPQ6RW13 159 aa11.26□□□□□ -0.61
HMGXB3-203ENST00000510472 GPR135Q8IZ08 494 aa11.26□□□□□ -0.61
HMGXB3-203ENST00000510472 OR4N4Q8N0Y3 316 aa11.26□□□□□ -0.61
HMGXB3-203ENST00000510472 ZNF655Q8N720 491 aaPredicted RBP11.26□□□□□ -0.61
HMGXB3-203ENST00000510472 ZSCAN1Q8NBB4 408 aa11.26□□□□□ -0.61
HMGXB3-203ENST00000510472 LRRN4CLQ8ND94 238 aa11.26□□□□□ -0.61
HMGXB3-203ENST00000510472 OR56A3Q8NH54 315 aa11.26□□□□□ -0.61
HMGXB3-203ENST00000510472 IFT81Q8WYA0 676 aa11.26□□□□□ -0.61
HMGXB3-203ENST00000510472 STARD8Q92502 1023 aa11.26□□□□□ -0.61
HMGXB3-203ENST00000510472 FBXL8Q96CD0 374 aa11.26□□□□□ -0.61
HMGXB3-203ENST00000510472 UBXN10Q96LJ8 280 aa11.26□□□□□ -0.61
HMGXB3-203ENST00000510472 DPH2Q9BQC3 489 aaPredicted RBP11.26□□□□□ -0.61
HMGXB3-203ENST00000510472 CHST8Q9H2A9 424 aa11.26□□□□□ -0.61
HMGXB3-203ENST00000510472 CAB39LQ9H9S4 337 aa11.26□□□□□ -0.61
HMGXB3-203ENST00000510472 MRPS30Q9NP92 439 aaKnown RBP11.26□□□□□ -0.61
HMGXB3-203ENST00000510472 TAC3Q9UHF0 121 aa11.26□□□□□ -0.61
HMGXB3-203ENST00000510472 KCND3Q9UK17 655 aa11.26□□□□□ -0.61
HMGXB3-203ENST00000510472 MRPS18BQ9Y676 258 aaKnown RBP11.26□□□□□ -0.61
HMGXB3-203ENST00000510472 ITGAXP20702 1163 aa11.25□□□□□ -0.61
HMGXB3-203ENST00000510472 SAT1P21673 171 aa11.25□□□□□ -0.61
HMGXB3-203ENST00000510472 SPRP35270 261 aaPredicted RBP11.25□□□□□ -0.61
HMGXB3-203ENST00000510472 NAE1Q13564 534 aa11.25□□□□□ -0.61
HMGXB3-203ENST00000510472 USP10Q14694 798 aaKnown RBP11.25□□□□□ -0.61
HMGXB3-203ENST00000510472 EFTUD2Q15029 972 aaKnown RBP eCLIP11.25□□□□□ -0.619e-7■■■■□ 20.8
HMGXB3-203ENST00000510472 TBR1Q16650 682 aa11.25□□□□□ -0.61
HMGXB3-203ENST00000510472 PRTGQ2VWP7 1150 aa11.25□□□□□ -0.61
HMGXB3-203ENST00000510472 PTCHD3Q3KNS1 767 aa11.25□□□□□ -0.61
HMGXB3-203ENST00000510472 TCTE1Q5JU00 501 aa11.25□□□□□ -0.61
HMGXB3-203ENST00000510472 FAM198BQ6UWH4 519 aa11.25□□□□□ -0.61
HMGXB3-203ENST00000510472 CEP128Q6ZU80 1094 aa11.25□□□□□ -0.61
HMGXB3-203ENST00000510472 CTAGE3PQ8IX95 158 aa11.25□□□□□ -0.61
HMGXB3-203ENST00000510472 ARHGEF39Q8N4T4 335 aa11.25□□□□□ -0.61
HMGXB3-203ENST00000510472 PPM1NQ8N819 430 aa11.25□□□□□ -0.61
HMGXB3-203ENST00000510472 PROKR1Q8TCW9 393 aa11.25□□□□□ -0.61
HMGXB3-203ENST00000510472 MR1Q95460 341 aa11.25□□□□□ -0.61
HMGXB3-203ENST00000510472 CLIP3Q96DZ5 547 aa11.25□□□□□ -0.61
HMGXB3-203ENST00000510472 OR2A5Q96R48 311 aa11.25□□□□□ -0.61
HMGXB3-203ENST00000510472 OR4K3Q96R72 315 aa11.25□□□□□ -0.61
HMGXB3-203ENST00000510472 FMO2Q99518 471 aa11.25□□□□□ -0.61
HMGXB3-203ENST00000510472 ZFYVE21Q9BQ24 234 aa11.25□□□□□ -0.61
HMGXB3-203ENST00000510472 NLNQ9BYT8 704 aa11.25□□□□□ -0.61
HMGXB3-203ENST00000510472 DERL2Q9GZP9 239 aa11.25□□□□□ -0.61
HMGXB3-203ENST00000510472 PCBD2Q9H0N5 130 aa11.25□□□□□ -0.61
HMGXB3-203ENST00000510472 ATG10Q9H0Y0 220 aa11.25□□□□□ -0.61
HMGXB3-203ENST00000510472 ACSS3Q9H6R3 686 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms