RNA–Protein interactions for RNA: ENST00000503418.5

UBE2D3-215, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 662 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-215ENST00000503418 MAP10Q9P2G4 905 aa18.6■□□□□ 0.57
UBE2D3-215ENST00000503418 KLK4Q9Y5K2 254 aa18.6■□□□□ 0.57
UBE2D3-215ENST00000503418 HEATR5BQ9P2D3 2071 aa18.59■□□□□ 0.57
UBE2D3-215ENST00000503418 LOC105369274A0A096LPK9 316 aa18.59■□□□□ 0.57
UBE2D3-215ENST00000503418 LOC102723532A0A0G2JNH3 316 aa18.59■□□□□ 0.57
UBE2D3-215ENST00000503418 HYKKA2RU49 373 aa18.59■□□□□ 0.57
UBE2D3-215ENST00000503418 FITM1A5D6W6 292 aa18.59■□□□□ 0.57
UBE2D3-215ENST00000503418 AGPSO00116 658 aa18.59■□□□□ 0.57
UBE2D3-215ENST00000503418 MYO1CO00159 1063 aa18.59■□□□□ 0.57
UBE2D3-215ENST00000503418 SYF2O95926 243 aaKnown RBP18.59■□□□□ 0.57
UBE2D3-215ENST00000503418 ALBP02768 609 aa18.59■□□□□ 0.57
UBE2D3-215ENST00000503418 ERGP11308 486 aa18.59■□□□□ 0.57
UBE2D3-215ENST00000503418 UQCRFS1P47985 274 aa18.59■□□□□ 0.57
UBE2D3-215ENST00000503418 MYBPC3Q14896 1274 aa18.59■□□□□ 0.57
UBE2D3-215ENST00000503418 PPP1R7Q15435 360 aa18.59■□□□□ 0.57
UBE2D3-215ENST00000503418 ZNF549Q6P9A3 640 aa18.59■□□□□ 0.57
UBE2D3-215ENST00000503418 PPIL6Q8IXY8 311 aa18.59■□□□□ 0.57
UBE2D3-215ENST00000503418 OR4N4Q8N0Y3 316 aa18.59■□□□□ 0.57
UBE2D3-215ENST00000503418 AGGF1Q8N302 714 aaeCLIP18.59■□□□□ 0.57
UBE2D3-215ENST00000503418 GIMAP7Q8NHV1 300 aa18.59■□□□□ 0.57
UBE2D3-215ENST00000503418 CALML6Q8TD86 181 aa18.59■□□□□ 0.57
UBE2D3-215ENST00000503418 PKP4Q99569 1192 aa18.59■□□□□ 0.57
UBE2D3-215ENST00000503418 ZFYVE21Q9BQ24 234 aa18.59■□□□□ 0.57
UBE2D3-215ENST00000503418 WDR54Q9H977 334 aa18.59■□□□□ 0.57
UBE2D3-215ENST00000503418 ABCF3Q9NUQ8 709 aa18.59■□□□□ 0.57
UBE2D3-215ENST00000503418 STOX2Q9P2F5 926 aaPredicted RBP18.59■□□□□ 0.57
UBE2D3-215ENST00000503418 ANKMY1Q9P2S6 941 aa18.59■□□□□ 0.57
UBE2D3-215ENST00000503418 CTSFQ9UBX1 484 aa18.59■□□□□ 0.57
UBE2D3-215ENST00000503418 FLNCQ14315 2725 aa18.59■□□□□ 0.57
UBE2D3-215ENST00000503418 MDC1Q14676 2089 aaKnown RBP18.58■□□□□ 0.57
UBE2D3-215ENST00000503418 OR2A25A4D2G3 310 aa18.58■□□□□ 0.56
UBE2D3-215ENST00000503418 ZSCAN12O43309 604 aa18.58■□□□□ 0.56
UBE2D3-215ENST00000503418 ALPPP05187 535 aa18.58■□□□□ 0.56
UBE2D3-215ENST00000503418 MMP11P24347 488 aa18.58■□□□□ 0.56
UBE2D3-215ENST00000503418 MAGEA3P43357 314 aa18.58■□□□□ 0.56
UBE2D3-215ENST00000503418 PNLIPRP1P54315 467 aa18.58■□□□□ 0.56
UBE2D3-215ENST00000503418 MPP1Q00013 466 aa18.58■□□□□ 0.56
UBE2D3-215ENST00000503418 ARHGAP19Q14CB8 494 aa18.58■□□□□ 0.56
UBE2D3-215ENST00000503418 PRR30Q53SZ7 412 aaPredicted RBP18.58■□□□□ 0.56
UBE2D3-215ENST00000503418 NEK10Q6ZWH5 1172 aa18.58■□□□□ 0.56
UBE2D3-215ENST00000503418 FAM26EQ8N5C1 309 aa18.58■□□□□ 0.56
UBE2D3-215ENST00000503418 Q8NA96 180 aa18.58■□□□□ 0.56
UBE2D3-215ENST00000503418 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.58■□□□□ 0.56
UBE2D3-215ENST00000503418 PPFIBP2Q8ND30 876 aa18.58■□□□□ 0.56
UBE2D3-215ENST00000503418 KCNJ9Q92806 393 aa18.58■□□□□ 0.56
UBE2D3-215ENST00000503418 SIGLEC10Q96LC7 697 aa18.58■□□□□ 0.56
UBE2D3-215ENST00000503418 SPSB2Q99619 263 aa18.58■□□□□ 0.56
UBE2D3-215ENST00000503418 GPR21Q99679 349 aa18.58■□□□□ 0.56
UBE2D3-215ENST00000503418 SLC26A1Q9H2B4 701 aa18.58■□□□□ 0.56
UBE2D3-215ENST00000503418 ATP13A2Q9NQ11 1180 aa18.58■□□□□ 0.56
UBE2D3-215ENST00000503418 TRMT1Q9NXH9 659 aaKnown RBP18.58■□□□□ 0.56
UBE2D3-215ENST00000503418 C5AR2Q9P296 337 aa18.58■□□□□ 0.56
UBE2D3-215ENST00000503418 TAC3Q9UHF0 121 aa18.58■□□□□ 0.56
UBE2D3-215ENST00000503418 FBXL4Q9UKA2 621 aa18.58■□□□□ 0.56
UBE2D3-215ENST00000503418 NXT1Q9UKK6 140 aaKnown RBP18.58■□□□□ 0.56
UBE2D3-215ENST00000503418 SNX12Q9UMY4 172 aa18.58■□□□□ 0.56
UBE2D3-215ENST00000503418 MAP4K5Q9Y4K4 846 aa18.58■□□□□ 0.56
UBE2D3-215ENST00000503418 SHANK1Q9Y566 2161 aa18.58■□□□□ 0.56
UBE2D3-215ENST00000503418 PTPN13Q12923 2485 aa18.58■□□□□ 0.56
UBE2D3-215ENST00000503418 ZNF839A8K0R7 811 aa18.57■□□□□ 0.56
UBE2D3-215ENST00000503418 ALOX12BO75342 701 aa18.57■□□□□ 0.56
UBE2D3-215ENST00000503418 VPS26AO75436 327 aa18.57■□□□□ 0.56
UBE2D3-215ENST00000503418 MED26O95402 600 aa18.57■□□□□ 0.56
UBE2D3-215ENST00000503418 ONECUT2O95948 504 aa18.57■□□□□ 0.56
UBE2D3-215ENST00000503418 GNLYP22749 145 aa18.57■□□□□ 0.56
UBE2D3-215ENST00000503418 ITGA3P26006 1051 aa18.57■□□□□ 0.56
UBE2D3-215ENST00000503418 SRSF1Q07955 248 aaKnown RBP eCLIP18.57■□□□□ 0.562e-8■□□□□ 10.6
UBE2D3-215ENST00000503418 INPP5JQ15735 1006 aaPredicted RBP18.57■□□□□ 0.56
UBE2D3-215ENST00000503418 HSP90AA5PQ58FG0 334 aa18.57■□□□□ 0.56
UBE2D3-215ENST00000503418 RNASEH2BQ5TBB1 312 aaKnown RBP18.57■□□□□ 0.56
UBE2D3-215ENST00000503418 KCNMB4Q86W47 210 aa18.57■□□□□ 0.56
UBE2D3-215ENST00000503418 LMNTD2Q8IXW0 634 aa18.57■□□□□ 0.56
UBE2D3-215ENST00000503418 GALNT11Q8NCW6 608 aa18.57■□□□□ 0.56
UBE2D3-215ENST00000503418 COL26A1Q96A83 441 aa18.57■□□□□ 0.56
UBE2D3-215ENST00000503418 PNPLA2Q96AD5 504 aa18.57■□□□□ 0.56
UBE2D3-215ENST00000503418 CABS1Q96KC9 395 aa18.57■□□□□ 0.56
UBE2D3-215ENST00000503418 PLCD4Q9BRC7 762 aa18.57■□□□□ 0.56
UBE2D3-215ENST00000503418 FAM167BQ9BTA0 163 aa18.57■□□□□ 0.56
UBE2D3-215ENST00000503418 GRPEL1Q9HAV7 217 aa18.57■□□□□ 0.56
UBE2D3-215ENST00000503418 ZNF304Q9HCX3 659 aa18.57■□□□□ 0.56
UBE2D3-215ENST00000503418 ENAMQ9NRM1 1142 aa18.57■□□□□ 0.56
UBE2D3-215ENST00000503418 IARS2Q9NSE4 1012 aaKnown RBP18.57■□□□□ 0.56
UBE2D3-215ENST00000503418 KLHL42Q9P2K6 505 aa18.57■□□□□ 0.56
UBE2D3-215ENST00000503418 ASIC3Q9UHC3 531 aa18.57■□□□□ 0.56
UBE2D3-215ENST00000503418 FBXO5Q9UKT4 447 aa18.57■□□□□ 0.56
UBE2D3-215ENST00000503418 MED16Q9Y2X0 877 aa18.57■□□□□ 0.56
UBE2D3-215ENST00000503418 CYSRT1A8MQ03 144 aa18.56■□□□□ 0.56
UBE2D3-215ENST00000503418 H0YGG7 62 aa18.56■□□□□ 0.56
UBE2D3-215ENST00000503418 SOCS6O14544 535 aa18.56■□□□□ 0.56
UBE2D3-215ENST00000503418 KLHL41O60662 606 aa18.56■□□□□ 0.56
UBE2D3-215ENST00000503418 HAUS5O94927 633 aa18.56■□□□□ 0.56
UBE2D3-215ENST00000503418 CCNDBP1O95273 360 aa18.56■□□□□ 0.56
UBE2D3-215ENST00000503418 SLC16A8O95907 504 aa18.56■□□□□ 0.56
UBE2D3-215ENST00000503418 MPC1LP0DKB6 136 aa18.56■□□□□ 0.56
UBE2D3-215ENST00000503418 ENO3P13929 434 aaPredicted RBP18.56■□□□□ 0.56
UBE2D3-215ENST00000503418 HSD17B2P37059 387 aa18.56■□□□□ 0.56
UBE2D3-215ENST00000503418 ARF3P61204 181 aaPredicted RBP18.56■□□□□ 0.56
UBE2D3-215ENST00000503418 AIMP2Q13155 320 aaKnown RBP18.56■□□□□ 0.56
UBE2D3-215ENST00000503418 RBBP7Q16576 425 aa18.56■□□□□ 0.56
UBE2D3-215ENST00000503418 MUM1Q2TAK8 710 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms