RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 CEP295NLQ96MC4 621 aa4.48□□□□□ -1.69
PDLIM5-211ENST00000508531 COG8Q96MW5 612 aa4.48□□□□□ -1.69
PDLIM5-211ENST00000508531 ZNF578Q96N58 590 aaPredicted RBP4.48□□□□□ -1.69
PDLIM5-211ENST00000508531 CAMK1GQ96NX5 476 aa4.48□□□□□ -1.69
PDLIM5-211ENST00000508531 MTMR9Q96QG7 549 aa4.48□□□□□ -1.69
PDLIM5-211ENST00000508531 VPS35Q96QK1 796 aa4.48□□□□□ -1.69
PDLIM5-211ENST00000508531 HIST1H2AAQ96QV6 131 aa4.48□□□□□ -1.69
PDLIM5-211ENST00000508531 APOL4Q9BPW4 351 aa4.48□□□□□ -1.69
PDLIM5-211ENST00000508531 CCDC106Q9BWC9 280 aa4.48□□□□□ -1.69
PDLIM5-211ENST00000508531 SCNM1Q9BWG6 230 aa4.48□□□□□ -1.69
PDLIM5-211ENST00000508531 NMUR2Q9GZQ4 415 aa4.48□□□□□ -1.69
PDLIM5-211ENST00000508531 NUAK2Q9H093 628 aa4.48□□□□□ -1.69
PDLIM5-211ENST00000508531 UPF3AQ9H1J1 476 aaKnown RBP4.48□□□□□ -1.69
PDLIM5-211ENST00000508531 HIPK2Q9H2X6 1198 aa4.48□□□□□ -1.69
PDLIM5-211ENST00000508531 OR51B5Q9H339 312 aa4.48□□□□□ -1.69
PDLIM5-211ENST00000508531 GOLPH3Q9H4A6 298 aa4.48□□□□□ -1.69
PDLIM5-211ENST00000508531 DPEP3Q9H4B8 488 aa4.48□□□□□ -1.69
PDLIM5-211ENST00000508531 RPF2Q9H7B2 306 aaKnown RBP4.48□□□□□ -1.69
PDLIM5-211ENST00000508531 EFCAB1Q9HAE3 211 aa4.48□□□□□ -1.69
PDLIM5-211ENST00000508531 SCPEP1Q9HB40 452 aa4.48□□□□□ -1.69
PDLIM5-211ENST00000508531 TM9SF3Q9HD45 589 aa4.48□□□□□ -1.69
PDLIM5-211ENST00000508531 FBXO8Q9NRD0 319 aa4.48□□□□□ -1.69
PDLIM5-211ENST00000508531 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.48□□□□□ -1.69
PDLIM5-211ENST00000508531 STEAP1Q9UHE8 339 aa4.48□□□□□ -1.69
PDLIM5-211ENST00000508531 GLS2Q9UI32 602 aa4.48□□□□□ -1.69
PDLIM5-211ENST00000508531 ZNF229Q9UJW7 825 aa4.48□□□□□ -1.69
PDLIM5-211ENST00000508531 ANAPC2Q9UJX6 822 aa4.48□□□□□ -1.69
PDLIM5-211ENST00000508531 KIAA1257Q9ULG3 409 aa4.48□□□□□ -1.69
PDLIM5-211ENST00000508531 FZD4Q9ULV1 537 aa4.48□□□□□ -1.69
PDLIM5-211ENST00000508531 PCDHGB3Q9Y5G1 929 aa4.48□□□□□ -1.69
PDLIM5-211ENST00000508531 ALG6Q9Y672 507 aa4.48□□□□□ -1.69
PDLIM5-211ENST00000508531 FAM205AQ6ZU69 1335 aa4.47□□□□□ -1.69
PDLIM5-211ENST00000508531 C1orf232A0A0U1RR37 186 aa4.47□□□□□ -1.69
PDLIM5-211ENST00000508531 LINC00854A0A1B0GVQ3 168 aa4.47□□□□□ -1.69
PDLIM5-211ENST00000508531 A0A1W2PPC1 479 aa4.47□□□□□ -1.69
PDLIM5-211ENST00000508531 TSPY2A6NKD2 308 aa4.47□□□□□ -1.69
PDLIM5-211ENST00000508531 AQP7P3A6NL99 342 aa4.47□□□□□ -1.69
PDLIM5-211ENST00000508531 MEI4A8MW99 385 aa4.47□□□□□ -1.69
PDLIM5-211ENST00000508531 ISM1B1AKI9 464 aa4.47□□□□□ -1.69
PDLIM5-211ENST00000508531 PRR23D1E9PI22 279 aaPredicted RBP4.47□□□□□ -1.69
PDLIM5-211ENST00000508531 PSMD11O00231 422 aa4.47□□□□□ -1.69
PDLIM5-211ENST00000508531 PDXKO00764 312 aa4.47□□□□□ -1.69
PDLIM5-211ENST00000508531 COPEO14579 308 aa4.47□□□□□ -1.69
PDLIM5-211ENST00000508531 RRHO14718 337 aa4.47□□□□□ -1.69
PDLIM5-211ENST00000508531 EPHB6O15197 1021 aa4.47□□□□□ -1.69
PDLIM5-211ENST00000508531 TRIM3O75382 744 aaPredicted RBP4.47□□□□□ -1.69
PDLIM5-211ENST00000508531 RFPL2O75678 378 aa4.47□□□□□ -1.69
PDLIM5-211ENST00000508531 EPN2O95208 641 aa4.47□□□□□ -1.69
PDLIM5-211ENST00000508531 CPNE6O95741 557 aa4.47□□□□□ -1.69
PDLIM5-211ENST00000508531 WDPCPO95876 746 aa4.47□□□□□ -1.69
PDLIM5-211ENST00000508531 UGT2B4P06133 528 aa4.47□□□□□ -1.69
PDLIM5-211ENST00000508531 YES1P07947 543 aa4.47□□□□□ -1.69
PDLIM5-211ENST00000508531 INHBAP08476 426 aa4.47□□□□□ -1.69
PDLIM5-211ENST00000508531 TSPY3P0CV98 308 aa4.47□□□□□ -1.69
PDLIM5-211ENST00000508531 TSPY8P0CW00 308 aa4.47□□□□□ -1.69
PDLIM5-211ENST00000508531 PRR23D2P0DMB1 279 aaPredicted RBP4.47□□□□□ -1.69
PDLIM5-211ENST00000508531 TXNP10599 105 aaKnown RBP4.47□□□□□ -1.69
PDLIM5-211ENST00000508531 CDH1P12830 882 aa4.47□□□□□ -1.69
PDLIM5-211ENST00000508531 IL1R1P14778 569 aa4.47□□□□□ -1.69
PDLIM5-211ENST00000508531 TPH1P17752 444 aa4.47□□□□□ -1.69
PDLIM5-211ENST00000508531 IL10P22301 178 aa4.47□□□□□ -1.69
PDLIM5-211ENST00000508531 ME2P23368 584 aa4.47□□□□□ -1.69
PDLIM5-211ENST00000508531 MYF6P23409 242 aa4.47□□□□□ -1.69
PDLIM5-211ENST00000508531 CXCR2P25025 360 aa4.47□□□□□ -1.69
PDLIM5-211ENST00000508531 CHKAP35790 457 aa4.47□□□□□ -1.69
PDLIM5-211ENST00000508531 KRT20P35900 424 aa4.47□□□□□ -1.69
PDLIM5-211ENST00000508531 CPOXP36551 454 aa4.47□□□□□ -1.69
PDLIM5-211ENST00000508531 PIK3CAP42336 1068 aa4.47□□□□□ -1.69
PDLIM5-211ENST00000508531 GNPDA1P46926 289 aa4.47□□□□□ -1.69
PDLIM5-211ENST00000508531 SLC26A2P50443 739 aa4.47□□□□□ -1.69
PDLIM5-211ENST00000508531 SERPINB9P50453 376 aa4.47□□□□□ -1.69
PDLIM5-211ENST00000508531 FKBP1BP68106 108 aa4.47□□□□□ -1.69
PDLIM5-211ENST00000508531 MPP1Q00013 466 aa4.47□□□□□ -1.69
PDLIM5-211ENST00000508531 TSPY1Q01534 308 aa4.47□□□□□ -1.69
PDLIM5-211ENST00000508531 TNFAIP2Q03169 654 aa4.47□□□□□ -1.69
PDLIM5-211ENST00000508531 SLC18A2Q05940 514 aa4.47□□□□□ -1.69
PDLIM5-211ENST00000508531 SELENBP1Q13228 472 aa4.47□□□□□ -1.69
PDLIM5-211ENST00000508531 CTTNQ14247 550 aaKnown RBP4.47□□□□□ -1.69
PDLIM5-211ENST00000508531 ERV3-1Q14264 604 aa4.47□□□□□ -1.69
PDLIM5-211ENST00000508531 KCNAB1Q14722 419 aa4.47□□□□□ -1.69
PDLIM5-211ENST00000508531 POU6F1Q14863 301 aa4.47□□□□□ -1.69
PDLIM5-211ENST00000508531 ANGPT1Q15389 498 aa4.47□□□□□ -1.69
PDLIM5-211ENST00000508531 DLG2Q15700 870 aa4.47□□□□□ -1.69
PDLIM5-211ENST00000508531 NFIL3Q16649 462 aa4.47□□□□□ -1.69
PDLIM5-211ENST00000508531 FAM110CQ1W6H9 321 aa4.47□□□□□ -1.69
PDLIM5-211ENST00000508531 SMU1Q2TAY7 513 aa4.47□□□□□ -1.69
PDLIM5-211ENST00000508531 ZFP69Q49AA0 526 aa4.47□□□□□ -1.69
PDLIM5-211ENST00000508531 CRY2Q49AN0 593 aa4.47□□□□□ -1.69
PDLIM5-211ENST00000508531 INTS11Q5TA45 600 aaKnown RBP4.47□□□□□ -1.69
PDLIM5-211ENST00000508531 RNASEH2BQ5TBB1 312 aaKnown RBP4.47□□□□□ -1.69
PDLIM5-211ENST00000508531 FAXCQ5TGI0 409 aa4.47□□□□□ -1.69
PDLIM5-211ENST00000508531 C12orf60Q5U649 245 aa4.47□□□□□ -1.69
PDLIM5-211ENST00000508531 RSBN1Q5VWQ0 802 aaPredicted RBP4.47□□□□□ -1.69
PDLIM5-211ENST00000508531 IZUMO3Q5VZ72 239 aa4.47□□□□□ -1.69
PDLIM5-211ENST00000508531 KRT79Q5XKE5 535 aa4.47□□□□□ -1.69
PDLIM5-211ENST00000508531 NEK5Q6P3R8 708 aa4.47□□□□□ -1.69
PDLIM5-211ENST00000508531 FAM171BQ6P995 826 aa4.47□□□□□ -1.69
PDLIM5-211ENST00000508531 PIK3AP1Q6ZUJ8 805 aa4.47□□□□□ -1.69
PDLIM5-211ENST00000508531 NIPA1Q7RTP0 329 aa4.47□□□□□ -1.69
PDLIM5-211ENST00000508531 IGFN1Q86VF2 1251 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms