RNA–Protein interactions for RNA: ENST00000498711.1

CLTC-209, Transcript of clathrin heavy chain, humanhuman

TSL 1 (best)

Gene CLTC, Length 2,941 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-209ENST00000498711 PAK1IP1Q9NWT1 392 aaPredicted RBP3.84□□□□□ -1.8
CLTC-209ENST00000498711 RHBDL2Q9NX52 303 aa3.84□□□□□ -1.8
CLTC-209ENST00000498711 POLG2Q9UHN1 485 aa3.84□□□□□ -1.8
CLTC-209ENST00000498711 ENPP5Q9UJA9 477 aa3.84□□□□□ -1.8
CLTC-209ENST00000498711 LEF1Q9UJU2 399 aaPredicted RBP3.84□□□□□ -1.8
CLTC-209ENST00000498711 ZNF225Q9UK10 706 aa3.84□□□□□ -1.8
CLTC-209ENST00000498711 OAZ3Q9UMX2 235 aa3.84□□□□□ -1.8
CLTC-209ENST00000498711 CORO2BQ9UQ03 480 aa3.84□□□□□ -1.8
CLTC-209ENST00000498711 CCL27Q9Y4X3 112 aa3.84□□□□□ -1.8
CLTC-209ENST00000498711 KAT6AQ92794 2004 aa3.83□□□□□ -1.8
CLTC-209ENST00000498711 GREB1Q4ZG55 1949 aa3.83□□□□□ -1.8
CLTC-209ENST00000498711 TRBV5-3A0A0A0MS03 114 aa3.83□□□□□ -1.8
CLTC-209ENST00000498711 LOC100996750A0A140TA64 210 aa3.83□□□□□ -1.8
CLTC-209ENST00000498711 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.83□□□□□ -1.8
CLTC-209ENST00000498711 A0A1W2PPW3 197 aa3.83□□□□□ -1.8
CLTC-209ENST00000498711 MYBPHLA2RUH7 354 aa3.83□□□□□ -1.8
CLTC-209ENST00000498711 CCDC160A6NGH7 325 aa3.83□□□□□ -1.8
CLTC-209ENST00000498711 SAC3D1A6NKF1 404 aa3.83□□□□□ -1.8
CLTC-209ENST00000498711 M0QZQ0 153 aa3.83□□□□□ -1.8
CLTC-209ENST00000498711 PIP5K1BO14986 540 aa3.83□□□□□ -1.8
CLTC-209ENST00000498711 SEPT4O43236 478 aa3.83□□□□□ -1.8
CLTC-209ENST00000498711 DPM1O60762 260 aa3.83□□□□□ -1.8
CLTC-209ENST00000498711 UGT2B11O75310 529 aa3.83□□□□□ -1.8
CLTC-209ENST00000498711 ATP6V1G1O75348 118 aa3.83□□□□□ -1.8
CLTC-209ENST00000498711 RSL1D1O76021 490 aaKnown RBP3.83□□□□□ -1.8
CLTC-209ENST00000498711 ZBTB11O95625 1053 aaPredicted RBP3.83□□□□□ -1.8
CLTC-209ENST00000498711 ITGAMP11215 1152 aa3.83□□□□□ -1.8
CLTC-209ENST00000498711 PTPN2P17706 415 aa3.83□□□□□ -1.8
CLTC-209ENST00000498711 TCN1P20061 433 aaPredicted RBP3.83□□□□□ -1.8
CLTC-209ENST00000498711 CCNA2P20248 432 aa3.83□□□□□ -1.8
CLTC-209ENST00000498711 TGM1P22735 817 aa3.83□□□□□ -1.8
CLTC-209ENST00000498711 IGFBP6P24592 240 aaPredicted RBP3.83□□□□□ -1.8
CLTC-209ENST00000498711 AOAHP28039 575 aa3.83□□□□□ -1.8
CLTC-209ENST00000498711 CD6P30203 668 aa3.83□□□□□ -1.8
CLTC-209ENST00000498711 FLT3LGP49771 235 aa3.83□□□□□ -1.8
CLTC-209ENST00000498711 SERPINH1P50454 418 aaKnown RBP3.83□□□□□ -1.8
CLTC-209ENST00000498711 FOXA1P55317 472 aa3.83□□□□□ -1.8
CLTC-209ENST00000498711 CXCR4P61073 352 aa3.83□□□□□ -1.8
CLTC-209ENST00000498711 RAB1AP62820 205 aa3.83□□□□□ -1.8
CLTC-209ENST00000498711 PPP2R2BQ00005 443 aa3.83□□□□□ -1.8
CLTC-209ENST00000498711 LIPEQ05469 1076 aa3.83□□□□□ -1.8
CLTC-209ENST00000498711 AQP6Q13520 282 aa3.83□□□□□ -1.8
CLTC-209ENST00000498711 DAG1Q14118 895 aa3.83□□□□□ -1.8
CLTC-209ENST00000498711 C16orf72Q14CZ0 275 aa3.83□□□□□ -1.8
CLTC-209ENST00000498711 ACOX1Q15067 660 aa3.83□□□□□ -1.8
CLTC-209ENST00000498711 OR4D1Q15615 310 aa3.83□□□□□ -1.8
CLTC-209ENST00000498711 CTF1Q16619 201 aa3.83□□□□□ -1.8
CLTC-209ENST00000498711 VPS26BQ4G0F5 336 aa3.83□□□□□ -1.8
CLTC-209ENST00000498711 AASDHQ4L235 1098 aaPredicted RBP3.83□□□□□ -1.8
CLTC-209ENST00000498711 SLC44A4Q53GD3 710 aa3.83□□□□□ -1.8
CLTC-209ENST00000498711 CCDC157Q569K6 752 aa3.83□□□□□ -1.8
CLTC-209ENST00000498711 AGAP7PQ5VUJ5 663 aa3.83□□□□□ -1.8
CLTC-209ENST00000498711 ZNF470Q6ECI4 717 aa3.83□□□□□ -1.8
CLTC-209ENST00000498711 NCCRP1Q6ZVX7 275 aaPredicted RBP3.83□□□□□ -1.8
CLTC-209ENST00000498711 PTAR1Q7Z6K3 402 aaPredicted RBP3.83□□□□□ -1.8
CLTC-209ENST00000498711 CALHM3Q86XJ0 350 aa3.83□□□□□ -1.8
CLTC-209ENST00000498711 ZNF786Q8N393 782 aa3.83□□□□□ -1.8
CLTC-209ENST00000498711 SPATA6LQ8N4H0 392 aa3.83□□□□□ -1.8
CLTC-209ENST00000498711 SLC15A4Q8N697 577 aa3.83□□□□□ -1.8
CLTC-209ENST00000498711 SNX31Q8N9S9 440 aa3.83□□□□□ -1.8
CLTC-209ENST00000498711 DDHD1Q8NEL9 900 aa3.83□□□□□ -1.8
CLTC-209ENST00000498711 OR8J3Q8NGG0 315 aa3.83□□□□□ -1.8
CLTC-209ENST00000498711 NETO1Q8TDF5 533 aa3.83□□□□□ -1.8
CLTC-209ENST00000498711 ASB11Q8WXH4 323 aa3.83□□□□□ -1.8
CLTC-209ENST00000498711 RGMAQ96B86 450 aa3.83□□□□□ -1.8
CLTC-209ENST00000498711 SMARCD1Q96GM5 515 aa3.83□□□□□ -1.8
CLTC-209ENST00000498711 PDLIM5Q96HC4 596 aaKnown RBP3.83□□□□□ -1.8
CLTC-209ENST00000498711 PCED1BQ96HM7 432 aa3.83□□□□□ -1.8
CLTC-209ENST00000498711 SENP8Q96LD8 212 aa3.83□□□□□ -1.8
CLTC-209ENST00000498711 PPP1R36Q96LQ0 422 aa3.83□□□□□ -1.8
CLTC-209ENST00000498711 GLT1D1Q96MS3 346 aa3.83□□□□□ -1.8
CLTC-209ENST00000498711 ALPK1Q96QP1 1244 aa3.83□□□□□ -1.8
CLTC-209ENST00000498711 TRIB3Q96RU7 358 aa3.83□□□□□ -1.8
CLTC-209ENST00000498711 PPP1R16BQ96T49 567 aa3.83□□□□□ -1.8
CLTC-209ENST00000498711 ACBD6Q9BR61 282 aa3.83□□□□□ -1.8
CLTC-209ENST00000498711 KRTAP4-6Q9BYQ5 205 aa3.83□□□□□ -1.8
CLTC-209ENST00000498711 MAGIXQ9H6Y5 334 aa3.83□□□□□ -1.8
CLTC-209ENST00000498711 POLR1BQ9H9Y6 1135 aa3.83□□□□□ -1.8
CLTC-209ENST00000498711 ANKHQ9HCJ1 492 aa3.83□□□□□ -1.8
CLTC-209ENST00000498711 DDIT4Q9NX09 232 aa3.83□□□□□ -1.8
CLTC-209ENST00000498711 SMPD4Q9NXE4 827 aa3.83□□□□□ -1.8
CLTC-209ENST00000498711 PKD2L2Q9NZM6 624 aa3.83□□□□□ -1.8
CLTC-209ENST00000498711 FAF1Q9UNN5 650 aaPredicted RBP3.83□□□□□ -1.8
CLTC-209ENST00000498711 ERVW-1Q9UQF0 538 aa3.83□□□□□ -1.8
CLTC-209ENST00000498711 AP3M1Q9Y2T2 418 aa3.83□□□□□ -1.8
CLTC-209ENST00000498711 TMED5Q9Y3A6 229 aa3.83□□□□□ -1.8
CLTC-209ENST00000498711 CPQQ9Y646 472 aa3.83□□□□□ -1.8
CLTC-209ENST00000498711 HSPE1-MOB4S4R3N1 261 aa3.83□□□□□ -1.8
CLTC-209ENST00000498711 NPIPB8E9PQR5 432 aa3.83□□□□□ -1.8
CLTC-209ENST00000498711 ACOT7O00154 380 aa3.83□□□□□ -1.8
CLTC-209ENST00000498711 EI24O14681 340 aa3.83□□□□□ -1.8
CLTC-209ENST00000498711 GABARAPO95166 117 aa3.83□□□□□ -1.8
CLTC-209ENST00000498711 PCDH8O95206 1070 aa3.83□□□□□ -1.8
CLTC-209ENST00000498711 STAMBPO95630 424 aa3.83□□□□□ -1.8
CLTC-209ENST00000498711 LDLRP01130 860 aa3.83□□□□□ -1.8
CLTC-209ENST00000498711 SEMG1P04279 462 aa3.83□□□□□ -1.8
CLTC-209ENST00000498711 EIF2S1P05198 315 aaKnown RBP3.83□□□□□ -1.8
CLTC-209ENST00000498711 SMIM10L2AP0DMW4 78 aa3.83□□□□□ -1.8
CLTC-209ENST00000498711 SMIM10L2BP0DMW5 78 aa3.83□□□□□ -1.8
CLTC-209ENST00000498711 RAP2AP10114 183 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms