RNA–Protein interactions for RNA: ENST00000510173.6

RBM4-208, Transcript of RNA binding motif protein 4, human

TSL 3

Gene RBM4, Length 782 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM4-208	ENST00000510173	HMGCLL1	Q8TB92	370 aa		13.7	□□□□□ -0.22
RBM4-208	ENST00000510173	DGCR8	Q8WYQ5	773 aa	Known RBP eCLIP	13.7	□□□□□ -0.22	3e-6	■■■■■ 50.8
RBM4-208	ENST00000510173	SNRNP40	Q96DI7	357 aa	Known RBP	13.7	□□□□□ -0.22
RBM4-208	ENST00000510173	ZNF778	Q96MU6	729 aa		13.7	□□□□□ -0.22
RBM4-208	ENST00000510173	WDR77	Q9BQA1	342 aa	Predicted RBP	13.7	□□□□□ -0.22
RBM4-208	ENST00000510173	MENT	Q9BUN1	341 aa		13.7	□□□□□ -0.22
RBM4-208	ENST00000510173	SEMA3G	Q9NS98	782 aa		13.7	□□□□□ -0.22
RBM4-208	ENST00000510173	SPATA7	Q9P0W8	599 aa		13.7	□□□□□ -0.22
RBM4-208	ENST00000510173	SNX24	Q9Y343	169 aa		13.7	□□□□□ -0.22
RBM4-208	ENST00000510173	MED13	Q9UHV7	2174 aa		13.7	□□□□□ -0.22
RBM4-208	ENST00000510173	PIKFYVE	Q9Y2I7	2098 aa		13.7	□□□□□ -0.22
RBM4-208	ENST00000510173	TNRC6A	Q8NDV7	1962 aa	Known RBP	13.69	□□□□□ -0.22
RBM4-208	ENST00000510173	UQCRHL	A0A096LP55	91 aa		13.69	□□□□□ -0.22
RBM4-208	ENST00000510173	FITM1	A5D6W6	292 aa		13.69	□□□□□ -0.22
RBM4-208	ENST00000510173	IQCF5	A8MTL0	148 aa		13.69	□□□□□ -0.22
RBM4-208	ENST00000510173	SEMA7A	O75326	666 aa		13.69	□□□□□ -0.22
RBM4-208	ENST00000510173	SEC31A	O94979	1220 aa	Known RBP	13.69	□□□□□ -0.22
RBM4-208	ENST00000510173	UQCRH	P07919	91 aa		13.69	□□□□□ -0.22
RBM4-208	ENST00000510173	TNFRSF8	P28908	595 aa		13.69	□□□□□ -0.22
RBM4-208	ENST00000510173	GRIA1	P42261	906 aa		13.69	□□□□□ -0.22
RBM4-208	ENST00000510173	RPL21	P46778	160 aa	Known RBP	13.69	□□□□□ -0.22
RBM4-208	ENST00000510173	NPY2R	P49146	381 aa		13.69	□□□□□ -0.22
RBM4-208	ENST00000510173	CARS	P49589	748 aa	Known RBP	13.69	□□□□□ -0.22
RBM4-208	ENST00000510173	SESN2	P58004	480 aa	Predicted RBP	13.69	□□□□□ -0.22
RBM4-208	ENST00000510173	MRPL49	Q13405	166 aa	Known RBP	13.69	□□□□□ -0.22
RBM4-208	ENST00000510173	GRB7	Q14451	532 aa		13.69	□□□□□ -0.22
RBM4-208	ENST00000510173	SEMA3A	Q14563	771 aa		13.69	□□□□□ -0.22
RBM4-208	ENST00000510173	RBBP7	Q16576	425 aa		13.69	□□□□□ -0.22
RBM4-208	ENST00000510173	NKG7	Q16617	165 aa		13.69	□□□□□ -0.22
RBM4-208	ENST00000510173	EIF2S3L	Q2VIR3	472 aa	Known RBP	13.69	□□□□□ -0.22
RBM4-208	ENST00000510173	PLEKHN1	Q494U1	663 aa	Predicted RBP	13.69	□□□□□ -0.22
RBM4-208	ENST00000510173	AGAP7P	Q5VUJ5	663 aa		13.69	□□□□□ -0.22
RBM4-208	ENST00000510173	PRMT9	Q6P2P2	845 aa		13.69	□□□□□ -0.22
RBM4-208	ENST00000510173		Q6ZS92	163 aa		13.69	□□□□□ -0.22
RBM4-208	ENST00000510173	SDCCAG8	Q86SQ7	713 aa	Predicted RBP	13.69	□□□□□ -0.22
RBM4-208	ENST00000510173	TAX1BP1	Q86VP1	789 aa		13.69	□□□□□ -0.22
RBM4-208	ENST00000510173	PPIL6	Q8IXY8	311 aa		13.69	□□□□□ -0.22
RBM4-208	ENST00000510173	LKAAEAR1	Q8TD35	194 aa		13.69	□□□□□ -0.22
RBM4-208	ENST00000510173	PPP4R1	Q8TF05	950 aa		13.69	□□□□□ -0.22
RBM4-208	ENST00000510173	IFT81	Q8WYA0	676 aa		13.69	□□□□□ -0.22
RBM4-208	ENST00000510173	ZNF285	Q96NJ3	590 aa		13.69	□□□□□ -0.22
RBM4-208	ENST00000510173	AGAP4	Q96P64	663 aa		13.69	□□□□□ -0.22
RBM4-208	ENST00000510173	IL17F	Q96PD4	163 aa		13.69	□□□□□ -0.22
RBM4-208	ENST00000510173	EPS8L2	Q9H6S3	715 aa		13.69	□□□□□ -0.22
RBM4-208	ENST00000510173	CHRAC1	Q9NRG0	131 aa		13.69	□□□□□ -0.22
RBM4-208	ENST00000510173	TREX1	Q9NSU2	369 aa		13.69	□□□□□ -0.22
RBM4-208	ENST00000510173	MTRF1L	Q9UGC7	380 aa	Known RBP	13.69	□□□□□ -0.22
RBM4-208	ENST00000510173	FBXL4	Q9UKA2	621 aa		13.69	□□□□□ -0.22
RBM4-208	ENST00000510173	KLK4	Q9Y5K2	254 aa		13.69	□□□□□ -0.22
RBM4-208	ENST00000510173	COPG1	Q9Y678	874 aa	Known RBP	13.69	□□□□□ -0.22
RBM4-208	ENST00000510173	ESPL1	Q14674	2120 aa		13.69	□□□□□ -0.22
RBM4-208	ENST00000510173	NOTCH2	Q04721	2471 aa		13.68	□□□□□ -0.22
RBM4-208	ENST00000510173	ESYT3	A0FGR9	886 aa		13.68	□□□□□ -0.22
RBM4-208	ENST00000510173	ANKUB1	A6NFN9	424 aa		13.68	□□□□□ -0.22
RBM4-208	ENST00000510173	PRPF4	O43172	522 aa	Known RBP eCLIP	13.68	□□□□□ -0.22
RBM4-208	ENST00000510173	CNOT3	O75175	753 aa	Known RBP	13.68	□□□□□ -0.22
RBM4-208	ENST00000510173	ERLIN1	O75477	346 aa		13.68	□□□□□ -0.22
RBM4-208	ENST00000510173	CTSB	P07858	339 aa		13.68	□□□□□ -0.22
RBM4-208	ENST00000510173	ERVK-10	P10266	1014 aa		13.68	□□□□□ -0.22
RBM4-208	ENST00000510173	IVD	P26440	423 aa		13.68	□□□□□ -0.22
RBM4-208	ENST00000510173	ATP5D	P30049	168 aa		13.68	□□□□□ -0.22
RBM4-208	ENST00000510173	SARNP	P82979	210 aa	Known RBP	13.68	□□□□□ -0.22
RBM4-208	ENST00000510173	CDK16	Q00536	496 aa		13.68	□□□□□ -0.22
RBM4-208	ENST00000510173	OCA2	Q04671	838 aa		13.68	□□□□□ -0.22
RBM4-208	ENST00000510173	MORF4L2	Q15014	288 aa		13.68	□□□□□ -0.22
RBM4-208	ENST00000510173	NR6A1	Q15406	480 aa		13.68	□□□□□ -0.22
RBM4-208	ENST00000510173	TUBB8	Q3ZCM7	444 aa		13.68	□□□□□ -0.22
RBM4-208	ENST00000510173	FCRL6	Q6DN72	434 aa		13.68	□□□□□ -0.22
RBM4-208	ENST00000510173	CEP128	Q6ZU80	1094 aa		13.68	□□□□□ -0.22
RBM4-208	ENST00000510173	PRUNE1	Q86TP1	453 aa		13.68	□□□□□ -0.22
RBM4-208	ENST00000510173	FAM20C	Q8IXL6	584 aa		13.68	□□□□□ -0.22
RBM4-208	ENST00000510173	KRT222	Q8N1A0	295 aa		13.68	□□□□□ -0.22
RBM4-208	ENST00000510173	CISD2	Q8N5K1	135 aa	Known RBP	13.68	□□□□□ -0.22
RBM4-208	ENST00000510173	C2orf73	Q8N5S3	287 aa	Predicted RBP	13.68	□□□□□ -0.22
RBM4-208	ENST00000510173	C5orf34	Q96MH7	638 aa		13.68	□□□□□ -0.22
RBM4-208	ENST00000510173	TCF12	Q99081	682 aa		13.68	□□□□□ -0.22
RBM4-208	ENST00000510173	SPSB2	Q99619	263 aa		13.68	□□□□□ -0.22
RBM4-208	ENST00000510173	PARD6B	Q9BYG5	372 aa		13.68	□□□□□ -0.22
RBM4-208	ENST00000510173	TSPYL1	Q9H0U9	437 aa		13.68	□□□□□ -0.22
RBM4-208	ENST00000510173	P2RY12	Q9H244	342 aa		13.68	□□□□□ -0.22
RBM4-208	ENST00000510173	SLC6A20	Q9NP91	592 aa		13.68	□□□□□ -0.22
RBM4-208	ENST00000510173	SLC22A11	Q9NSA0	550 aa		13.68	□□□□□ -0.22
RBM4-208	ENST00000510173	ASF1B	Q9NVP2	202 aa		13.68	□□□□□ -0.22
RBM4-208	ENST00000510173	ARGLU1	Q9NWB6	273 aa	Predicted RBP	13.68	□□□□□ -0.22
RBM4-208	ENST00000510173	UTP6	Q9NYH9	597 aa	Known RBP	13.68	□□□□□ -0.22
RBM4-208	ENST00000510173	SLC5A6	Q9Y289	635 aa		13.68	□□□□□ -0.22
RBM4-208	ENST00000510173	VPS9D1	Q9Y2B5	631 aa		13.68	□□□□□ -0.22
RBM4-208	ENST00000510173	KLHL20	Q9Y2M5	609 aa		13.68	□□□□□ -0.22
RBM4-208	ENST00000510173	PCDHGA10	Q9Y5H3	936 aa		13.68	□□□□□ -0.22
RBM4-208	ENST00000510173	ZNF839	A8K0R7	811 aa		13.67	□□□□□ -0.22
RBM4-208	ENST00000510173	VPS26A	O75436	327 aa		13.67	□□□□□ -0.22
RBM4-208	ENST00000510173	CBX6	O95503	412 aa		13.67	□□□□□ -0.22
RBM4-208	ENST00000510173	C1orf105	O95561	183 aa		13.67	□□□□□ -0.22
RBM4-208	ENST00000510173	ESR1	P03372	595 aa		13.67	□□□□□ -0.22
RBM4-208	ENST00000510173	PAM	P19021	973 aa		13.67	□□□□□ -0.22
RBM4-208	ENST00000510173	GRIA3	P42263	894 aa		13.67	□□□□□ -0.22
RBM4-208	ENST00000510173	ITGA8	P53708	1063 aa		13.67	□□□□□ -0.22
RBM4-208	ENST00000510173	PLTP	P55058	493 aa		13.67	□□□□□ -0.22
RBM4-208	ENST00000510173	EIF3B	P55884	814 aa	Known RBP	13.67	□□□□□ -0.22
RBM4-208	ENST00000510173	NAA30	Q147X3	362 aa	Predicted RBP	13.67	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 18 ms