RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 ZNF358Q9NW07 568 aa8.43□□□□□ -1.06
PDLIM5-213ENST00000509357 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.43□□□□□ -1.06
PDLIM5-213ENST00000509357 SH2B3Q9UQQ2 575 aa8.43□□□□□ -1.06
PDLIM5-213ENST00000509357 BTRCQ9Y297 605 aa8.43□□□□□ -1.06
PDLIM5-213ENST00000509357 VPS9D1Q9Y2B5 631 aa8.43□□□□□ -1.06
PDLIM5-213ENST00000509357 SDK2Q58EX2 2172 aa8.43□□□□□ -1.06
PDLIM5-213ENST00000509357 PIEZO2Q9H5I5 2752 aa8.43□□□□□ -1.06
PDLIM5-213ENST00000509357 MDC1Q14676 2089 aaKnown RBP8.42□□□□□ -1.06
PDLIM5-213ENST00000509357 FASNP49327 2511 aaKnown RBP8.42□□□□□ -1.06
PDLIM5-213ENST00000509357 A0A0J9YY10 115 aa8.42□□□□□ -1.06
PDLIM5-213ENST00000509357 B8ZZF3 427 aa8.42□□□□□ -1.06
PDLIM5-213ENST00000509357 C21orf140B9A014 251 aa8.42□□□□□ -1.06
PDLIM5-213ENST00000509357 POC1B-GALNT4F8VUJ3 575 aa8.42□□□□□ -1.06
PDLIM5-213ENST00000509357 SLC28A2O43868 658 aa8.42□□□□□ -1.06
PDLIM5-213ENST00000509357 ERGP11308 486 aa8.42□□□□□ -1.06
PDLIM5-213ENST00000509357 F8A1P23610 371 aa8.42□□□□□ -1.06
PDLIM5-213ENST00000509357 PSMB5P28074 263 aa8.42□□□□□ -1.06
PDLIM5-213ENST00000509357 OAS2P29728 719 aaKnown RBP8.42□□□□□ -1.06
PDLIM5-213ENST00000509357 ATP5DP30049 168 aa8.42□□□□□ -1.06
PDLIM5-213ENST00000509357 PKLRP30613 574 aa8.42□□□□□ -1.06
PDLIM5-213ENST00000509357 RAB28P51157 221 aa8.42□□□□□ -1.06
PDLIM5-213ENST00000509357 ITGA1P56199 1179 aa8.42□□□□□ -1.06
PDLIM5-213ENST00000509357 POLE2P56282 527 aa8.42□□□□□ -1.06
PDLIM5-213ENST00000509357 SNRPNP63162 240 aaKnown RBP8.42□□□□□ -1.06
PDLIM5-213ENST00000509357 KCNAB2Q13303 367 aa8.42□□□□□ -1.06
PDLIM5-213ENST00000509357 OR4D1Q15615 310 aa8.42□□□□□ -1.06
PDLIM5-213ENST00000509357 ZIC1Q15915 447 aa8.42□□□□□ -1.06
PDLIM5-213ENST00000509357 C18orf21Q32NC0 220 aaPredicted RBP8.42□□□□□ -1.06
PDLIM5-213ENST00000509357 MROH9Q5TGP6 573 aa8.42□□□□□ -1.06
PDLIM5-213ENST00000509357 PRAMEF17Q5VTA0 474 aa8.42□□□□□ -1.06
PDLIM5-213ENST00000509357 SH2D5Q6ZV89 423 aa8.42□□□□□ -1.06
PDLIM5-213ENST00000509357 TRMT10CQ7L0Y3 403 aaKnown RBP8.42□□□□□ -1.06
PDLIM5-213ENST00000509357 TAX1BP1Q86VP1 789 aa8.42□□□□□ -1.06
PDLIM5-213ENST00000509357 DCUN1D3Q8IWE4 304 aa8.42□□□□□ -1.06
PDLIM5-213ENST00000509357 C19orf47Q8N9M1 422 aaKnown RBP8.42□□□□□ -1.06
PDLIM5-213ENST00000509357 PPFIBP2Q8ND30 876 aa8.42□□□□□ -1.06
PDLIM5-213ENST00000509357 OR1L3Q8NH93 324 aa8.42□□□□□ -1.06
PDLIM5-213ENST00000509357 MAGEC3Q8TD91 643 aa8.42□□□□□ -1.06
PDLIM5-213ENST00000509357 EPS8L3Q8TE67 593 aaKnown RBP8.42□□□□□ -1.06
PDLIM5-213ENST00000509357 APOBEC4Q8WW27 367 aaKnown RBP8.42□□□□□ -1.06
PDLIM5-213ENST00000509357 ASB11Q8WXH4 323 aa8.42□□□□□ -1.06
PDLIM5-213ENST00000509357 CAVIN3Q969G5 261 aa8.42□□□□□ -1.06
PDLIM5-213ENST00000509357 SLC22A18Q96BI1 424 aa8.42□□□□□ -1.06
PDLIM5-213ENST00000509357 TCTN2Q96GX1 697 aa8.42□□□□□ -1.06
PDLIM5-213ENST00000509357 UBXN10Q96LJ8 280 aa8.42□□□□□ -1.06
PDLIM5-213ENST00000509357 GPR78Q96P69 363 aa8.42□□□□□ -1.06
PDLIM5-213ENST00000509357 PKP4Q99569 1192 aa8.42□□□□□ -1.06
PDLIM5-213ENST00000509357 GPR87Q9BY21 358 aa8.42□□□□□ -1.06
PDLIM5-213ENST00000509357 PITPNM3Q9BZ71 974 aa8.42□□□□□ -1.06
PDLIM5-213ENST00000509357 ACTR5Q9H9F9 607 aaPredicted RBP8.42□□□□□ -1.06
PDLIM5-213ENST00000509357 GEMIN8Q9NWZ8 242 aaKnown RBP8.42□□□□□ -1.06
PDLIM5-213ENST00000509357 KLHL42Q9P2K6 505 aa8.42□□□□□ -1.06
PDLIM5-213ENST00000509357 CORO1CQ9ULV4 474 aaPredicted RBP8.42□□□□□ -1.06
PDLIM5-213ENST00000509357 PDE10AQ9Y233 779 aa8.42□□□□□ -1.06
PDLIM5-213ENST00000509357 ASB1Q9Y576 335 aa8.42□□□□□ -1.06
PDLIM5-213ENST00000509357 COMMD10Q9Y6G5 202 aa8.42□□□□□ -1.06
PDLIM5-213ENST00000509357 SPTBP11277 2137 aa8.42□□□□□ -1.06
PDLIM5-213ENST00000509357 BSNQ9UPA5 3926 aa8.41□□□□□ -1.06
PDLIM5-213ENST00000509357 A0A087WUV0 522 aaPredicted RBP8.41□□□□□ -1.06
PDLIM5-213ENST00000509357 IGKV1-8A0A0C4DH67 115 aa8.41□□□□□ -1.06
PDLIM5-213ENST00000509357 NPEPPSL1A6NEC2 478 aa8.41□□□□□ -1.06
PDLIM5-213ENST00000509357 MYO1CO00159 1063 aa8.41□□□□□ -1.06
PDLIM5-213ENST00000509357 MEN1O00255 615 aa8.41□□□□□ -1.06
PDLIM5-213ENST00000509357 CTIFO43310 598 aaKnown RBP8.41□□□□□ -1.06
PDLIM5-213ENST00000509357 ZNF749O43361 778 aa8.41□□□□□ -1.06
PDLIM5-213ENST00000509357 ZBTB14O43829 449 aa8.41□□□□□ -1.06
PDLIM5-213ENST00000509357 VPS26AO75436 327 aa8.41□□□□□ -1.06
PDLIM5-213ENST00000509357 CREG1O75629 220 aa8.41□□□□□ -1.06
PDLIM5-213ENST00000509357 RFPL1O75677 317 aa8.41□□□□□ -1.06
PDLIM5-213ENST00000509357 OR2B3O76000 313 aa8.41□□□□□ -1.06
PDLIM5-213ENST00000509357 HBQ1P09105 142 aa8.41□□□□□ -1.06
PDLIM5-213ENST00000509357 SBK3P0C264 359 aa8.41□□□□□ -1.06
PDLIM5-213ENST00000509357 MPC1LP0DKB6 136 aa8.41□□□□□ -1.06
PDLIM5-213ENST00000509357 CD1DP15813 335 aa8.41□□□□□ -1.06
PDLIM5-213ENST00000509357 AGXTP21549 392 aa8.41□□□□□ -1.06
PDLIM5-213ENST00000509357 IMPA1P29218 277 aa8.41□□□□□ -1.06
PDLIM5-213ENST00000509357 CCNFP41002 786 aa8.41□□□□□ -1.06
PDLIM5-213ENST00000509357 SKIV2L2P42285 1042 aaKnown RBP8.41□□□□□ -1.06
PDLIM5-213ENST00000509357 GPS2Q13227 327 aa8.41□□□□□ -1.06
PDLIM5-213ENST00000509357 TSTA3Q13630 321 aaPredicted RBP8.41□□□□□ -1.06
PDLIM5-213ENST00000509357 KIR2DS3Q14952 304 aa8.41□□□□□ -1.06
PDLIM5-213ENST00000509357 SLMAPQ14BN4 828 aa8.41□□□□□ -1.06
PDLIM5-213ENST00000509357 SF1Q15637 639 aaKnown RBP8.41□□□□□ -1.06
PDLIM5-213ENST00000509357 DEFB110Q30KQ9 67 aa8.41□□□□□ -1.06
PDLIM5-213ENST00000509357 GRTP1Q5TC63 336 aa8.41□□□□□ -1.06
PDLIM5-213ENST00000509357 ADGRD1Q6QNK2 874 aa8.41□□□□□ -1.06
PDLIM5-213ENST00000509357 CDHR3Q6ZTQ4 885 aa8.41□□□□□ -1.06
PDLIM5-213ENST00000509357 NEK10Q6ZWH5 1172 aa8.41□□□□□ -1.06
PDLIM5-213ENST00000509357 TMEM151AQ8N4L1 468 aa8.41□□□□□ -1.06
PDLIM5-213ENST00000509357 GABPB2Q8TAK5 448 aaPredicted RBP8.41□□□□□ -1.06
PDLIM5-213ENST00000509357 RAD51AP1Q96B01 352 aa8.41□□□□□ -1.06
PDLIM5-213ENST00000509357 OR2A14Q96R47 310 aa8.41□□□□□ -1.06
PDLIM5-213ENST00000509357 CYTH2Q99418 400 aa8.41□□□□□ -1.06
PDLIM5-213ENST00000509357 RAB11FIP5Q9BXF6 653 aa8.41□□□□□ -1.06
PDLIM5-213ENST00000509357 SLC25A18Q9H1K4 315 aa8.41□□□□□ -1.06
PDLIM5-213ENST00000509357 CHST8Q9H2A9 424 aa8.41□□□□□ -1.06
PDLIM5-213ENST00000509357 ADNPQ9H2P0 1102 aa8.41□□□□□ -1.06
PDLIM5-213ENST00000509357 ACTL8Q9H568 366 aa8.41□□□□□ -1.06
PDLIM5-213ENST00000509357 SNX15Q9NRS6 342 aa8.41□□□□□ -1.06
PDLIM5-213ENST00000509357 INTS7Q9NVH2 962 aaKnown RBP8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms