RNA–Protein interactions for RNA: ENST00000496723.1

CD46-218, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-218ENST00000496723 ZNF486Q96H40 463 aaPredicted RBP3.23□□□□□ -1.89
CD46-218ENST00000496723 FAM71F1Q96KD3 344 aaPredicted RBP3.23□□□□□ -1.89
CD46-218ENST00000496723 LINC00615Q96LM1 132 aaPredicted RBP3.23□□□□□ -1.89
CD46-218ENST00000496723 USP28Q96RU2 1077 aa3.23□□□□□ -1.89
CD46-218ENST00000496723 KRT12Q99456 494 aa3.23□□□□□ -1.89
CD46-218ENST00000496723 CCDC3Q9BQI4 270 aa3.23□□□□□ -1.89
CD46-218ENST00000496723 PIGQQ9BRB3 760 aa3.23□□□□□ -1.89
CD46-218ENST00000496723 UBXN6Q9BZV1 441 aa3.23□□□□□ -1.89
CD46-218ENST00000496723 TLE6Q9H808 572 aa3.23□□□□□ -1.89
CD46-218ENST00000496723 CHST11Q9NPF2 352 aa3.23□□□□□ -1.89
CD46-218ENST00000496723 MAN2C1Q9NTJ4 1040 aa3.23□□□□□ -1.89
CD46-218ENST00000496723 C19orf25Q9UFG5 118 aaPredicted RBP3.23□□□□□ -1.89
CD46-218ENST00000496723 SYNDIG1LA6NDD5 238 aa3.22□□□□□ -1.89
CD46-218ENST00000496723 C15orf61A6NNL5 157 aa3.22□□□□□ -1.89
CD46-218ENST00000496723 PTGESO14684 152 aa3.22□□□□□ -1.89
CD46-218ENST00000496723 C22orf31O95567 290 aa3.22□□□□□ -1.89
CD46-218ENST00000496723 ACSL3O95573 720 aa3.22□□□□□ -1.89
CD46-218ENST00000496723 ADRB2P07550 413 aa3.22□□□□□ -1.89
CD46-218ENST00000496723 TRIM49P0CI25 452 aa3.22□□□□□ -1.89
CD46-218ENST00000496723 TRIM49CP0CI26 452 aa3.22□□□□□ -1.89
CD46-218ENST00000496723 CYP11B2P19099 503 aa3.22□□□□□ -1.89
CD46-218ENST00000496723 CD22P20273 847 aa3.22□□□□□ -1.89
CD46-218ENST00000496723 CYP2A7P20853 494 aa3.22□□□□□ -1.89
CD46-218ENST00000496723 LHCGRP22888 699 aa3.22□□□□□ -1.89
CD46-218ENST00000496723 SP100P23497 879 aaPredicted RBP3.22□□□□□ -1.89
CD46-218ENST00000496723 MC5RP33032 325 aa3.22□□□□□ -1.89
CD46-218ENST00000496723 ASCL1P50553 236 aa3.22□□□□□ -1.89
CD46-218ENST00000496723 POLR2LP62875 67 aaKnown RBP3.22□□□□□ -1.89
CD46-218ENST00000496723 CALD1Q05682 793 aaKnown RBP3.22□□□□□ -1.89
CD46-218ENST00000496723 TMEM266Q2M3C6 531 aa3.22□□□□□ -1.89
CD46-218ENST00000496723 ERMARDQ5T6L9 678 aa3.22□□□□□ -1.89
CD46-218ENST00000496723 NAA16Q6N069 864 aaPredicted RBP3.22□□□□□ -1.89
CD46-218ENST00000496723 DET1Q7L5Y6 550 aa3.22□□□□□ -1.89
CD46-218ENST00000496723 LRRTM1Q86UE6 522 aa3.22□□□□□ -1.89
CD46-218ENST00000496723 NDUFAF2Q8N183 169 aa3.22□□□□□ -1.89
CD46-218ENST00000496723 OR10Q1Q8NGQ4 319 aa3.22□□□□□ -1.89
CD46-218ENST00000496723 OR6S1Q8NH40 331 aa3.22□□□□□ -1.89
CD46-218ENST00000496723 ZNF519Q8TB69 540 aa3.22□□□□□ -1.89
CD46-218ENST00000496723 ZNRF4Q8WWF5 429 aa3.22□□□□□ -1.89
CD46-218ENST00000496723 CENPTQ96BT3 561 aa3.22□□□□□ -1.89
CD46-218ENST00000496723 ARSGQ96EG1 525 aa3.22□□□□□ -1.89
CD46-218ENST00000496723 FEVQ99581 238 aa3.22□□□□□ -1.89
CD46-218ENST00000496723 CPNE1Q99829 537 aa3.22□□□□□ -1.89
CD46-218ENST00000496723 RBM4BQ9BQ04 359 aaKnown RBP3.22□□□□□ -1.89
CD46-218ENST00000496723 SLF1Q9BQI6 1058 aa3.22□□□□□ -1.89
CD46-218ENST00000496723 PRRG4Q9BZD6 226 aa3.22□□□□□ -1.89
CD46-218ENST00000496723 MTMR12Q9C0I1 747 aa3.22□□□□□ -1.89
CD46-218ENST00000496723 ZMYND12Q9H0C1 365 aa3.22□□□□□ -1.89
CD46-218ENST00000496723 Q9H8V8 135 aa3.22□□□□□ -1.89
CD46-218ENST00000496723 CDH20Q9HBT6 801 aa3.22□□□□□ -1.89
CD46-218ENST00000496723 SPHK2Q9NRA0 654 aa3.22□□□□□ -1.89
CD46-218ENST00000496723 PANK4Q9NVE7 773 aa3.22□□□□□ -1.89
CD46-218ENST00000496723 MAN1B1Q9UKM7 699 aa3.22□□□□□ -1.89
CD46-218ENST00000496723 R4GN57 208 aa3.22□□□□□ -1.89
CD46-218ENST00000496723 A0A1W2PR80 420 aa3.21□□□□□ -1.9
CD46-218ENST00000496723 FPGTO14772 594 aa3.21□□□□□ -1.9
CD46-218ENST00000496723 VTNP04004 478 aa3.21□□□□□ -1.9
CD46-218ENST00000496723 ATP5BP06576 529 aaKnown RBP3.21□□□□□ -1.9
CD46-218ENST00000496723 ZSCAN5DPP0CG00 497 aa3.21□□□□□ -1.9
CD46-218ENST00000496723 SAGP10523 405 aaPredicted RBP3.21□□□□□ -1.9
CD46-218ENST00000496723 IL11P20809 199 aa3.21□□□□□ -1.9
CD46-218ENST00000496723 AZGP1P25311 298 aaKnown RBP3.21□□□□□ -1.9
CD46-218ENST00000496723 ALDH3A2P51648 485 aa3.21□□□□□ -1.9
CD46-218ENST00000496723 VAMP7P51809 220 aa3.21□□□□□ -1.9
CD46-218ENST00000496723 AIMP1Q12904 312 aaKnown RBP3.21□□□□□ -1.9
CD46-218ENST00000496723 PRPF4BQ13523 1007 aaKnown RBP3.21□□□□□ -1.9
CD46-218ENST00000496723 NECTIN1Q15223 517 aa3.21□□□□□ -1.9
CD46-218ENST00000496723 CRY2Q49AN0 593 aa3.21□□□□□ -1.9
CD46-218ENST00000496723 ARMC4Q5T2S8 1044 aa3.21□□□□□ -1.9
CD46-218ENST00000496723 KRT39Q6A163 491 aa3.21□□□□□ -1.9
CD46-218ENST00000496723 DOK6Q6PKX4 331 aa3.21□□□□□ -1.9
CD46-218ENST00000496723 PCGF5Q86SE9 256 aa3.21□□□□□ -1.9
CD46-218ENST00000496723 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.21□□□□□ -1.9
CD46-218ENST00000496723 MAPK15Q8TD08 544 aa3.21□□□□□ -1.9
CD46-218ENST00000496723 APOBEC4Q8WW27 367 aaKnown RBP3.21□□□□□ -1.9
CD46-218ENST00000496723 SLCO2A1Q92959 643 aa3.21□□□□□ -1.9
CD46-218ENST00000496723 C4orf45Q96LM5 186 aa3.21□□□□□ -1.9
CD46-218ENST00000496723 NSMCE3Q96MG7 304 aa3.21□□□□□ -1.9
CD46-218ENST00000496723 NKX3-1Q99801 234 aaPredicted RBP3.21□□□□□ -1.9
CD46-218ENST00000496723 PKP2Q99959 881 aa3.21□□□□□ -1.9
CD46-218ENST00000496723 UPF3AQ9H1J1 476 aaKnown RBP3.21□□□□□ -1.9
CD46-218ENST00000496723 A0A1W2PPK0 400 aa3.2□□□□□ -1.9
CD46-218ENST00000496723 MEX3AA1L020 520 aaKnown RBP3.2□□□□□ -1.9
CD46-218ENST00000496723 KPNA7A9QM74 516 aa3.2□□□□□ -1.9
CD46-218ENST00000496723 SNURFLB1AK76 121 aa3.2□□□□□ -1.9
CD46-218ENST00000496723 CLDN4O14493 209 aa3.2□□□□□ -1.9
CD46-218ENST00000496723 SLCO2B1O94956 709 aa3.2□□□□□ -1.9
CD46-218ENST00000496723 CELF2O95319 508 aaKnown RBP3.2□□□□□ -1.9
CD46-218ENST00000496723 CD27P26842 260 aa3.2□□□□□ -1.9
CD46-218ENST00000496723 HNF4AP41235 474 aa3.2□□□□□ -1.9
CD46-218ENST00000496723 RAD52P43351 418 aa3.2□□□□□ -1.9
CD46-218ENST00000496723 HUNKP57058 714 aa3.2□□□□□ -1.9
CD46-218ENST00000496723 CSNK2BP67870 215 aa3.2□□□□□ -1.9
CD46-218ENST00000496723 GUCY2DQ02846 1103 aa3.2□□□□□ -1.9
CD46-218ENST00000496723 RBPJQ06330 500 aa3.2□□□□□ -1.9
CD46-218ENST00000496723 TOMM20Q15388 145 aa3.2□□□□□ -1.9
CD46-218ENST00000496723 EXT1Q16394 746 aa3.2□□□□□ -1.9
CD46-218ENST00000496723 ZNF74Q16587 644 aa3.2□□□□□ -1.9
CD46-218ENST00000496723 TCTE1Q5JU00 501 aa3.2□□□□□ -1.9
CD46-218ENST00000496723 LYSMD4Q5XG99 296 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms