RNA–Protein interactions for RNA: ENST00000508635.5

UBE2D3-226, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 587 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-226ENST00000508635 FLRT2O43155 660 aa3.5□□□□□ -1.85
UBE2D3-226ENST00000508635 CTIFO43310 598 aaKnown RBP3.5□□□□□ -1.85
UBE2D3-226ENST00000508635 DHHO43323 396 aa3.5□□□□□ -1.85
UBE2D3-226ENST00000508635 DFNA5O60443 496 aa3.5□□□□□ -1.85
UBE2D3-226ENST00000508635 PEX14O75381 377 aa3.5□□□□□ -1.85
UBE2D3-226ENST00000508635 ZMPSTE24O75844 475 aa3.5□□□□□ -1.85
UBE2D3-226ENST00000508635 RNF8O76064 485 aa3.5□□□□□ -1.85
UBE2D3-226ENST00000508635 LCA5LO95447 670 aa3.5□□□□□ -1.85
UBE2D3-226ENST00000508635 CYP1A2P05177 515 aa3.5□□□□□ -1.85
UBE2D3-226ENST00000508635 TPM3P06753 285 aa3.5□□□□□ -1.85
UBE2D3-226ENST00000508635 ANXA6P08133 673 aa3.5□□□□□ -1.85
UBE2D3-226ENST00000508635 PLEKP08567 350 aaPredicted RBP3.5□□□□□ -1.85
UBE2D3-226ENST00000508635 ITGA5P08648 1049 aa3.5□□□□□ -1.85
UBE2D3-226ENST00000508635 TBC1D3HP0C7X1 549 aa3.5□□□□□ -1.85
UBE2D3-226ENST00000508635 FAM228BP0C875 321 aa3.5□□□□□ -1.85
UBE2D3-226ENST00000508635 NPPBP16860 134 aa3.5□□□□□ -1.85
UBE2D3-226ENST00000508635 RRM1P23921 792 aa3.5□□□□□ -1.85
UBE2D3-226ENST00000508635 CERS1P27544 350 aa3.5□□□□□ -1.85
UBE2D3-226ENST00000508635 SDC4P31431 198 aa3.5□□□□□ -1.85
UBE2D3-226ENST00000508635 CASP14P31944 242 aa3.5□□□□□ -1.85
UBE2D3-226ENST00000508635 NUDT1P36639 197 aa3.5□□□□□ -1.85
UBE2D3-226ENST00000508635 NSFP46459 744 aaKnown RBP3.5□□□□□ -1.85
UBE2D3-226ENST00000508635 SERPINH1P50454 418 aaKnown RBP3.5□□□□□ -1.85
UBE2D3-226ENST00000508635 ZNF75DP51815 510 aa3.5□□□□□ -1.85
UBE2D3-226ENST00000508635 ALDH18A1P54886 795 aaKnown RBP3.5□□□□□ -1.85
UBE2D3-226ENST00000508635 HDAC4P56524 1084 aa3.5□□□□□ -1.85
UBE2D3-226ENST00000508635 C21orf59P57076 290 aa3.5□□□□□ -1.85
UBE2D3-226ENST00000508635 TAS2R38P59533 333 aa3.5□□□□□ -1.85
UBE2D3-226ENST00000508635 YPEL5P62699 121 aa3.5□□□□□ -1.85
UBE2D3-226ENST00000508635 ARF5P84085 180 aa3.5□□□□□ -1.85
UBE2D3-226ENST00000508635 IL9RQ01113 521 aa3.5□□□□□ -1.85
UBE2D3-226ENST00000508635 GNA12Q03113 381 aa3.5□□□□□ -1.85
UBE2D3-226ENST00000508635 KLHL30Q0D2K2 578 aa3.5□□□□□ -1.85
UBE2D3-226ENST00000508635 FOXF2Q12947 444 aa3.5□□□□□ -1.85
UBE2D3-226ENST00000508635 TRIM14Q14142 442 aa3.5□□□□□ -1.85
UBE2D3-226ENST00000508635 SPARCL1Q14515 664 aa3.5□□□□□ -1.85
UBE2D3-226ENST00000508635 SHBQ15464 509 aa3.5□□□□□ -1.85
UBE2D3-226ENST00000508635 CNGA3Q16281 694 aa3.5□□□□□ -1.85
UBE2D3-226ENST00000508635 ASIC2Q16515 512 aa3.5□□□□□ -1.85
UBE2D3-226ENST00000508635 PFKFB4Q16877 469 aa3.5□□□□□ -1.85
UBE2D3-226ENST00000508635 CDO1Q16878 200 aa3.5□□□□□ -1.85
UBE2D3-226ENST00000508635 C15orf59Q2T9L4 293 aaPredicted RBP3.5□□□□□ -1.85
UBE2D3-226ENST00000508635 POM121L1PQ3SYA9 428 aa3.5□□□□□ -1.85
UBE2D3-226ENST00000508635 C4orf46Q504U0 113 aa3.5□□□□□ -1.85
UBE2D3-226ENST00000508635 SLC45A4Q5BKX6 768 aa3.5□□□□□ -1.85
UBE2D3-226ENST00000508635 MTX3Q5HYI7 312 aa3.5□□□□□ -1.85
UBE2D3-226ENST00000508635 PIP5KL1Q5T9C9 394 aa3.5□□□□□ -1.85
UBE2D3-226ENST00000508635 FAM72AQ5TYM5 149 aa3.5□□□□□ -1.85
UBE2D3-226ENST00000508635 TBC1D3GQ6DHY5 549 aa3.5□□□□□ -1.85
UBE2D3-226ENST00000508635 TBC1D3CQ6IPX1 549 aa3.5□□□□□ -1.85
UBE2D3-226ENST00000508635 NAPEPLDQ6IQ20 393 aa3.5□□□□□ -1.85
UBE2D3-226ENST00000508635 FAM72DQ6L9T8 149 aa3.5□□□□□ -1.85
UBE2D3-226ENST00000508635 C16orf89Q6UX73 402 aa3.5□□□□□ -1.85
UBE2D3-226ENST00000508635 STRADAQ7RTN6 431 aa3.5□□□□□ -1.85
UBE2D3-226ENST00000508635 PRPF39Q86UA1 669 aaKnown RBP3.5□□□□□ -1.85
UBE2D3-226ENST00000508635 GLCCI1Q86VQ1 547 aa3.5□□□□□ -1.85
UBE2D3-226ENST00000508635 NLRP14Q86W24 1093 aa3.5□□□□□ -1.85
UBE2D3-226ENST00000508635 TRIM69Q86WT6 500 aa3.5□□□□□ -1.85
UBE2D3-226ENST00000508635 FAM72BQ86X60 149 aa3.5□□□□□ -1.85
UBE2D3-226ENST00000508635 SRRM1Q8IYB3 904 aaKnown RBP3.5□□□□□ -1.85
UBE2D3-226ENST00000508635 TBC1D3Q8IZP1 549 aaPredicted RBP3.5□□□□□ -1.85
UBE2D3-226ENST00000508635 CHCHD4Q8N4Q1 142 aa3.5□□□□□ -1.85
UBE2D3-226ENST00000508635 ARFGAP1Q8N6T3 406 aa3.5□□□□□ -1.85
UBE2D3-226ENST00000508635 CCDC185Q8N715 623 aa3.5□□□□□ -1.85
UBE2D3-226ENST00000508635 TC2NQ8N9U0 490 aa3.5□□□□□ -1.85
UBE2D3-226ENST00000508635 SAP25Q8TEE9 199 aa3.5□□□□□ -1.85
UBE2D3-226ENST00000508635 FAM172AQ8WUF8 416 aa3.5□□□□□ -1.85
UBE2D3-226ENST00000508635 RXFP2Q8WXD0 754 aa3.5□□□□□ -1.85
UBE2D3-226ENST00000508635 ARRDC3Q96B67 414 aa3.5□□□□□ -1.85
UBE2D3-226ENST00000508635 SKA1Q96BD8 255 aa3.5□□□□□ -1.85
UBE2D3-226ENST00000508635 HIC2Q96JB3 615 aa3.5□□□□□ -1.85
UBE2D3-226ENST00000508635 SERAC1Q96JX3 654 aa3.5□□□□□ -1.85
UBE2D3-226ENST00000508635 CHP1Q99653 195 aa3.5□□□□□ -1.85
UBE2D3-226ENST00000508635 NUDT22Q9BRQ3 303 aa3.5□□□□□ -1.85
UBE2D3-226ENST00000508635 ELOVL1Q9BW60 279 aa3.5□□□□□ -1.85
UBE2D3-226ENST00000508635 NUAK2Q9H093 628 aa3.5□□□□□ -1.85
UBE2D3-226ENST00000508635 RETREG1Q9H6L5 497 aa3.5□□□□□ -1.85
UBE2D3-226ENST00000508635 ERVMER34-1Q9H9K5 563 aa3.5□□□□□ -1.85
UBE2D3-226ENST00000508635 PREBQ9HCU5 417 aa3.5□□□□□ -1.85
UBE2D3-226ENST00000508635 PARVAQ9NVD7 372 aa3.5□□□□□ -1.85
UBE2D3-226ENST00000508635 ARL8BQ9NVJ2 186 aa3.5□□□□□ -1.85
UBE2D3-226ENST00000508635 LRFN1Q9P244 771 aa3.5□□□□□ -1.85
UBE2D3-226ENST00000508635 OR12D3Q9UGF7 316 aa3.5□□□□□ -1.85
UBE2D3-226ENST00000508635 IL36AQ9UHA7 158 aa3.5□□□□□ -1.85
UBE2D3-226ENST00000508635 NEU3Q9UQ49 428 aa3.5□□□□□ -1.85
UBE2D3-226ENST00000508635 ZFHX4Q86UP3 3567 aa3.5□□□□□ -1.85
UBE2D3-226ENST00000508635 NUMA1Q14980 2115 aa3.5□□□□□ -1.85
UBE2D3-226ENST00000508635 CEP192Q8TEP8 1941 aa3.5□□□□□ -1.85
UBE2D3-226ENST00000508635 ADAMTS9Q9P2N4 1935 aa3.5□□□□□ -1.85
UBE2D3-226ENST00000508635 DOCK9Q9BZ29 2069 aa3.5□□□□□ -1.85
UBE2D3-226ENST00000508635 CACNA1EQ15878 2313 aa3.49□□□□□ -1.85
UBE2D3-226ENST00000508635 PCNX2A6NKB5 2137 aa3.49□□□□□ -1.85
UBE2D3-226ENST00000508635 AKR1B15C9JRZ8 316 aaPredicted RBP3.49□□□□□ -1.85
UBE2D3-226ENST00000508635 PRAMEF26H0Y7S4 382 aa3.49□□□□□ -1.85
UBE2D3-226ENST00000508635 TAF4O00268 1085 aa3.49□□□□□ -1.85
UBE2D3-226ENST00000508635 KPNA3O00505 521 aaPredicted RBP3.49□□□□□ -1.85
UBE2D3-226ENST00000508635 TRIM38O00635 465 aa3.49□□□□□ -1.85
UBE2D3-226ENST00000508635 FCHO1O14526 889 aa3.49□□□□□ -1.85
UBE2D3-226ENST00000508635 DSCR3O14972 297 aa3.49□□□□□ -1.85
UBE2D3-226ENST00000508635 YKT6O15498 198 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms