RNA–Protein interactions for RNA: ENST00000494649.5

APTX-230, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 2,099 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-230ENST00000494649 ULBP3Q9BZM4 244 aa10.7□□□□□ -0.7
APTX-230ENST00000494649 SYNPO2LQ9H987 977 aa10.7□□□□□ -0.7
APTX-230ENST00000494649 CPSF2Q9P2I0 782 aaKnown RBP10.7□□□□□ -0.7
APTX-230ENST00000494649 SLC22A14Q9Y267 594 aa10.7□□□□□ -0.7
APTX-230ENST00000494649 ASB1Q9Y576 335 aa10.7□□□□□ -0.7
APTX-230ENST00000494649 A0A087X1B8 175 aa10.69□□□□□ -0.7
APTX-230ENST00000494649 CDRT15L2A8MXV6 281 aa10.69□□□□□ -0.7
APTX-230ENST00000494649 CTSVO60911 334 aa10.69□□□□□ -0.7
APTX-230ENST00000494649 RFPL1O75677 317 aa10.69□□□□□ -0.7
APTX-230ENST00000494649 EIF2S1P05198 315 aaKnown RBP10.69□□□□□ -0.7
APTX-230ENST00000494649 ANXA5P08758 320 aa10.69□□□□□ -0.7
APTX-230ENST00000494649 KRT15P19012 456 aa10.69□□□□□ -0.7
APTX-230ENST00000494649 CMPK1P30085 196 aa10.69□□□□□ -0.7
APTX-230ENST00000494649 HSPA7P48741 367 aa10.69□□□□□ -0.7
APTX-230ENST00000494649 CSRP3P50461 194 aa10.69□□□□□ -0.7
APTX-230ENST00000494649 ATP6V0D1P61421 351 aa10.69□□□□□ -0.7
APTX-230ENST00000494649 ARHGAP19Q14CB8 494 aa10.69□□□□□ -0.7
APTX-230ENST00000494649 TMTC4Q5T4D3 741 aa10.69□□□□□ -0.7
APTX-230ENST00000494649 PPP1R3BQ86XI6 285 aa10.69□□□□□ -0.7
APTX-230ENST00000494649 OR1L3Q8NH93 324 aa10.69□□□□□ -0.7
APTX-230ENST00000494649 HMGCLL1Q8TB92 370 aa10.69□□□□□ -0.7
APTX-230ENST00000494649 CAVIN3Q969G5 261 aa10.69□□□□□ -0.7
APTX-230ENST00000494649 KIAA1191Q96A73 305 aa10.69□□□□□ -0.7
APTX-230ENST00000494649 ZNF501Q96CX3 271 aaPredicted RBP10.69□□□□□ -0.7
APTX-230ENST00000494649 OR4K3Q96R72 315 aa10.69□□□□□ -0.7
APTX-230ENST00000494649 NMRAL1Q9HBL8 299 aa10.69□□□□□ -0.7
APTX-230ENST00000494649 WWOXQ9NZC7 414 aa10.69□□□□□ -0.7
APTX-230ENST00000494649 SEMA5BQ9P283 1151 aa10.69□□□□□ -0.7
APTX-230ENST00000494649 RARRES3Q9UL19 164 aa10.69□□□□□ -0.7
APTX-230ENST00000494649 PLAAQ9Y263 795 aa10.69□□□□□ -0.7
APTX-230ENST00000494649 BTRCQ9Y297 605 aa10.69□□□□□ -0.7
APTX-230ENST00000494649 ACACAQ13085 2346 aa10.69□□□□□ -0.7
APTX-230ENST00000494649 MAP1BP46821 2468 aaKnown RBP10.69□□□□□ -0.7
APTX-230ENST00000494649 IQANK1A0A1B0GTG1 560 aa10.69□□□□□ -0.7
APTX-230ENST00000494649 FEZF1A0PJY2 475 aa10.69□□□□□ -0.7
APTX-230ENST00000494649 ZNF839A8K0R7 811 aa10.69□□□□□ -0.7
APTX-230ENST00000494649 B4E171 279 aa10.69□□□□□ -0.7
APTX-230ENST00000494649 TK2O00142 265 aa10.69□□□□□ -0.7
APTX-230ENST00000494649 MAP3K7O43318 606 aa10.69□□□□□ -0.7
APTX-230ENST00000494649 KIAA0754O94854 1291 aa10.69□□□□□ -0.7
APTX-230ENST00000494649 WDR47O94967 919 aa10.69□□□□□ -0.7
APTX-230ENST00000494649 KLHL2O95198 593 aa10.69□□□□□ -0.7
APTX-230ENST00000494649 ENO2P09104 434 aaPredicted RBP10.69□□□□□ -0.7
APTX-230ENST00000494649 PYGBP11216 843 aa10.69□□□□□ -0.7
APTX-230ENST00000494649 CDH1P12830 882 aa10.69□□□□□ -0.7
APTX-230ENST00000494649 TSPAN7P41732 249 aa10.69□□□□□ -0.7
APTX-230ENST00000494649 AGTR2P50052 363 aa10.69□□□□□ -0.7
APTX-230ENST00000494649 AP1S2P56377 157 aa10.69□□□□□ -0.7
APTX-230ENST00000494649 FAM83EQ2M2I3 478 aa10.69□□□□□ -0.7
APTX-230ENST00000494649 CATSPEREQ5SY80 951 aa10.69□□□□□ -0.7
APTX-230ENST00000494649 LGSNQ5TDP6 509 aa10.69□□□□□ -0.7
APTX-230ENST00000494649 FRMPD2BQ6IN97 320 aa10.69□□□□□ -0.7
APTX-230ENST00000494649 CAPN13Q6MZZ7 669 aaPredicted RBP10.69□□□□□ -0.7
APTX-230ENST00000494649 C16orf46Q6P387 395 aa10.69□□□□□ -0.7
APTX-230ENST00000494649 TMEM126BQ8IUX1 230 aa10.69□□□□□ -0.7
APTX-230ENST00000494649 LSMEM2Q8N112 164 aa10.69□□□□□ -0.7
APTX-230ENST00000494649 DTWD1Q8N5C7 304 aa10.69□□□□□ -0.7
APTX-230ENST00000494649 STAG3L4Q8TBR4 150 aa10.69□□□□□ -0.7
APTX-230ENST00000494649 FGF11Q92914 225 aa10.69□□□□□ -0.7
APTX-230ENST00000494649 RHBDF1Q96CC6 855 aa10.69□□□□□ -0.7
APTX-230ENST00000494649 FBXL8Q96CD0 374 aa10.69□□□□□ -0.7
APTX-230ENST00000494649 TCTN2Q96GX1 697 aa10.69□□□□□ -0.7
APTX-230ENST00000494649 TMEM79Q9BSE2 394 aa10.69□□□□□ -0.7
APTX-230ENST00000494649 SPRTNQ9H040 489 aaPredicted RBP10.69□□□□□ -0.7
APTX-230ENST00000494649 C12orf65Q9H3J6 166 aaKnown RBP10.69□□□□□ -0.7
APTX-230ENST00000494649 ACSS2Q9NR19 701 aa10.69□□□□□ -0.7
APTX-230ENST00000494649 AHCTF1Q8WYP5 2266 aa10.68□□□□□ -0.7
APTX-230ENST00000494649 SDK2Q58EX2 2172 aa10.68□□□□□ -0.7
APTX-230ENST00000494649 LOC105369274A0A096LPK9 316 aa10.68□□□□□ -0.7
APTX-230ENST00000494649 LOC102723532A0A0G2JNH3 316 aa10.68□□□□□ -0.7
APTX-230ENST00000494649 LRRC14BA6NHZ5 514 aa10.68□□□□□ -0.7
APTX-230ENST00000494649 TAPBPO15533 448 aa10.68□□□□□ -0.7
APTX-230ENST00000494649 STK17BO94768 372 aa10.68□□□□□ -0.7
APTX-230ENST00000494649 CAPNS1P04632 268 aa10.68□□□□□ -0.7
APTX-230ENST00000494649 NPPBP16860 134 aa10.68□□□□□ -0.7
APTX-230ENST00000494649 CNTFP26441 200 aa10.68□□□□□ -0.7
APTX-230ENST00000494649 HSD17B2P37059 387 aa10.68□□□□□ -0.7
APTX-230ENST00000494649 EIF2S3P41091 472 aaKnown RBP10.68□□□□□ -0.7
APTX-230ENST00000494649 MAGEA12P43365 314 aa10.68□□□□□ -0.7
APTX-230ENST00000494649 ACY1Q03154 408 aa10.68□□□□□ -0.7
APTX-230ENST00000494649 PRDX1Q06830 199 aaKnown RBP10.68□□□□□ -0.7
APTX-230ENST00000494649 ILF2Q12905 390 aaKnown RBP10.68□□□□□ -0.7
APTX-230ENST00000494649 CEACAM20Q6UY09 585 aa10.68□□□□□ -0.7
APTX-230ENST00000494649 VASH2Q86V25 355 aa10.68□□□□□ -0.7
APTX-230ENST00000494649 KMT5CQ86Y97 462 aa10.68□□□□□ -0.7
APTX-230ENST00000494649 OR4N4Q8N0Y3 316 aa10.68□□□□□ -0.7
APTX-230ENST00000494649 C4orf33Q8N1A6 199 aa10.68□□□□□ -0.7
APTX-230ENST00000494649 ZNF655Q8N720 491 aaPredicted RBP10.68□□□□□ -0.7
APTX-230ENST00000494649 MZB1Q8WU39 189 aa10.68□□□□□ -0.7
APTX-230ENST00000494649 GPR78Q96P69 363 aa10.68□□□□□ -0.7
APTX-230ENST00000494649 ATOH8Q96SQ7 321 aa10.68□□□□□ -0.7
APTX-230ENST00000494649 MACROD1Q9BQ69 325 aa10.68□□□□□ -0.7
APTX-230ENST00000494649 TWSG1Q9GZX9 223 aa10.68□□□□□ -0.7
APTX-230ENST00000494649 AKIRIN1Q9H9L7 192 aaPredicted RBP10.68□□□□□ -0.7
APTX-230ENST00000494649 FBXO8Q9NRD0 319 aa10.68□□□□□ -0.7
APTX-230ENST00000494649 XPR1Q9UBH6 696 aa10.68□□□□□ -0.7
APTX-230ENST00000494649 ZMIZ1Q9ULJ6 1067 aa10.68□□□□□ -0.7
APTX-230ENST00000494649 NOVA2Q9UNW9 492 aaKnown RBP10.68□□□□□ -0.7
APTX-230ENST00000494649 PCM1Q15154 2024 aa10.67□□□□□ -0.7
APTX-230ENST00000494649 HAT1O14929 419 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms