RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 LIX1Q8N485 282 aa12.72□□□□□ -0.37
GAPVD1-220ENST00000497580 TNIP3Q96KP6 325 aa12.72□□□□□ -0.37
GAPVD1-220ENST00000497580 AIFM2Q9BRQ8 373 aa12.72□□□□□ -0.37
GAPVD1-220ENST00000497580 C12orf10Q9HB07 376 aa12.72□□□□□ -0.37
GAPVD1-220ENST00000497580 ING3Q9NXR8 418 aa12.72□□□□□ -0.37
GAPVD1-220ENST00000497580 FABP12A6NFH5 140 aa12.72□□□□□ -0.37
GAPVD1-220ENST00000497580 SEC22BO75396 215 aa12.72□□□□□ -0.37
GAPVD1-220ENST00000497580 UGT2B17O75795 530 aa12.72□□□□□ -0.37
GAPVD1-220ENST00000497580 CTRB1P17538 263 aa12.72□□□□□ -0.37
GAPVD1-220ENST00000497580 FDXRP22570 491 aa12.72□□□□□ -0.37
GAPVD1-220ENST00000497580 DNAJA1P31689 397 aaKnown RBP12.72□□□□□ -0.37
GAPVD1-220ENST00000497580 NUDT1P36639 197 aa12.72□□□□□ -0.37
GAPVD1-220ENST00000497580 INPP1P49441 399 aa12.72□□□□□ -0.37
GAPVD1-220ENST00000497580 VEPH1Q14D04 833 aa12.72□□□□□ -0.37
GAPVD1-220ENST00000497580 ABRAXAS2Q15018 415 aa12.72□□□□□ -0.37
GAPVD1-220ENST00000497580 SPDYE7PQ495Y7 208 aa12.72□□□□□ -0.37
GAPVD1-220ENST00000497580 SETMARQ53H47 684 aaPredicted RBP12.72□□□□□ -0.37
GAPVD1-220ENST00000497580 XKR7Q5GH72 579 aa12.72□□□□□ -0.37
GAPVD1-220ENST00000497580 ZC3H12BQ5HYM0 836 aaKnown RBP12.72□□□□□ -0.37
GAPVD1-220ENST00000497580 KIAA0319Q5VV43 1072 aa12.72□□□□□ -0.37
GAPVD1-220ENST00000497580 KDM4DQ6B0I6 523 aa12.72□□□□□ -0.37
GAPVD1-220ENST00000497580 CTRB2Q6GPI1 263 aa12.72□□□□□ -0.37
GAPVD1-220ENST00000497580 MRNIPQ6NTE8 343 aa12.72□□□□□ -0.37
GAPVD1-220ENST00000497580 PAF1Q8N7H5 531 aa12.72□□□□□ -0.37
GAPVD1-220ENST00000497580 EFHBQ8N7U6 833 aa12.72□□□□□ -0.37
GAPVD1-220ENST00000497580 MCCC1Q96RQ3 725 aaPredicted RBP12.72□□□□□ -0.37
GAPVD1-220ENST00000497580 MGLLQ99685 303 aa12.72□□□□□ -0.37
GAPVD1-220ENST00000497580 CCM2Q9BSQ5 444 aa12.72□□□□□ -0.37
GAPVD1-220ENST00000497580 TTLL2Q9BWV7 592 aa12.72□□□□□ -0.37
GAPVD1-220ENST00000497580 C1QTNF7Q9BXJ2 289 aa12.72□□□□□ -0.37
GAPVD1-220ENST00000497580 NLKQ9UBE8 527 aa12.72□□□□□ -0.37
GAPVD1-220ENST00000497580 UXTQ9UBK9 157 aaPredicted RBP12.72□□□□□ -0.37
GAPVD1-220ENST00000497580 PCTPQ9UKL6 214 aa12.72□□□□□ -0.37
GAPVD1-220ENST00000497580 WWP2O00308 870 aa12.72□□□□□ -0.37
GAPVD1-220ENST00000497580 GFRA2O00451 464 aa12.72□□□□□ -0.37
GAPVD1-220ENST00000497580 C1QCP02747 245 aa12.72□□□□□ -0.37
GAPVD1-220ENST00000497580 FABP3P05413 133 aa12.72□□□□□ -0.37
GAPVD1-220ENST00000497580 PRR35P0CG20 571 aa12.72□□□□□ -0.37
GAPVD1-220ENST00000497580 FPR1P21462 350 aa12.72□□□□□ -0.37
GAPVD1-220ENST00000497580 ADRA1AP35348 466 aa12.72□□□□□ -0.37
GAPVD1-220ENST00000497580 RPS19P39019 145 aaKnown RBP12.72□□□□□ -0.37
GAPVD1-220ENST00000497580 BNC1Q01954 994 aa12.72□□□□□ -0.37
GAPVD1-220ENST00000497580 SEMA3BQ13214 749 aa12.72□□□□□ -0.37
GAPVD1-220ENST00000497580 KCTD2Q14681 263 aa12.72□□□□□ -0.37
GAPVD1-220ENST00000497580 TBCEQ15813 527 aaPredicted RBP12.72□□□□□ -0.37
GAPVD1-220ENST00000497580 C10orf62Q5T681 223 aaPredicted RBP12.72□□□□□ -0.37
GAPVD1-220ENST00000497580 CLEC20AQ6ZU45 233 aa12.72□□□□□ -0.37
GAPVD1-220ENST00000497580 GPR149Q86SP6 731 aa12.72□□□□□ -0.37
GAPVD1-220ENST00000497580 TLK2Q86UE8 772 aa12.72□□□□□ -0.37
GAPVD1-220ENST00000497580 NLGN4YQ8NFZ3 816 aaPredicted RBP12.72□□□□□ -0.37
GAPVD1-220ENST00000497580 FBLIM1Q8WUP2 373 aa12.72□□□□□ -0.37
GAPVD1-220ENST00000497580 TMEM203Q969S6 136 aa12.72□□□□□ -0.37
GAPVD1-220ENST00000497580 OLA1Q9NTK5 396 aaKnown RBP12.72□□□□□ -0.37
GAPVD1-220ENST00000497580 ALG5Q9Y673 324 aa12.72□□□□□ -0.37
GAPVD1-220ENST00000497580 PSIP1O75475 530 aaKnown RBP12.71□□□□□ -0.37
GAPVD1-220ENST00000497580 NPPAP01160 153 aa12.71□□□□□ -0.37
GAPVD1-220ENST00000497580 CD72P21854 359 aa12.71□□□□□ -0.37
GAPVD1-220ENST00000497580 SOX9P48436 509 aa12.71□□□□□ -0.37
GAPVD1-220ENST00000497580 C9orf57Q5W0N0 161 aa12.71□□□□□ -0.37
GAPVD1-220ENST00000497580 DOK6Q6PKX4 331 aa12.71□□□□□ -0.37
GAPVD1-220ENST00000497580 TAC4Q86UU9 113 aa12.71□□□□□ -0.37
GAPVD1-220ENST00000497580 GPSM1Q86YR5 675 aa12.71□□□□□ -0.37
GAPVD1-220ENST00000497580 TMC8Q8IU68 726 aa12.71□□□□□ -0.37
GAPVD1-220ENST00000497580 MSRB3Q8IXL7 192 aa12.71□□□□□ -0.37
GAPVD1-220ENST00000497580 INPP5KQ9BT40 448 aa12.71□□□□□ -0.37
GAPVD1-220ENST00000497580 MIA3Q5JRA6 1907 aa12.71□□□□□ -0.37
GAPVD1-220ENST00000497580 MATN3O15232 486 aa12.71□□□□□ -0.37
GAPVD1-220ENST00000497580 MAFKO60675 156 aa12.71□□□□□ -0.37
GAPVD1-220ENST00000497580 CDK1P06493 297 aa12.71□□□□□ -0.37
GAPVD1-220ENST00000497580 IL32P24001 234 aa12.71□□□□□ -0.37
GAPVD1-220ENST00000497580 KIR2DL3P43628 341 aa12.71□□□□□ -0.37
GAPVD1-220ENST00000497580 HYAL2Q12891 473 aa12.71□□□□□ -0.37
GAPVD1-220ENST00000497580 ZNF79Q15937 498 aa12.71□□□□□ -0.37
GAPVD1-220ENST00000497580 ZNF767PQ75MW2 155 aa12.71□□□□□ -0.37
GAPVD1-220ENST00000497580 CHPFQ8IZ52 775 aa12.71□□□□□ -0.37
GAPVD1-220ENST00000497580 SIDT2Q8NBJ9 832 aaKnown RBP12.71□□□□□ -0.37
GAPVD1-220ENST00000497580 RIT1Q92963 219 aa12.71□□□□□ -0.37
GAPVD1-220ENST00000497580 SIPA1Q96FS4 1042 aa12.71□□□□□ -0.37
GAPVD1-220ENST00000497580 CCDC115Q96NT0 180 aa12.71□□□□□ -0.37
GAPVD1-220ENST00000497580 TSSK3Q96PN8 268 aa12.71□□□□□ -0.37
GAPVD1-220ENST00000497580 OSMRQ99650 979 aa12.71□□□□□ -0.37
GAPVD1-220ENST00000497580 GDF15Q99988 308 aa12.71□□□□□ -0.37
GAPVD1-220ENST00000497580 DPH2Q9BQC3 489 aaPredicted RBP12.71□□□□□ -0.37
GAPVD1-220ENST00000497580 NUSAP1Q9BXS6 441 aaKnown RBP12.71□□□□□ -0.37
GAPVD1-220ENST00000497580 NXF3Q9H4D5 531 aaKnown RBP12.71□□□□□ -0.37
GAPVD1-220ENST00000497580 TFB2MQ9H5Q4 396 aaKnown RBP12.71□□□□□ -0.37
GAPVD1-220ENST00000497580 ELP3Q9H9T3 547 aa12.71□□□□□ -0.37
GAPVD1-220ENST00000497580 FARSBQ9NSD9 589 aaKnown RBP12.71□□□□□ -0.37
GAPVD1-220ENST00000497580 PSORS1C1Q9UIG5 152 aa12.71□□□□□ -0.37
GAPVD1-220ENST00000497580 NUP50Q9UKX7 468 aa12.71□□□□□ -0.37
GAPVD1-220ENST00000497580 CLCA1A8K7I4 914 aa12.71□□□□□ -0.38
GAPVD1-220ENST00000497580 NDUFS3O75489 264 aa12.71□□□□□ -0.38
GAPVD1-220ENST00000497580 GPX5O75715 221 aa12.71□□□□□ -0.38
GAPVD1-220ENST00000497580 CCNCP24863 283 aa12.71□□□□□ -0.38
GAPVD1-220ENST00000497580 SCNN1AP37088 669 aa12.71□□□□□ -0.38
GAPVD1-220ENST00000497580 BRCC3P46736 316 aa12.71□□□□□ -0.38
GAPVD1-220ENST00000497580 GRIK2Q13002 908 aa12.71□□□□□ -0.38
GAPVD1-220ENST00000497580 CDH18Q13634 790 aa12.71□□□□□ -0.38
GAPVD1-220ENST00000497580 KCTD20Q7Z5Y7 419 aa12.71□□□□□ -0.38
GAPVD1-220ENST00000497580 SNX20Q7Z614 316 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms