RNA–Protein interactions for RNA: ENST00000494938.2

SCAP-213, Transcript of SREBF chaperone, humanhuman

TSL 4

Gene SCAP, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-213ENST00000494938 RPA3P35244 121 aaPredicted RBP13.78□□□□□ -0.2
SCAP-213ENST00000494938 ZNF460Q14592 562 aa13.78□□□□□ -0.2
SCAP-213ENST00000494938 PTCHD3Q3KNS1 767 aa13.78□□□□□ -0.2
SCAP-213ENST00000494938 KBTBD12Q3ZCT8 623 aa13.78□□□□□ -0.2
SCAP-213ENST00000494938 CRTC2Q53ET0 693 aaPredicted RBP13.78□□□□□ -0.2
SCAP-213ENST00000494938 ZC3H12BQ5HYM0 836 aaKnown RBP13.78□□□□□ -0.2
SCAP-213ENST00000494938 ATP1A1-AS1Q5TC04 95 aa13.78□□□□□ -0.2
SCAP-213ENST00000494938 FRMPD2BQ6IN97 320 aa13.78□□□□□ -0.2
SCAP-213ENST00000494938 RHBDD2Q6NTF9 364 aa13.78□□□□□ -0.2
SCAP-213ENST00000494938 TLDC1Q6P9B6 456 aa13.78□□□□□ -0.2
SCAP-213ENST00000494938 MBOAT1Q6ZNC8 495 aa13.78□□□□□ -0.2
SCAP-213ENST00000494938 PAQR7Q86WK9 346 aa13.78□□□□□ -0.2
SCAP-213ENST00000494938 SYTL1Q8IYJ3 562 aa13.78□□□□□ -0.2
SCAP-213ENST00000494938 EXD3Q8N9H8 876 aa13.78□□□□□ -0.2
SCAP-213ENST00000494938 FBF1Q8TES7 1133 aa13.78□□□□□ -0.2
SCAP-213ENST00000494938 EXTL1Q92935 676 aa13.78□□□□□ -0.2
SCAP-213ENST00000494938 CLIP3Q96DZ5 547 aa13.78□□□□□ -0.2
SCAP-213ENST00000494938 VPS39Q96JC1 886 aa13.78□□□□□ -0.2
SCAP-213ENST00000494938 CPNE1Q99829 537 aa13.78□□□□□ -0.2
SCAP-213ENST00000494938 PLCD4Q9BRC7 762 aa13.78□□□□□ -0.2
SCAP-213ENST00000494938 DPH7Q9BTV6 452 aa13.78□□□□□ -0.2
SCAP-213ENST00000494938 SYNPO2LQ9H987 977 aa13.78□□□□□ -0.2
SCAP-213ENST00000494938 KCND3Q9UK17 655 aa13.78□□□□□ -0.2
SCAP-213ENST00000494938 CFAP46Q8IYW2 2715 aa13.77□□□□□ -0.2
SCAP-213ENST00000494938 LOC105369274A0A096LPK9 316 aa13.77□□□□□ -0.21
SCAP-213ENST00000494938 LOC102723532A0A0G2JNH3 316 aa13.77□□□□□ -0.21
SCAP-213ENST00000494938 ZSCAN9O15535 394 aaPredicted RBP13.77□□□□□ -0.21
SCAP-213ENST00000494938 SRPX2O60687 465 aaPredicted RBP13.77□□□□□ -0.21
SCAP-213ENST00000494938 CREG1O75629 220 aa13.77□□□□□ -0.21
SCAP-213ENST00000494938 FAM155BO75949 473 aa13.77□□□□□ -0.21
SCAP-213ENST00000494938 HBQ1P09105 142 aa13.77□□□□□ -0.21
SCAP-213ENST00000494938 RAB40ALP0C0E4 278 aa13.77□□□□□ -0.21
SCAP-213ENST00000494938 PRKAR1AP10644 381 aa13.77□□□□□ -0.21
SCAP-213ENST00000494938 ECHS1P30084 290 aa13.77□□□□□ -0.21
SCAP-213ENST00000494938 POU4F1Q01851 419 aa13.77□□□□□ -0.21
SCAP-213ENST00000494938 ILF2Q12905 390 aaKnown RBP13.77□□□□□ -0.21
SCAP-213ENST00000494938 SP140Q13342 867 aa13.77□□□□□ -0.21
SCAP-213ENST00000494938 TSTA3Q13630 321 aaPredicted RBP13.77□□□□□ -0.21
SCAP-213ENST00000494938 UBAP2Q5T6F2 1119 aaKnown RBP13.77□□□□□ -0.21
SCAP-213ENST00000494938 C1orf189Q5VU69 101 aa13.77□□□□□ -0.21
SCAP-213ENST00000494938 ICE2Q659A1 982 aa13.77□□□□□ -0.21
SCAP-213ENST00000494938 ZNF425Q6IV72 752 aa13.77□□□□□ -0.21
SCAP-213ENST00000494938 AGTRAPQ6RW13 159 aa13.77□□□□□ -0.21
SCAP-213ENST00000494938 OR4N4Q8N0Y3 316 aa13.77□□□□□ -0.21
SCAP-213ENST00000494938 IFT81Q8WYA0 676 aa13.77□□□□□ -0.21
SCAP-213ENST00000494938 SLC39A7Q92504 469 aa13.77□□□□□ -0.21
SCAP-213ENST00000494938 CDKL2Q92772 493 aa13.77□□□□□ -0.21
SCAP-213ENST00000494938 GBP5Q96PP8 586 aa13.77□□□□□ -0.21
SCAP-213ENST00000494938 ACTL8Q9H568 366 aa13.77□□□□□ -0.21
SCAP-213ENST00000494938 PIEZO2Q9H5I5 2752 aa13.77□□□□□ -0.21
SCAP-213ENST00000494938 CAB39LQ9H9S4 337 aa13.77□□□□□ -0.21
SCAP-213ENST00000494938 MRPS30Q9NP92 439 aaKnown RBP13.77□□□□□ -0.21
SCAP-213ENST00000494938 STARD5Q9NSY2 213 aa13.77□□□□□ -0.21
SCAP-213ENST00000494938 DHCR7Q9UBM7 475 aaKnown RBP13.77□□□□□ -0.21
SCAP-213ENST00000494938 TAC3Q9UHF0 121 aa13.77□□□□□ -0.21
SCAP-213ENST00000494938 FITM1A5D6W6 292 aa13.76□□□□□ -0.21
SCAP-213ENST00000494938 TK2O00142 265 aa13.76□□□□□ -0.21
SCAP-213ENST00000494938 CDC7O00311 574 aa13.76□□□□□ -0.21
SCAP-213ENST00000494938 ZNF37AP17032 561 aaPredicted RBP13.76□□□□□ -0.21
SCAP-213ENST00000494938 ITGAXP20702 1163 aa13.76□□□□□ -0.21
SCAP-213ENST00000494938 GP5P40197 560 aa13.76□□□□□ -0.21
SCAP-213ENST00000494938 RPS18P62269 152 aaKnown RBP13.76□□□□□ -0.21
SCAP-213ENST00000494938 RPS15P62841 145 aaKnown RBP13.76□□□□□ -0.21
SCAP-213ENST00000494938 ABATP80404 500 aa13.76□□□□□ -0.21
SCAP-213ENST00000494938 NFKB2Q00653 900 aa13.76□□□□□ -0.21
SCAP-213ENST00000494938 MC1RQ01726 317 aa13.76□□□□□ -0.21
SCAP-213ENST00000494938 CDC20Q12834 499 aa13.76□□□□□ -0.21
SCAP-213ENST00000494938 NAE1Q13564 534 aa13.76□□□□□ -0.21
SCAP-213ENST00000494938 ERV3-1Q14264 604 aa13.76□□□□□ -0.21
SCAP-213ENST00000494938 PPP1R3AQ16821 1122 aa13.76□□□□□ -0.21
SCAP-213ENST00000494938 TAF1BQ53T94 588 aaPredicted RBP13.76□□□□□ -0.21
SCAP-213ENST00000494938 WASHC2DQ5SRD0 308 aa13.76□□□□□ -0.21
SCAP-213ENST00000494938 GRTP1Q5TC63 336 aa13.76□□□□□ -0.21
SCAP-213ENST00000494938 FAM69BQ5VUD6 431 aa13.76□□□□□ -0.21
SCAP-213ENST00000494938 C16orf46Q6P387 395 aa13.76□□□□□ -0.21
SCAP-213ENST00000494938 FAM198BQ6UWH4 519 aa13.76□□□□□ -0.21
SCAP-213ENST00000494938 SBSNQ6UWP8 590 aa13.76□□□□□ -0.21
SCAP-213ENST00000494938 RNF44Q7L0R7 432 aa13.76□□□□□ -0.21
SCAP-213ENST00000494938 RELL1Q8IUW5 271 aa13.76□□□□□ -0.21
SCAP-213ENST00000494938 CTAGE3PQ8IX95 158 aa13.76□□□□□ -0.21
SCAP-213ENST00000494938 NKAPQ8N5F7 415 aaKnown RBP13.76□□□□□ -0.21
SCAP-213ENST00000494938 PPM1NQ8N819 430 aa13.76□□□□□ -0.21
SCAP-213ENST00000494938 CEP112Q8N8E3 955 aa13.76□□□□□ -0.21
SCAP-213ENST00000494938 ANKRD7Q92527 254 aa13.76□□□□□ -0.21
SCAP-213ENST00000494938 GPR22Q99680 433 aa13.76□□□□□ -0.21
SCAP-213ENST00000494938 RBBP8Q99708 897 aa13.76□□□□□ -0.21
SCAP-213ENST00000494938 DPH2Q9BQC3 489 aaPredicted RBP13.76□□□□□ -0.21
SCAP-213ENST00000494938 SELENOSQ9BQE4 189 aa13.76□□□□□ -0.21
SCAP-213ENST00000494938 SGPP1Q9BX95 441 aa13.76□□□□□ -0.21
SCAP-213ENST00000494938 NLNQ9BYT8 704 aa13.76□□□□□ -0.21
SCAP-213ENST00000494938 FAM129AQ9BZQ8 928 aa13.76□□□□□ -0.21
SCAP-213ENST00000494938 SEMA4CQ9C0C4 833 aa13.76□□□□□ -0.21
SCAP-213ENST00000494938 ATG10Q9H0Y0 220 aa13.76□□□□□ -0.21
SCAP-213ENST00000494938 POPDC3Q9HBV1 291 aa13.76□□□□□ -0.21
SCAP-213ENST00000494938 SLC22A11Q9NSA0 550 aa13.76□□□□□ -0.21
SCAP-213ENST00000494938 ABCF3Q9NUQ8 709 aa13.76□□□□□ -0.21
SCAP-213ENST00000494938 ANKMY1Q9P2S6 941 aa13.76□□□□□ -0.21
SCAP-213ENST00000494938 SNX7Q9UNH6 387 aa13.76□□□□□ -0.21
SCAP-213ENST00000494938 NOVA2Q9UNW9 492 aaKnown RBP13.76□□□□□ -0.21
SCAP-213ENST00000494938 A0A0J9YVX5 310 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms