RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 FAM76AQ8TAV0 307 aa4.29□□□□□ -1.72
VPS36-206ENST00000497149 TMEM190Q8WZ59 177 aa4.29□□□□□ -1.72
VPS36-206ENST00000497149 RAD54LQ92698 747 aa4.29□□□□□ -1.72
VPS36-206ENST00000497149 CITED2Q99967 270 aaPredicted RBP4.29□□□□□ -1.72
VPS36-206ENST00000497149 THUMPD3Q9BV44 507 aaKnown RBP4.29□□□□□ -1.72
VPS36-206ENST00000497149 MTMR12Q9C0I1 747 aa4.29□□□□□ -1.72
VPS36-206ENST00000497149 MRGBPQ9NV56 204 aa4.29□□□□□ -1.72
VPS36-206ENST00000497149 GTF3C4Q9UKN8 822 aa4.29□□□□□ -1.72
VPS36-206ENST00000497149 POMT1Q9Y6A1 747 aa4.29□□□□□ -1.72
VPS36-206ENST00000497149 DISP3Q9P2K9 1392 aa4.28□□□□□ -1.72
VPS36-206ENST00000497149 HEG1Q9ULI3 1381 aa4.28□□□□□ -1.72
VPS36-206ENST00000497149 A0A1W2PPW3 197 aa4.28□□□□□ -1.72
VPS36-206ENST00000497149 FAM86B1E9PN63 330 aa4.28□□□□□ -1.72
VPS36-206ENST00000497149 O00370 1275 aa4.28□□□□□ -1.72
VPS36-206ENST00000497149 KLF11O14901 512 aa4.28□□□□□ -1.72
VPS36-206ENST00000497149 TRMUO75648 421 aaKnown RBP4.28□□□□□ -1.72
VPS36-206ENST00000497149 APOHP02749 345 aaPredicted RBP4.28□□□□□ -1.72
VPS36-206ENST00000497149 FAM86B2P0C5J1 330 aa4.28□□□□□ -1.72
VPS36-206ENST00000497149 DARSP14868 501 aaKnown RBP4.28□□□□□ -1.72
VPS36-206ENST00000497149 SP100P23497 879 aaPredicted RBP4.28□□□□□ -1.72
VPS36-206ENST00000497149 TLX1P31314 330 aaPredicted RBP4.28□□□□□ -1.72
VPS36-206ENST00000497149 MAGEA11P43364 429 aa4.28□□□□□ -1.72
VPS36-206ENST00000497149 NKX2-1P43699 371 aaPredicted RBP4.28□□□□□ -1.72
VPS36-206ENST00000497149 MFAP3P55082 362 aa4.28□□□□□ -1.72
VPS36-206ENST00000497149 POU5F1Q01860 360 aaKnown RBP4.28□□□□□ -1.72
VPS36-206ENST00000497149 TNK1Q13470 666 aa4.28□□□□□ -1.72
VPS36-206ENST00000497149 TUBB2AQ13885 445 aa4.28□□□□□ -1.72
VPS36-206ENST00000497149 RRS1Q15050 365 aaKnown RBP4.28□□□□□ -1.72
VPS36-206ENST00000497149 NONOQ15233 471 aaKnown RBP eCLIP4.28□□□□□ -1.72
VPS36-206ENST00000497149 ZNF876PQ49A33 203 aa4.28□□□□□ -1.72
VPS36-206ENST00000497149 GTDC1Q4AE62 458 aa4.28□□□□□ -1.72
VPS36-206ENST00000497149 LRRC73Q5JTD7 316 aa4.28□□□□□ -1.72
VPS36-206ENST00000497149 MPP7Q5T2T1 576 aa4.28□□□□□ -1.72
VPS36-206ENST00000497149 ARHGEF16Q5VV41 709 aa4.28□□□□□ -1.72
VPS36-206ENST00000497149 SHEQ5VZ18 495 aa4.28□□□□□ -1.72
VPS36-206ENST00000497149 ARHGAP17Q68EM7 881 aa4.28□□□□□ -1.72
VPS36-206ENST00000497149 NRARPQ7Z6K4 114 aa4.28□□□□□ -1.72
VPS36-206ENST00000497149 KIRREL3Q8IZU9 778 aa4.28□□□□□ -1.72
VPS36-206ENST00000497149 OR13C3Q8NGS6 347 aa4.28□□□□□ -1.72
VPS36-206ENST00000497149 HEXDCQ8WVB3 486 aa4.28□□□□□ -1.72
VPS36-206ENST00000497149 ERO1AQ96HE7 468 aa4.28□□□□□ -1.72
VPS36-206ENST00000497149 INTS14Q96SY0 518 aa4.28□□□□□ -1.72
VPS36-206ENST00000497149 INPP5KQ9BT40 448 aa4.28□□□□□ -1.72
VPS36-206ENST00000497149 TUBB2BQ9BVA1 445 aa4.28□□□□□ -1.72
VPS36-206ENST00000497149 SNX25Q9H3E2 840 aa4.28□□□□□ -1.72
VPS36-206ENST00000497149 ZWILCHQ9H900 591 aa4.28□□□□□ -1.72
VPS36-206ENST00000497149 CHST11Q9NPF2 352 aa4.28□□□□□ -1.72
VPS36-206ENST00000497149 ZNF71Q9NQZ8 489 aaPredicted RBP4.28□□□□□ -1.72
VPS36-206ENST00000497149 GRID1Q9ULK0 1009 aa4.28□□□□□ -1.72
VPS36-206ENST00000497149 GAB2Q9UQC2 676 aa4.28□□□□□ -1.72
VPS36-206ENST00000497149 TNNQ9UQP3 1299 aa4.28□□□□□ -1.72
VPS36-206ENST00000497149 CHKBQ9Y259 395 aa4.28□□□□□ -1.72
VPS36-206ENST00000497149 MSGN1A6NI15 193 aa4.27□□□□□ -1.73
VPS36-206ENST00000497149 HHLA1C9JL84 531 aa4.27□□□□□ -1.73
VPS36-206ENST00000497149 GRID2O43424 1007 aa4.27□□□□□ -1.73
VPS36-206ENST00000497149 GLRA3O75311 464 aa4.27□□□□□ -1.73
VPS36-206ENST00000497149 CDK2AP2O75956 126 aa4.27□□□□□ -1.73
VPS36-206ENST00000497149 AP2A2O94973 939 aa4.27□□□□□ -1.73
VPS36-206ENST00000497149 VIMP08670 466 aaKnown RBP4.27□□□□□ -1.73
VPS36-206ENST00000497149 CFC1BP0CG36 223 aa4.27□□□□□ -1.73
VPS36-206ENST00000497149 CFC1P0CG37 223 aa4.27□□□□□ -1.73
VPS36-206ENST00000497149 SPP1P10451 314 aa4.27□□□□□ -1.73
VPS36-206ENST00000497149 CEACAM1P13688 526 aa4.27□□□□□ -1.73
VPS36-206ENST00000497149 GNB3P16520 340 aa4.27□□□□□ -1.73
VPS36-206ENST00000497149 PTENP60484 403 aa4.27□□□□□ -1.73
VPS36-206ENST00000497149 GNB1P62873 340 aa4.27□□□□□ -1.73
VPS36-206ENST00000497149 SCN1BQ07699 218 aa4.27□□□□□ -1.73
VPS36-206ENST00000497149 TRAP1Q12931 704 aaKnown RBP4.27□□□□□ -1.73
VPS36-206ENST00000497149 SUSD4Q5VX71 490 aa4.27□□□□□ -1.73
VPS36-206ENST00000497149 UGT3A1Q6NUS8 523 aa4.27□□□□□ -1.73
VPS36-206ENST00000497149 ZNF329Q86UD4 541 aa4.27□□□□□ -1.73
VPS36-206ENST00000497149 SIX6OS1Q8N1H7 587 aa4.27□□□□□ -1.73
VPS36-206ENST00000497149 OR2T11Q8NH01 316 aa4.27□□□□□ -1.73
VPS36-206ENST00000497149 ST6GALNAC6Q969X2 333 aa4.27□□□□□ -1.73
VPS36-206ENST00000497149 LGALS12Q96DT0 336 aa4.27□□□□□ -1.73
VPS36-206ENST00000497149 DUX3Q96PT4 197 aa4.27□□□□□ -1.73
VPS36-206ENST00000497149 MAP3K3Q99759 626 aa4.27□□□□□ -1.73
VPS36-206ENST00000497149 FSD1Q9BTV5 496 aa4.27□□□□□ -1.73
VPS36-206ENST00000497149 PITPNM3Q9BZ71 974 aa4.27□□□□□ -1.73
VPS36-206ENST00000497149 ACTL8Q9H568 366 aa4.27□□□□□ -1.73
VPS36-206ENST00000497149 ATP13A3Q9H7F0 1226 aa4.27□□□□□ -1.73
VPS36-206ENST00000497149 GRPEL1Q9HAV7 217 aa4.27□□□□□ -1.73
VPS36-206ENST00000497149 C2orf42Q9NWW7 574 aa4.27□□□□□ -1.73
VPS36-206ENST00000497149 C5orf52A6NGY3 159 aa4.26□□□□□ -1.73
VPS36-206ENST00000497149 EPHB6O15197 1021 aa4.26□□□□□ -1.73
VPS36-206ENST00000497149 PRAF2O60831 178 aa4.26□□□□□ -1.73
VPS36-206ENST00000497149 PAK4O96013 591 aaPredicted RBP4.26□□□□□ -1.73
VPS36-206ENST00000497149 SERPING1P05155 500 aa4.26□□□□□ -1.73
VPS36-206ENST00000497149 HSP90AB1P08238 724 aaKnown RBP4.26□□□□□ -1.73
VPS36-206ENST00000497149 CASTP20810 708 aaKnown RBP4.26□□□□□ -1.73
VPS36-206ENST00000497149 LHCGRP22888 699 aa4.26□□□□□ -1.73
VPS36-206ENST00000497149 ALDH4A1P30038 563 aa4.26□□□□□ -1.73
VPS36-206ENST00000497149 GLIPR1P48060 266 aa4.26□□□□□ -1.73
VPS36-206ENST00000497149 TEAD2Q15562 447 aa4.26□□□□□ -1.73
VPS36-206ENST00000497149 CCDC6Q16204 474 aa4.26□□□□□ -1.73
VPS36-206ENST00000497149 TAZQ16635 292 aa4.26□□□□□ -1.73
VPS36-206ENST00000497149 TWISTNBQ3B726 338 aaPredicted RBP4.26□□□□□ -1.73
VPS36-206ENST00000497149 ALDH1L2Q3SY69 923 aa4.26□□□□□ -1.73
VPS36-206ENST00000497149 LBHQ53QV2 105 aaPredicted RBP4.26□□□□□ -1.73
VPS36-206ENST00000497149 FFAR4Q5NUL3 377 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms