RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 TIMMDC1Q9NPL8 285 aa13.39□□□□□ -0.27
VCP-207ENST00000493886 FAM8A1Q9UBU6 413 aa13.39□□□□□ -0.27
VCP-207ENST00000493886 ITGB1BP2Q9UKP3 347 aa13.39□□□□□ -0.27
VCP-207ENST00000493886 ESRRGP62508 458 aa13.39□□□□□ -0.27
VCP-207ENST00000493886 ACOX1Q15067 660 aa13.39□□□□□ -0.27
VCP-207ENST00000493886 GGTA1PQ4G0N0 100 aa13.39□□□□□ -0.27
VCP-207ENST00000493886 LDLRAP1Q5SW96 308 aa13.39□□□□□ -0.27
VCP-207ENST00000493886 CACHD1Q5VU97 1274 aa13.39□□□□□ -0.27
VCP-207ENST00000493886 NEK5Q6P3R8 708 aa13.39□□□□□ -0.27
VCP-207ENST00000493886 PRR23BQ6ZRT6 265 aa13.39□□□□□ -0.27
VCP-207ENST00000493886 ERI1Q8IV48 349 aaKnown RBP13.39□□□□□ -0.27
VCP-207ENST00000493886 RAVER1Q8IY67 606 aaKnown RBP13.39□□□□□ -0.27
VCP-207ENST00000493886 GLYATL1Q969I3 302 aa13.39□□□□□ -0.27
VCP-207ENST00000493886 NXPE3Q969Y0 559 aa13.39□□□□□ -0.27
VCP-207ENST00000493886 ZFYVE19Q96K21 471 aa13.39□□□□□ -0.27
VCP-207ENST00000493886 ACPTQ9BZG2 426 aa13.39□□□□□ -0.27
VCP-207ENST00000493886 POLR1BQ9H9Y6 1135 aa13.39□□□□□ -0.27
VCP-207ENST00000493886 C1orf109Q9NX04 203 aa13.39□□□□□ -0.27
VCP-207ENST00000493886 A0A087WXM4 84 aa13.38□□□□□ -0.27
VCP-207ENST00000493886 TMEM202A6NGA9 273 aa13.38□□□□□ -0.27
VCP-207ENST00000493886 GRXCR1A8MXD5 290 aa13.38□□□□□ -0.27
VCP-207ENST00000493886 PRRT4C9JH25 899 aa13.38□□□□□ -0.27
VCP-207ENST00000493886 QSOX1O00391 747 aa13.38□□□□□ -0.27
VCP-207ENST00000493886 SLCO2B1O94956 709 aa13.38□□□□□ -0.27
VCP-207ENST00000493886 PDYNP01213 254 aa13.38□□□□□ -0.27
VCP-207ENST00000493886 TFPTP0C1Z6 253 aa13.38□□□□□ -0.27
VCP-207ENST00000493886 CTSCP53634 463 aa13.38□□□□□ -0.27
VCP-207ENST00000493886 OR4D2P58180 307 aa13.38□□□□□ -0.27
VCP-207ENST00000493886 PMS2P3Q13401 168 aa13.38□□□□□ -0.27
VCP-207ENST00000493886 C16orf72Q14CZ0 275 aa13.38□□□□□ -0.27
VCP-207ENST00000493886 PDE12Q6L8Q7 609 aaKnown RBP13.38□□□□□ -0.27
VCP-207ENST00000493886 TBPL2Q6SJ96 375 aa13.38□□□□□ -0.27
VCP-207ENST00000493886 ETFBKMTQ8IXQ9 262 aa13.38□□□□□ -0.27
VCP-207ENST00000493886 SELENOMQ8WWX9 145 aa13.38□□□□□ -0.27
VCP-207ENST00000493886 AP2M1Q96CW1 435 aa13.38□□□□□ -0.27
VCP-207ENST00000493886 VPS35Q96QK1 796 aa13.38□□□□□ -0.27
VCP-207ENST00000493886 C9orf16Q9BUW7 83 aa13.38□□□□□ -0.27
VCP-207ENST00000493886 DPY30Q9C005 99 aa13.38□□□□□ -0.27
VCP-207ENST00000493886 ASIC5Q9NY37 505 aa13.38□□□□□ -0.27
VCP-207ENST00000493886 CIDEBQ9UHD4 219 aa13.38□□□□□ -0.27
VCP-207ENST00000493886 SLC22A14Q9Y267 594 aa13.38□□□□□ -0.27
VCP-207ENST00000493886 KCNE1BA0A087WTH5 132 aa13.38□□□□□ -0.27
VCP-207ENST00000493886 ACOX3O15254 700 aa13.38□□□□□ -0.27
VCP-207ENST00000493886 SLC6A11P48066 632 aa13.38□□□□□ -0.27
VCP-207ENST00000493886 PPP1R8Q12972 351 aaKnown RBP13.38□□□□□ -0.27
VCP-207ENST00000493886 GPM6BQ13491 265 aa13.38□□□□□ -0.27
VCP-207ENST00000493886 SELPLGQ14242 412 aa13.38□□□□□ -0.27
VCP-207ENST00000493886 ATP6AP1Q15904 470 aa13.38□□□□□ -0.27
VCP-207ENST00000493886 ANKDD1AQ495B1 522 aa13.38□□□□□ -0.27
VCP-207ENST00000493886 KLHL35Q6PF15 583 aa13.38□□□□□ -0.27
VCP-207ENST00000493886 TMEM26Q6ZUK4 368 aa13.38□□□□□ -0.27
VCP-207ENST00000493886 RASGRP3Q8IV61 690 aa13.38□□□□□ -0.27
VCP-207ENST00000493886 KIAA1958Q8N8K9 716 aa13.38□□□□□ -0.27
VCP-207ENST00000493886 RASGEF1AQ8N9B8 481 aa13.38□□□□□ -0.27
VCP-207ENST00000493886 TRPV3Q8NET8 790 aa13.38□□□□□ -0.27
VCP-207ENST00000493886 HM13Q8TCT9 377 aa13.38□□□□□ -0.27
VCP-207ENST00000493886 BPIFB1Q8TDL5 484 aa13.38□□□□□ -0.27
VCP-207ENST00000493886 CGREF1Q99674 301 aa13.38□□□□□ -0.27
VCP-207ENST00000493886 ATG10Q9H0Y0 220 aa13.38□□□□□ -0.27
VCP-207ENST00000493886 LTB4R2Q9NPC1 389 aa13.38□□□□□ -0.27
VCP-207ENST00000493886 DNAJC11Q9NVH1 559 aa13.38□□□□□ -0.27
VCP-207ENST00000493886 SNX6Q9UNH7 406 aa13.38□□□□□ -0.27
VCP-207ENST00000493886 TSPAN6O43657 245 aa13.37□□□□□ -0.27
VCP-207ENST00000493886 ATE1O95260 518 aa13.37□□□□□ -0.27
VCP-207ENST00000493886 CA3P07451 260 aa13.37□□□□□ -0.27
VCP-207ENST00000493886 GLULP15104 373 aa13.37□□□□□ -0.27
VCP-207ENST00000493886 MYF6P23409 242 aa13.37□□□□□ -0.27
VCP-207ENST00000493886 ITPKAP23677 461 aa13.37□□□□□ -0.27
VCP-207ENST00000493886 EEF1B2P24534 225 aaKnown RBP13.37□□□□□ -0.27
VCP-207ENST00000493886 HTR1EP28566 365 aa13.37□□□□□ -0.27
VCP-207ENST00000493886 METAP1P53582 386 aa13.37□□□□□ -0.27
VCP-207ENST00000493886 PWP1Q13610 501 aa13.37□□□□□ -0.27
VCP-207ENST00000493886 COL19A1Q14993 1142 aa13.37□□□□□ -0.27
VCP-207ENST00000493886 SLC36A3Q495N2 470 aa13.37□□□□□ -0.27
VCP-207ENST00000493886 FAM78AQ5JUQ0 283 aa13.37□□□□□ -0.27
VCP-207ENST00000493886 INTS11Q5TA45 600 aaKnown RBP13.37□□□□□ -0.27
VCP-207ENST00000493886 SUSD1Q6UWL2 747 aa13.37□□□□□ -0.27
VCP-207ENST00000493886 GALNT13Q8IUC8 556 aa13.37□□□□□ -0.27
VCP-207ENST00000493886 FAM20CQ8IXL6 584 aa13.37□□□□□ -0.27
VCP-207ENST00000493886 L3MBTL4Q8NA19 623 aa13.37□□□□□ -0.27
VCP-207ENST00000493886 GLB1L3Q8NCI6 653 aaPredicted RBP13.37□□□□□ -0.27
VCP-207ENST00000493886 SLC13A3Q8WWT9 602 aa13.37□□□□□ -0.27
VCP-207ENST00000493886 WRAP53Q9BUR4 548 aaKnown RBP13.37□□□□□ -0.27
VCP-207ENST00000493886 ELOVL6Q9H5J4 265 aa13.37□□□□□ -0.27
VCP-207ENST00000493886 ANAPC2Q9UJX6 822 aa13.37□□□□□ -0.27
VCP-207ENST00000493886 A0A1W2PPW3 197 aa13.37□□□□□ -0.27
VCP-207ENST00000493886 WNT9AO14904 365 aa13.37□□□□□ -0.27
VCP-207ENST00000493886 PRNPP04156 253 aa13.37□□□□□ -0.27
VCP-207ENST00000493886 GSTM1P09488 218 aa13.37□□□□□ -0.27
VCP-207ENST00000493886 HLA-EP13747 358 aa13.37□□□□□ -0.27
VCP-207ENST00000493886 ELK4P28324 431 aa13.37□□□□□ -0.27
VCP-207ENST00000493886 ABRQ12979 859 aa13.37□□□□□ -0.27
VCP-207ENST00000493886 FAM174BQ3ZCQ3 159 aa13.37□□□□□ -0.27
VCP-207ENST00000493886 SYTL3Q4VX76 610 aa13.37□□□□□ -0.27
VCP-207ENST00000493886 NRSN1Q8IZ57 195 aa13.37□□□□□ -0.27
VCP-207ENST00000493886 MFSD2AQ8NA29 543 aa13.37□□□□□ -0.27
VCP-207ENST00000493886 FBXL8Q96CD0 374 aa13.37□□□□□ -0.27
VCP-207ENST00000493886 FAM83CQ9BQN1 747 aa13.37□□□□□ -0.27
VCP-207ENST00000493886 CXorf21Q9HAI6 301 aa13.37□□□□□ -0.27
VCP-207ENST00000493886 OTOL1A6NHN0 477 aaPredicted RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms