RNA–Protein interactions for RNA: ENST00000509876.5

PHF3-210, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 7,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-210ENST00000509876 EBPLQ9BY08 206 aa4.98□□□□□ -1.61
PHF3-210ENST00000509876 REXO4Q9GZR2 422 aaKnown RBP4.98□□□□□ -1.61
PHF3-210ENST00000509876 PELI2Q9HAT8 420 aa4.98□□□□□ -1.61
PHF3-210ENST00000509876 PRTFDC1Q9NRG1 225 aa4.98□□□□□ -1.61
PHF3-210ENST00000509876 PLXNA1Q9UIW2 1896 aa4.98□□□□□ -1.61
PHF3-210ENST00000509876 CCT8L1PA6NM43 557 aa4.98□□□□□ -1.61
PHF3-210ENST00000509876 EFCAB7A8K855 629 aa4.98□□□□□ -1.61
PHF3-210ENST00000509876 TCEA3O75764 348 aa4.98□□□□□ -1.61
PHF3-210ENST00000509876 PDHA1P08559 390 aa4.98□□□□□ -1.61
PHF3-210ENST00000509876 EBLN1P0CF75 366 aa4.98□□□□□ -1.61
PHF3-210ENST00000509876 IGFBP6P24592 240 aaPredicted RBP4.98□□□□□ -1.61
PHF3-210ENST00000509876 PSMA3P25788 255 aa4.98□□□□□ -1.61
PHF3-210ENST00000509876 ITGA3P26006 1051 aa4.98□□□□□ -1.61
PHF3-210ENST00000509876 MMP12P39900 470 aa4.98□□□□□ -1.61
PHF3-210ENST00000509876 DCDC1P59894 354 aa4.98□□□□□ -1.61
PHF3-210ENST00000509876 PTCHD3Q3KNS1 767 aa4.98□□□□□ -1.61
PHF3-210ENST00000509876 SAMD4BQ5PRF9 694 aaKnown RBP4.98□□□□□ -1.61
PHF3-210ENST00000509876 LIPJQ5W064 366 aa4.98□□□□□ -1.61
PHF3-210ENST00000509876 SUSD1Q6UWL2 747 aa4.98□□□□□ -1.61
PHF3-210ENST00000509876 COX18Q8N8Q8 333 aa4.98□□□□□ -1.61
PHF3-210ENST00000509876 AGBL5Q8NDL9 886 aa4.98□□□□□ -1.61
PHF3-210ENST00000509876 GPR26Q8NDV2 337 aa4.98□□□□□ -1.61
PHF3-210ENST00000509876 GPR150Q8NGU9 434 aa4.98□□□□□ -1.61
PHF3-210ENST00000509876 ZHX1-C8orf76Q96EF9 292 aa4.98□□□□□ -1.61
PHF3-210ENST00000509876 CCDC28BQ9BUN5 200 aa4.98□□□□□ -1.61
PHF3-210ENST00000509876 MTMR10Q9NXD2 777 aa4.98□□□□□ -1.61
PHF3-210ENST00000509876 IL17CQ9P0M4 197 aa4.98□□□□□ -1.61
PHF3-210ENST00000509876 TMED5Q9Y3A6 229 aa4.98□□□□□ -1.61
PHF3-210ENST00000509876 TIMM22Q9Y584 194 aa4.98□□□□□ -1.61
PHF3-210ENST00000509876 TCHHQ07283 1943 aa4.98□□□□□ -1.61
PHF3-210ENST00000509876 PRRT4C9JH25 899 aa4.98□□□□□ -1.61
PHF3-210ENST00000509876 TNFRSF10CO14798 259 aa4.98□□□□□ -1.61
PHF3-210ENST00000509876 B4GALT2O60909 372 aa4.98□□□□□ -1.61
PHF3-210ENST00000509876 SERPINI2O75830 405 aa4.98□□□□□ -1.61
PHF3-210ENST00000509876 ALOX5P09917 674 aa4.98□□□□□ -1.61
PHF3-210ENST00000509876 ME2P23368 584 aa4.98□□□□□ -1.61
PHF3-210ENST00000509876 HOXC12P31275 282 aa4.98□□□□□ -1.61
PHF3-210ENST00000509876 IRAK1P51617 712 aa4.98□□□□□ -1.61
PHF3-210ENST00000509876 INHBCP55103 352 aa4.98□□□□□ -1.61
PHF3-210ENST00000509876 ITGA1P56199 1179 aa4.98□□□□□ -1.61
PHF3-210ENST00000509876 HSPB3Q12988 150 aa4.98□□□□□ -1.61
PHF3-210ENST00000509876 ANGPT1Q15389 498 aa4.98□□□□□ -1.61
PHF3-210ENST00000509876 DPY19L1Q2PZI1 675 aa4.98□□□□□ -1.61
PHF3-210ENST00000509876 RBM20Q5T481 1227 aaKnown RBP4.98□□□□□ -1.61
PHF3-210ENST00000509876 FIGLAQ6QHK4 219 aa4.98□□□□□ -1.61
PHF3-210ENST00000509876 CEACAM20Q6UY09 585 aa4.98□□□□□ -1.61
PHF3-210ENST00000509876 NEK10Q6ZWH5 1172 aa4.98□□□□□ -1.61
PHF3-210ENST00000509876 SNX32Q86XE0 403 aa4.98□□□□□ -1.61
PHF3-210ENST00000509876 GATAD2AQ86YP4 633 aa4.98□□□□□ -1.61
PHF3-210ENST00000509876 MRGPRX1Q96LB2 322 aa4.98□□□□□ -1.61
PHF3-210ENST00000509876 MTERF1Q99551 399 aaKnown RBP4.98□□□□□ -1.61
PHF3-210ENST00000509876 PIF1Q9H611 641 aa4.98□□□□□ -1.61
PHF3-210ENST00000509876 IL26Q9NPH9 171 aa4.98□□□□□ -1.61
PHF3-210ENST00000509876 ACTR10Q9NZ32 417 aa4.98□□□□□ -1.61
PHF3-210ENST00000509876 SPO11Q9Y5K1 396 aa4.98□□□□□ -1.61
PHF3-210ENST00000509876 LOC285095A0A1B0GVY8 99 aa4.98□□□□□ -1.61
PHF3-210ENST00000509876 A8MUI8 341 aa4.98□□□□□ -1.61
PHF3-210ENST00000509876 CDC7O00311 574 aa4.98□□□□□ -1.61
PHF3-210ENST00000509876 SAP18O00422 153 aaKnown RBP4.98□□□□□ -1.61
PHF3-210ENST00000509876 TGFB1P01137 390 aa4.98□□□□□ -1.61
PHF3-210ENST00000509876 SLC6A2P23975 617 aa4.98□□□□□ -1.61
PHF3-210ENST00000509876 MPSTP25325 297 aa4.98□□□□□ -1.61
PHF3-210ENST00000509876 BNC1Q01954 994 aa4.98□□□□□ -1.61
PHF3-210ENST00000509876 TUBB3Q13509 450 aa4.98□□□□□ -1.61
PHF3-210ENST00000509876 NR1D2Q14995 579 aa4.98□□□□□ -1.61
PHF3-210ENST00000509876 HKDC1Q2TB90 917 aa4.98□□□□□ -1.61
PHF3-210ENST00000509876 TSSK4Q6SA08 328 aa4.98□□□□□ -1.61
PHF3-210ENST00000509876 RBM44Q6ZP01 1051 aaKnown RBP4.98□□□□□ -1.61
PHF3-210ENST00000509876 ADIPOR2Q86V24 386 aa4.98□□□□□ -1.61
PHF3-210ENST00000509876 TP53INP2Q8IXH6 220 aa4.98□□□□□ -1.61
PHF3-210ENST00000509876 TEX26Q8N6G2 289 aa4.98□□□□□ -1.61
PHF3-210ENST00000509876 LRRN4CLQ8ND94 238 aa4.98□□□□□ -1.61
PHF3-210ENST00000509876 SLC35G5Q96KT7 338 aa4.98□□□□□ -1.61
PHF3-210ENST00000509876 SIGLEC10Q96LC7 697 aa4.98□□□□□ -1.61
PHF3-210ENST00000509876 TMEM109Q9BVC6 243 aa4.98□□□□□ -1.61
PHF3-210ENST00000509876 THUMPD1Q9NXG2 353 aaKnown RBP4.98□□□□□ -1.61
PHF3-210ENST00000509876 SLC17A7Q9P2U7 560 aa4.98□□□□□ -1.61
PHF3-210ENST00000509876 PISDQ9UG56 409 aa4.98□□□□□ -1.61
PHF3-210ENST00000509876 KLF15Q9UIH9 416 aa4.98□□□□□ -1.61
PHF3-210ENST00000509876 FBXO4Q9UKT5 387 aa4.98□□□□□ -1.61
PHF3-210ENST00000509876 PARP14Q460N5 1801 aa4.98□□□□□ -1.61
PHF3-210ENST00000509876 H7BY64 318 aa4.97□□□□□ -1.61
PHF3-210ENST00000509876 FCHO1O14526 889 aa4.97□□□□□ -1.61
PHF3-210ENST00000509876 PLIN3O60664 434 aa4.97□□□□□ -1.61
PHF3-210ENST00000509876 SCN2BO60939 215 aa4.97□□□□□ -1.61
PHF3-210ENST00000509876 C1GALT1C1LP0DN25 315 aa4.97□□□□□ -1.61
PHF3-210ENST00000509876 OTX2P32243 289 aa4.97□□□□□ -1.61
PHF3-210ENST00000509876 KCNC1P48547 511 aa4.97□□□□□ -1.61
PHF3-210ENST00000509876 POLR2JP52435 117 aaKnown RBP4.97□□□□□ -1.61
PHF3-210ENST00000509876 ZNF140P52738 457 aaPredicted RBP4.97□□□□□ -1.61
PHF3-210ENST00000509876 MTTPP55157 894 aa4.97□□□□□ -1.61
PHF3-210ENST00000509876 OR4D2P58180 307 aa4.97□□□□□ -1.61
PHF3-210ENST00000509876 TBPL1P62380 186 aa4.97□□□□□ -1.61
PHF3-210ENST00000509876 TBL3Q12788 808 aaKnown RBP4.97□□□□□ -1.61
PHF3-210ENST00000509876 FGD3Q5JSP0 725 aa4.97□□□□□ -1.61
PHF3-210ENST00000509876 GCNT6Q5T4J0 391 aa4.97□□□□□ -1.61
PHF3-210ENST00000509876 RANBP10Q6VN20 620 aa4.97□□□□□ -1.61
PHF3-210ENST00000509876 METTL27Q8N6F8 245 aaPredicted RBP4.97□□□□□ -1.61
PHF3-210ENST00000509876 POMGNT2Q8NAT1 580 aa4.97□□□□□ -1.61
PHF3-210ENST00000509876 PLA2G15Q8NCC3 412 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms