RNA–Protein interactions for RNA: ENST00000504327.1

PDLIM1P4-201, Transcript of PDZ and LIM domain 1 pseudogene 4, humanhuman

BASIC

Gene PDLIM1P4, Length 1,006 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P4-201ENST00000504327 SPACA6W5XKT8 324 aa4.14□□□□□ -1.75
PDLIM1P4-201ENST00000504327 LRRC37AA6NMS7 1700 aa4.14□□□□□ -1.75
PDLIM1P4-201ENST00000504327 COL4A5P29400 1685 aa4.13□□□□□ -1.75
PDLIM1P4-201ENST00000504327 LTBP1Q14766 1721 aa4.13□□□□□ -1.75
PDLIM1P4-201ENST00000504327 A0A087WZY1 265 aa4.13□□□□□ -1.75
PDLIM1P4-201ENST00000504327 FAM237AA0A1B0GTK4 181 aa4.13□□□□□ -1.75
PDLIM1P4-201ENST00000504327 C2orf92A0A1B0GVN3 265 aa4.13□□□□□ -1.75
PDLIM1P4-201ENST00000504327 FAM47DPA6NHR8 397 aa4.13□□□□□ -1.75
PDLIM1P4-201ENST00000504327 KIF2AO00139 706 aaPredicted RBP4.13□□□□□ -1.75
PDLIM1P4-201ENST00000504327 SOCS6O14544 535 aa4.13□□□□□ -1.75
PDLIM1P4-201ENST00000504327 OGG1O15527 345 aa4.13□□□□□ -1.75
PDLIM1P4-201ENST00000504327 CNOT3O75175 753 aaKnown RBP4.13□□□□□ -1.75
PDLIM1P4-201ENST00000504327 RHOBTB1O94844 696 aa4.13□□□□□ -1.75
PDLIM1P4-201ENST00000504327 OR6B1O95007 311 aa4.13□□□□□ -1.75
PDLIM1P4-201ENST00000504327 TFP02787 698 aa4.13□□□□□ -1.75
PDLIM1P4-201ENST00000504327 HIST1H2ABP04908 130 aa4.13□□□□□ -1.75
PDLIM1P4-201ENST00000504327 VPREB1P12018 145 aa4.13□□□□□ -1.75
PDLIM1P4-201ENST00000504327 SLC2A4P14672 509 aa4.13□□□□□ -1.75
PDLIM1P4-201ENST00000504327 IL7RP16871 459 aa4.13□□□□□ -1.75
PDLIM1P4-201ENST00000504327 HOXB9P17482 250 aaPredicted RBP4.13□□□□□ -1.75
PDLIM1P4-201ENST00000504327 IGFBP2P18065 325 aa4.13□□□□□ -1.75
PDLIM1P4-201ENST00000504327 GNAZP19086 355 aa4.13□□□□□ -1.75
PDLIM1P4-201ENST00000504327 HIST1H2ADP20671 130 aa4.13□□□□□ -1.75
PDLIM1P4-201ENST00000504327 MATN1P21941 496 aa4.13□□□□□ -1.75
PDLIM1P4-201ENST00000504327 ACP1P24666 158 aa4.13□□□□□ -1.75
PDLIM1P4-201ENST00000504327 DUSP1P28562 367 aa4.13□□□□□ -1.75
PDLIM1P4-201ENST00000504327 HOXA7P31268 230 aaPredicted RBP4.13□□□□□ -1.75
PDLIM1P4-201ENST00000504327 ECT2LQ008S8 904 aa4.13□□□□□ -1.75
PDLIM1P4-201ENST00000504327 STIM1Q13586 685 aa4.13□□□□□ -1.75
PDLIM1P4-201ENST00000504327 TSTA3Q13630 321 aaPredicted RBP4.13□□□□□ -1.75
PDLIM1P4-201ENST00000504327 SHBQ15464 509 aa4.13□□□□□ -1.75
PDLIM1P4-201ENST00000504327 UGCGQ16739 394 aa4.13□□□□□ -1.75
PDLIM1P4-201ENST00000504327 TAF1BQ53T94 588 aaPredicted RBP4.13□□□□□ -1.75
PDLIM1P4-201ENST00000504327 CXorf66Q5JRM2 361 aaPredicted RBP4.13□□□□□ -1.75
PDLIM1P4-201ENST00000504327 STXBP5Q5T5C0 1151 aa4.13□□□□□ -1.75
PDLIM1P4-201ENST00000504327 AADACL4Q5VUY2 407 aa4.13□□□□□ -1.75
PDLIM1P4-201ENST00000504327 TMEM211Q6ICI0 200 aa4.13□□□□□ -1.75
PDLIM1P4-201ENST00000504327 OR6B2Q6IFH4 312 aa4.13□□□□□ -1.75
PDLIM1P4-201ENST00000504327 ARSKQ6UWY0 536 aa4.13□□□□□ -1.75
PDLIM1P4-201ENST00000504327 NHLRC1Q6VVB1 395 aa4.13□□□□□ -1.75
PDLIM1P4-201ENST00000504327 KYAT3Q6YP21 454 aaKnown RBP4.13□□□□□ -1.75
PDLIM1P4-201ENST00000504327 RBM44Q6ZP01 1051 aaKnown RBP4.13□□□□□ -1.75
PDLIM1P4-201ENST00000504327 C1orf186Q6ZWK4 172 aa4.13□□□□□ -1.75
PDLIM1P4-201ENST00000504327 HIST3H2AQ7L7L0 130 aa4.13□□□□□ -1.75
PDLIM1P4-201ENST00000504327 PRSS45Q7RTY3 260 aa4.13□□□□□ -1.75
PDLIM1P4-201ENST00000504327 ZNF573Q86YE8 665 aa4.13□□□□□ -1.75
PDLIM1P4-201ENST00000504327 ZNF679Q8IYX0 411 aa4.13□□□□□ -1.75
PDLIM1P4-201ENST00000504327 PDCL2Q8N4E4 241 aa4.13□□□□□ -1.75
PDLIM1P4-201ENST00000504327 ARL14Q8N4G2 192 aa4.13□□□□□ -1.75
PDLIM1P4-201ENST00000504327 EIF1ADQ8N9N8 165 aaKnown RBP4.13□□□□□ -1.75
PDLIM1P4-201ENST00000504327 SLC4A11Q8NBS3 891 aa4.13□□□□□ -1.75
PDLIM1P4-201ENST00000504327 BBOF1Q8ND07 529 aa4.13□□□□□ -1.75
PDLIM1P4-201ENST00000504327 ADPRHL1Q8NDY3 354 aa4.13□□□□□ -1.75
PDLIM1P4-201ENST00000504327 ZNF548Q8NEK5 533 aaPredicted RBP4.13□□□□□ -1.75
PDLIM1P4-201ENST00000504327 OCC1Q8TAD7 63 aa4.13□□□□□ -1.75
PDLIM1P4-201ENST00000504327 GANCQ8TET4 914 aa4.13□□□□□ -1.75
PDLIM1P4-201ENST00000504327 METTL21AQ8WXB1 218 aa4.13□□□□□ -1.75
PDLIM1P4-201ENST00000504327 RAPGEF5Q92565 580 aa4.13□□□□□ -1.75
PDLIM1P4-201ENST00000504327 SNRNP40Q96DI7 357 aaKnown RBP4.13□□□□□ -1.75
PDLIM1P4-201ENST00000504327 CCDC51Q96ER9 411 aa4.13□□□□□ -1.75
PDLIM1P4-201ENST00000504327 BSCL2Q96G97 398 aaPredicted RBP4.13□□□□□ -1.75
PDLIM1P4-201ENST00000504327 TPD52L3Q96J77 140 aa4.13□□□□□ -1.75
PDLIM1P4-201ENST00000504327 FAM210AQ96ND0 272 aa4.13□□□□□ -1.75
PDLIM1P4-201ENST00000504327 LRRC3BQ96PB8 259 aa4.13□□□□□ -1.75
PDLIM1P4-201ENST00000504327 KLHL5Q96PQ7 755 aa4.13□□□□□ -1.75
PDLIM1P4-201ENST00000504327 ZBTB18Q99592 522 aa4.13□□□□□ -1.75
PDLIM1P4-201ENST00000504327 RAD9AQ99638 391 aa4.13□□□□□ -1.75
PDLIM1P4-201ENST00000504327 CCT7Q99832 543 aa4.13□□□□□ -1.75
PDLIM1P4-201ENST00000504327 ABHD6Q9BV23 337 aa4.13□□□□□ -1.75
PDLIM1P4-201ENST00000504327 KATNB1Q9BVA0 655 aa4.13□□□□□ -1.75
PDLIM1P4-201ENST00000504327 MOV10L1Q9BXT6 1211 aaKnown RBP4.13□□□□□ -1.75
PDLIM1P4-201ENST00000504327 API5Q9BZZ5 524 aaKnown RBP4.13□□□□□ -1.75
PDLIM1P4-201ENST00000504327 THAP2Q9H0W7 228 aa4.13□□□□□ -1.75
PDLIM1P4-201ENST00000504327 P2RY12Q9H244 342 aa4.13□□□□□ -1.75
PDLIM1P4-201ENST00000504327 SLCO5A1Q9H2Y9 848 aa4.13□□□□□ -1.75
PDLIM1P4-201ENST00000504327 FZD8Q9H461 694 aa4.13□□□□□ -1.75
PDLIM1P4-201ENST00000504327 CDCP1Q9H5V8 836 aa4.13□□□□□ -1.75
PDLIM1P4-201ENST00000504327 MINDY3Q9H8M7 445 aa4.13□□□□□ -1.75
PDLIM1P4-201ENST00000504327 ECT2Q9H8V3 914 aa4.13□□□□□ -1.75
PDLIM1P4-201ENST00000504327 EPB41L5Q9HCM4 733 aa4.13□□□□□ -1.75
PDLIM1P4-201ENST00000504327 ZNF304Q9HCX3 659 aa4.13□□□□□ -1.75
PDLIM1P4-201ENST00000504327 FAM114A2Q9NRY5 505 aa4.13□□□□□ -1.75
PDLIM1P4-201ENST00000504327 FAM212BQ9NTI7 297 aaPredicted RBP4.13□□□□□ -1.75
PDLIM1P4-201ENST00000504327 PRMT7Q9NVM4 692 aaPredicted RBP4.13□□□□□ -1.75
PDLIM1P4-201ENST00000504327 PAG1Q9NWQ8 432 aa4.13□□□□□ -1.75
PDLIM1P4-201ENST00000504327 P4HTMQ9NXG6 502 aa4.13□□□□□ -1.75
PDLIM1P4-201ENST00000504327 SMPD3Q9NY59 655 aaPredicted RBP4.13□□□□□ -1.75
PDLIM1P4-201ENST00000504327 COPG2Q9UBF2 871 aa4.13□□□□□ -1.75
PDLIM1P4-201ENST00000504327 DHDHQ9UQ10 334 aa4.13□□□□□ -1.75
PDLIM1P4-201ENST00000504327 DUOX1Q9NRD9 1551 aa4.13□□□□□ -1.75
PDLIM1P4-201ENST00000504327 TTC41PQ6P2S7 1318 aa4.13□□□□□ -1.75
PDLIM1P4-201ENST00000504327 RTL9Q8NET4 1388 aa4.13□□□□□ -1.75
PDLIM1P4-201ENST00000504327 DICER1Q9UPY3 1922 aaKnown RBP4.13□□□□□ -1.75
PDLIM1P4-201ENST00000504327 CUL9Q8IWT3 2517 aa4.13□□□□□ -1.75
PDLIM1P4-201ENST00000504327 A0A0A6YYC8 382 aaPredicted RBP4.12□□□□□ -1.75
PDLIM1P4-201ENST00000504327 C15orf38-AP3S2A0A0A6YYH1 394 aa4.12□□□□□ -1.75
PDLIM1P4-201ENST00000504327 OR6C68A6NDL8 312 aa4.12□□□□□ -1.75
PDLIM1P4-201ENST00000504327 C5orf51A6NDU8 294 aa4.12□□□□□ -1.75
PDLIM1P4-201ENST00000504327 I3L1I5 382 aaPredicted RBP4.12□□□□□ -1.75
PDLIM1P4-201ENST00000504327 TEX28O15482 410 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms