RNA–Protein interactions for RNA: ENST00000498058.1

PRKCB-209, Transcript of protein kinase C beta, humanhuman

TSL 3 BASIC

Gene PRKCB, Length 480 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-209ENST00000498058 PAK5Q9P286 719 aa17.73■□□□□ 0.43
PRKCB-209ENST00000498058 GALPQ9UBC7 116 aa17.73■□□□□ 0.43
PRKCB-209ENST00000498058 SLC39A10Q9ULF5 831 aa17.73■□□□□ 0.43
PRKCB-209ENST00000498058 COPG1Q9Y678 874 aaKnown RBP17.73■□□□□ 0.43
PRKCB-209ENST00000498058 HEATR5BQ9P2D3 2071 aa17.72■□□□□ 0.43
PRKCB-209ENST00000498058 F8W8V4 182 aa17.72■□□□□ 0.43
PRKCB-209ENST00000498058 DDAH2O95865 285 aa17.72■□□□□ 0.43
PRKCB-209ENST00000498058 RPN2P04844 631 aa17.72■□□□□ 0.43
PRKCB-209ENST00000498058 RPS3P23396 243 aaKnown RBP eCLIP17.72■□□□□ 0.43
PRKCB-209ENST00000498058 TTPAP49638 278 aa17.72■□□□□ 0.43
PRKCB-209ENST00000498058 VSX2P58304 361 aaPredicted RBP17.72■□□□□ 0.43
PRKCB-209ENST00000498058 GRM7Q14831 915 aa17.72■□□□□ 0.43
PRKCB-209ENST00000498058 ZC3H12BQ5HYM0 836 aaKnown RBP17.72■□□□□ 0.43
PRKCB-209ENST00000498058 WASHC2DQ5SRD0 308 aa17.72■□□□□ 0.43
PRKCB-209ENST00000498058 ZNF787Q6DD87 383 aa17.72■□□□□ 0.43
PRKCB-209ENST00000498058 IGFL2Q6UWQ7 119 aa17.72■□□□□ 0.43
PRKCB-209ENST00000498058 C4orf22Q6V702 233 aa17.72■□□□□ 0.43
PRKCB-209ENST00000498058 SYDE1Q6ZW31 735 aaPredicted RBP17.72■□□□□ 0.43
PRKCB-209ENST00000498058 KLHL7Q8IXQ5 586 aa17.72■□□□□ 0.43
PRKCB-209ENST00000498058 PARP9Q8IXQ6 854 aa17.72■□□□□ 0.43
PRKCB-209ENST00000498058 AMER2Q8N7J2 671 aa17.72■□□□□ 0.43
PRKCB-209ENST00000498058 MFSD3Q96ES6 412 aa17.72■□□□□ 0.43
PRKCB-209ENST00000498058 BIRC8Q96P09 236 aa17.72■□□□□ 0.43
PRKCB-209ENST00000498058 TSSK1BQ9BXA7 367 aa17.72■□□□□ 0.43
PRKCB-209ENST00000498058 PCYOX1Q9UHG3 505 aa17.72■□□□□ 0.43
PRKCB-209ENST00000498058 TSR3Q9UJK0 312 aaKnown RBP17.72■□□□□ 0.43
PRKCB-209ENST00000498058 ANAPC5Q9UJX4 755 aa17.72■□□□□ 0.43
PRKCB-209ENST00000498058 ITPR2Q14571 2701 aa17.72■□□□□ 0.43
PRKCB-209ENST00000498058 ZGRF1Q86YA3 2104 aa17.72■□□□□ 0.43
PRKCB-209ENST00000498058 CROCCQ5TZA2 2017 aa17.71■□□□□ 0.43
PRKCB-209ENST00000498058 A0A0J9YVX5 310 aa17.71■□□□□ 0.43
PRKCB-209ENST00000498058 TCRBV7S3A2A0A539 114 aa17.71■□□□□ 0.43
PRKCB-209ENST00000498058 ANKUB1A6NFN9 424 aa17.71■□□□□ 0.43
PRKCB-209ENST00000498058 TARM1B6A8C7 271 aa17.71■□□□□ 0.43
PRKCB-209ENST00000498058 GOLGA8KD6RF30 607 aa17.71■□□□□ 0.43
PRKCB-209ENST00000498058 GOLGA8TH3BQL2 631 aa17.71■□□□□ 0.43
PRKCB-209ENST00000498058 IPO13O94829 963 aaKnown RBP17.71■□□□□ 0.43
PRKCB-209ENST00000498058 EIF3BP55884 814 aaKnown RBP17.71■□□□□ 0.43
PRKCB-209ENST00000498058 DHX34Q14147 1143 aaKnown RBP17.71■□□□□ 0.43
PRKCB-209ENST00000498058 GBX1Q14549 363 aa17.71■□□□□ 0.43
PRKCB-209ENST00000498058 TMED2Q15363 201 aa17.71■□□□□ 0.43
PRKCB-209ENST00000498058 AARS2Q5JTZ9 985 aaKnown RBP17.71■□□□□ 0.43
PRKCB-209ENST00000498058 TCTE1Q5JU00 501 aa17.71■□□□□ 0.43
PRKCB-209ENST00000498058 CNSTQ6PJW8 725 aa17.71■□□□□ 0.43
PRKCB-209ENST00000498058 MAATS1Q7Z4T9 603 aa17.71■□□□□ 0.43
PRKCB-209ENST00000498058 OR2L3Q8NG85 312 aa17.71■□□□□ 0.43
PRKCB-209ENST00000498058 OR11G2Q8NGC1 345 aa17.71■□□□□ 0.43
PRKCB-209ENST00000498058 HMGCLL1Q8TB92 370 aa17.71■□□□□ 0.43
PRKCB-209ENST00000498058 ZUFSPQ96AP4 578 aa17.71■□□□□ 0.43
PRKCB-209ENST00000498058 RAD51AP1Q96B01 352 aa17.71■□□□□ 0.43
PRKCB-209ENST00000498058 FAM136AQ96C01 138 aa17.71■□□□□ 0.43
PRKCB-209ENST00000498058 DDX47Q9H0S4 455 aaKnown RBP17.71■□□□□ 0.43
PRKCB-209ENST00000498058 EIF2B3Q9NR50 452 aaKnown RBP17.71■□□□□ 0.43
PRKCB-209ENST00000498058 INTS7Q9NVH2 962 aaKnown RBP17.71■□□□□ 0.43
PRKCB-209ENST00000498058 SYBUQ9NX95 663 aa17.71■□□□□ 0.43
PRKCB-209ENST00000498058 GNPTGQ9UJJ9 305 aa17.71■□□□□ 0.43
PRKCB-209ENST00000498058 NOVA2Q9UNW9 492 aaKnown RBP17.71■□□□□ 0.43
PRKCB-209ENST00000498058 KLK4Q9Y5K2 254 aa17.71■□□□□ 0.43
PRKCB-209ENST00000498058 CRYBG3Q68DQ2 2970 aa17.7■□□□□ 0.42
PRKCB-209ENST00000498058 SVILO95425 2214 aa17.7■□□□□ 0.42
PRKCB-209ENST00000498058 NIPSNAP2O75323 286 aa17.7■□□□□ 0.42
PRKCB-209ENST00000498058 F7P08709 466 aaPredicted RBP17.7■□□□□ 0.42
PRKCB-209ENST00000498058 MGAT1P26572 445 aa17.7■□□□□ 0.42
PRKCB-209ENST00000498058 FMO4P31512 558 aa17.7■□□□□ 0.42
PRKCB-209ENST00000498058 PPARGP37231 505 aaPredicted RBP17.7■□□□□ 0.42
PRKCB-209ENST00000498058 KCNJ1P48048 391 aa17.7■□□□□ 0.42
PRKCB-209ENST00000498058 DR1Q01658 176 aa17.7■□□□□ 0.42
PRKCB-209ENST00000498058 C2orf54Q08AI8 447 aa17.7■□□□□ 0.42
PRKCB-209ENST00000498058 YOD1Q5VVQ6 348 aaPredicted RBP17.7■□□□□ 0.42
PRKCB-209ENST00000498058 FBXO42Q6P3S6 717 aa17.7■□□□□ 0.42
PRKCB-209ENST00000498058 TTC27Q6P3X3 843 aa17.7■□□□□ 0.42
PRKCB-209ENST00000498058 RNF44Q7L0R7 432 aa17.7■□□□□ 0.42
PRKCB-209ENST00000498058 TTC29Q8NA56 475 aaPredicted RBP17.7■□□□□ 0.42
PRKCB-209ENST00000498058 LPGAT1Q92604 370 aa17.7■□□□□ 0.42
PRKCB-209ENST00000498058 SLCO2A1Q92959 643 aa17.7■□□□□ 0.42
PRKCB-209ENST00000498058 NACC2Q96BF6 587 aa17.7■□□□□ 0.42
PRKCB-209ENST00000498058 C10orf90Q96M02 699 aa17.7■□□□□ 0.42
PRKCB-209ENST00000498058 PANX3Q96QZ0 392 aa17.7■□□□□ 0.42
PRKCB-209ENST00000498058 KRT12Q99456 494 aa17.7■□□□□ 0.42
PRKCB-209ENST00000498058 WDR77Q9BQA1 342 aaPredicted RBP17.7■□□□□ 0.42
PRKCB-209ENST00000498058 TRIM56Q9BRZ2 755 aaKnown RBP17.7■□□□□ 0.42
PRKCB-209ENST00000498058 ZC3H7BQ9UGR2 993 aaKnown RBP17.7■□□□□ 0.42
PRKCB-209ENST00000498058 CELSR2Q9HCU4 2923 aa17.69■□□□□ 0.42
PRKCB-209ENST00000498058 HYKKA2RU49 373 aa17.69■□□□□ 0.42
PRKCB-209ENST00000498058 E2F3O00716 465 aa17.69■□□□□ 0.42
PRKCB-209ENST00000498058 NDUFS3O75489 264 aa17.69■□□□□ 0.42
PRKCB-209ENST00000498058 KLHL18O94889 574 aa17.69■□□□□ 0.42
PRKCB-209ENST00000498058 PIM1P11309 404 aaPredicted RBP17.69■□□□□ 0.42
PRKCB-209ENST00000498058 BASP1P80723 227 aaKnown RBP17.69■□□□□ 0.42
PRKCB-209ENST00000498058 KLC1Q07866 573 aa17.69■□□□□ 0.42
PRKCB-209ENST00000498058 PPP1R7Q15435 360 aa17.69■□□□□ 0.42
PRKCB-209ENST00000498058 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.69■□□□□ 0.42
PRKCB-209ENST00000498058 OTOAQ7RTW8 1153 aa17.69■□□□□ 0.42
PRKCB-209ENST00000498058 MAMDC2Q7Z304 686 aaPredicted RBP17.69■□□□□ 0.42
PRKCB-209ENST00000498058 KCNMB4Q86W47 210 aa17.69■□□□□ 0.42
PRKCB-209ENST00000498058 PRSS58Q8IYP2 241 aa17.69■□□□□ 0.42
PRKCB-209ENST00000498058 PPP4R1Q8TF05 950 aa17.69■□□□□ 0.42
PRKCB-209ENST00000498058 SKA2Q8WVK7 121 aaPredicted RBP17.69■□□□□ 0.42
PRKCB-209ENST00000498058 TM9SF4Q92544 642 aa17.69■□□□□ 0.42
PRKCB-209ENST00000498058 C8orf44Q96CB5 159 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms