RNA–Protein interactions for RNA: ENST00000502908.2

SCARB2-203, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 2,552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-203ENST00000502908 ANXA5P08758 320 aa18.09■□□□□ 0.49
SCARB2-203ENST00000502908 NUDT7P0C024 238 aa18.09■□□□□ 0.49
SCARB2-203ENST00000502908 COL6A1P12109 1028 aa18.09■□□□□ 0.49
SCARB2-203ENST00000502908 PRKAR2AP13861 404 aaKnown RBP18.09■□□□□ 0.49
SCARB2-203ENST00000502908 HOXB9P17482 250 aaPredicted RBP18.09■□□□□ 0.49
SCARB2-203ENST00000502908 MAGP20916 626 aa18.09■□□□□ 0.49
SCARB2-203ENST00000502908 MAGEA2P43356 314 aa18.09■□□□□ 0.49
SCARB2-203ENST00000502908 RPS3AP61247 264 aaKnown RBP18.09■□□□□ 0.49
SCARB2-203ENST00000502908 MVKQ03426 396 aa18.09■□□□□ 0.49
SCARB2-203ENST00000502908 ACOX1Q15067 660 aa18.09■□□□□ 0.49
SCARB2-203ENST00000502908 PRAMEF9Q5VWM5 478 aa18.09■□□□□ 0.49
SCARB2-203ENST00000502908 CAPN13Q6MZZ7 669 aaPredicted RBP18.09■□□□□ 0.49
SCARB2-203ENST00000502908 BEND7Q8N7W2 519 aaPredicted RBP18.09■□□□□ 0.49
SCARB2-203ENST00000502908 GPR26Q8NDV2 337 aa18.09■□□□□ 0.49
SCARB2-203ENST00000502908 SETD9Q8NE22 299 aa18.09■□□□□ 0.49
SCARB2-203ENST00000502908 OR6Q1Q8NGQ2 317 aa18.09■□□□□ 0.49
SCARB2-203ENST00000502908 VMP1Q96GC9 406 aa18.09■□□□□ 0.49
SCARB2-203ENST00000502908 HSH2DQ96JZ2 352 aa18.09■□□□□ 0.49
SCARB2-203ENST00000502908 TTLL2Q9BWV7 592 aa18.09■□□□□ 0.49
SCARB2-203ENST00000502908 BBS2Q9BXC9 721 aa18.09■□□□□ 0.49
SCARB2-203ENST00000502908 ATG10Q9H0Y0 220 aa18.09■□□□□ 0.49
SCARB2-203ENST00000502908 MIR1-1HGQ9H1L0 117 aa18.09■□□□□ 0.49
SCARB2-203ENST00000502908 NMRK2Q9NPI5 230 aa18.09■□□□□ 0.49
SCARB2-203ENST00000502908 PDE4DIPQ5VU43 2346 aa18.09■□□□□ 0.49
SCARB2-203ENST00000502908 TET1Q8NFU7 2136 aa18.09■□□□□ 0.49
SCARB2-203ENST00000502908 A8MU76 341 aa18.09■□□□□ 0.49
SCARB2-203ENST00000502908 M0QX08 132 aa18.09■□□□□ 0.49
SCARB2-203ENST00000502908 CLIC1O00299 241 aa18.09■□□□□ 0.49
SCARB2-203ENST00000502908 WNT9AO14904 365 aa18.09■□□□□ 0.49
SCARB2-203ENST00000502908 AQP9O43315 295 aa18.09■□□□□ 0.49
SCARB2-203ENST00000502908 RGS10O43665 173 aa18.09■□□□□ 0.49
SCARB2-203ENST00000502908 PCDHGA12O60330 932 aa18.09■□□□□ 0.49
SCARB2-203ENST00000502908 CCNDBP1O95273 360 aa18.09■□□□□ 0.49
SCARB2-203ENST00000502908 VIPP01282 170 aa18.09■□□□□ 0.49
SCARB2-203ENST00000502908 FABP3P05413 133 aa18.09■□□□□ 0.49
SCARB2-203ENST00000502908 CD36P16671 472 aa18.09■□□□□ 0.49
SCARB2-203ENST00000502908 TGM1P22735 817 aa18.09■□□□□ 0.49
SCARB2-203ENST00000502908 RPS3P23396 243 aaKnown RBP eCLIP18.09■□□□□ 0.491e-6■■■■■ 29.8
SCARB2-203ENST00000502908 ACVR2AP27037 513 aa18.09■□□□□ 0.49
SCARB2-203ENST00000502908 CCR7P32248 378 aa18.09■□□□□ 0.49
SCARB2-203ENST00000502908 ST13P50502 369 aaKnown RBP18.09■□□□□ 0.49
SCARB2-203ENST00000502908 ARHGDIAP52565 204 aa18.09■□□□□ 0.49
SCARB2-203ENST00000502908 FCGRTP55899 365 aa18.09■□□□□ 0.49
SCARB2-203ENST00000502908 IL18R1Q13478 541 aa18.09■□□□□ 0.49
SCARB2-203ENST00000502908 CDH18Q13634 790 aa18.09■□□□□ 0.49
SCARB2-203ENST00000502908 DDX39BQ13838 428 aaKnown RBP18.09■□□□□ 0.49
SCARB2-203ENST00000502908 MAD2L1BPQ15013 274 aaPredicted RBP18.09■□□□□ 0.49
SCARB2-203ENST00000502908 GPR153Q6NV75 609 aa18.09■□□□□ 0.49
SCARB2-203ENST00000502908 NEK5Q6P3R8 708 aa18.09■□□□□ 0.49
SCARB2-203ENST00000502908 VRK3Q8IV63 474 aa18.09■□□□□ 0.49
SCARB2-203ENST00000502908 LGALS12Q96DT0 336 aa18.09■□□□□ 0.49
SCARB2-203ENST00000502908 CASD1Q96PB1 797 aa18.09■□□□□ 0.49
SCARB2-203ENST00000502908 TTPALQ9BTX7 342 aa18.09■□□□□ 0.49
SCARB2-203ENST00000502908 HECAQ9UBI9 543 aaPredicted RBP18.09■□□□□ 0.49
SCARB2-203ENST00000502908 SAMD4AQ9UPU9 718 aaKnown RBP18.09■□□□□ 0.49
SCARB2-203ENST00000502908 SLC22A14Q9Y267 594 aa18.09■□□□□ 0.49
SCARB2-203ENST00000502908 PCDHGB1Q9Y5G3 927 aa18.09■□□□□ 0.49
SCARB2-203ENST00000502908 FPGTO14772 594 aa18.08■□□□□ 0.49
SCARB2-203ENST00000502908 TRBC1P01850 177 aa18.08■□□□□ 0.49
SCARB2-203ENST00000502908 HMGA1P17096 107 aaKnown RBP18.08■□□□□ 0.49
SCARB2-203ENST00000502908 HIST2H2ACQ16777 129 aaPredicted RBP18.08■□□□□ 0.49
SCARB2-203ENST00000502908 ZC3H12BQ5HYM0 836 aaKnown RBP18.08■□□□□ 0.49
SCARB2-203ENST00000502908 PRSS36Q5K4E3 855 aa18.08■□□□□ 0.49
SCARB2-203ENST00000502908 MAL2Q969L2 176 aa18.08■□□□□ 0.49
SCARB2-203ENST00000502908 PLD4Q96BZ4 506 aa18.08■□□□□ 0.49
SCARB2-203ENST00000502908 SLC32A1Q9H598 525 aa18.08■□□□□ 0.49
SCARB2-203ENST00000502908 ABCB10Q9NRK6 738 aa18.08■□□□□ 0.49
SCARB2-203ENST00000502908 MAN2B2Q9Y2E5 1009 aa18.08■□□□□ 0.49
SCARB2-203ENST00000502908 NPIPB15A6NHN6 443 aaPredicted RBP18.08■□□□□ 0.48
SCARB2-203ENST00000502908 TTC34A8MYJ7 566 aa18.08■□□□□ 0.48
SCARB2-203ENST00000502908 YY2O15391 372 aa18.08■□□□□ 0.48
SCARB2-203ENST00000502908 MTX2O75431 263 aa18.08■□□□□ 0.48
SCARB2-203ENST00000502908 C21orf33P30042 268 aaPredicted RBP18.08■□□□□ 0.48
SCARB2-203ENST00000502908 BCL2L1Q07817 233 aa18.08■□□□□ 0.48
SCARB2-203ENST00000502908 PTCHD3Q3KNS1 767 aa18.08■□□□□ 0.48
SCARB2-203ENST00000502908 SYT6Q5T7P8 510 aaPredicted RBP18.08■□□□□ 0.48
SCARB2-203ENST00000502908 UBE2R2Q712K3 238 aaPredicted RBP18.08■□□□□ 0.48
SCARB2-203ENST00000502908 HTRA1Q92743 480 aa18.08■□□□□ 0.48
SCARB2-203ENST00000502908 SLIRPQ9GZT3 109 aaKnown RBP18.08■□□□□ 0.48
SCARB2-203ENST00000502908 NECTIN3Q9NQS3 549 aa18.08■□□□□ 0.48
SCARB2-203ENST00000502908 CLEC4EQ9ULY5 219 aa18.08■□□□□ 0.48
SCARB2-203ENST00000502908 PCDHB7Q9Y5E2 793 aa18.08■□□□□ 0.48
SCARB2-203ENST00000502908 EVPLLA8MZ36 301 aa18.07■□□□□ 0.48
SCARB2-203ENST00000502908 WBP4O75554 376 aaKnown RBP18.07■□□□□ 0.48
SCARB2-203ENST00000502908 KCNK5O95279 499 aa18.07■□□□□ 0.48
SCARB2-203ENST00000502908 JUNDP17535 347 aa18.07■□□□□ 0.48
SCARB2-203ENST00000502908 KIR3DL1P43629 444 aa18.07■□□□□ 0.48
SCARB2-203ENST00000502908 SEPHS1P49903 392 aa18.07■□□□□ 0.48
SCARB2-203ENST00000502908 SMAD3P84022 425 aaKnown RBP18.07■□□□□ 0.48
SCARB2-203ENST00000502908 BOP1Q14137 746 aaKnown RBP18.07■□□□□ 0.48
SCARB2-203ENST00000502908 TAF12Q16514 161 aa18.07■□□□□ 0.48
SCARB2-203ENST00000502908 PLD3Q8IV08 490 aa18.07■□□□□ 0.48
SCARB2-203ENST00000502908 NXPE1Q8N323 547 aa18.07■□□□□ 0.48
SCARB2-203ENST00000502908 DBF4BQ8NFT6 615 aa18.07■□□□□ 0.48
SCARB2-203ENST00000502908 PROX1Q92786 737 aa18.07■□□□□ 0.48
SCARB2-203ENST00000502908 DNASE1L2Q92874 299 aa18.07■□□□□ 0.48
SCARB2-203ENST00000502908 KCNC2Q96PR1 638 aa18.07■□□□□ 0.48
SCARB2-203ENST00000502908 KLHL25Q9H0H3 589 aa18.07■□□□□ 0.48
SCARB2-203ENST00000502908 CWH43Q9H720 699 aa18.07■□□□□ 0.48
SCARB2-203ENST00000502908 TM9SF3Q9HD45 589 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms