RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 ZSCAN1Q8NBB4 408 aa11.17□□□□□ -0.62
CTSA-209ENST00000493522 FLVCR1-AS1Q8TAF5 88 aa11.17□□□□□ -0.62
CTSA-209ENST00000493522 HMGCLL1Q8TB92 370 aa11.17□□□□□ -0.62
CTSA-209ENST00000493522 ZNF480Q8WV37 535 aa11.17□□□□□ -0.62
CTSA-209ENST00000493522 KLHL6Q8WZ60 621 aa11.17□□□□□ -0.62
CTSA-209ENST00000493522 SMPDL3AQ92484 453 aa11.17□□□□□ -0.62
CTSA-209ENST00000493522 EXTL1Q92935 676 aa11.17□□□□□ -0.62
CTSA-209ENST00000493522 EXT2Q93063 718 aa11.17□□□□□ -0.62
CTSA-209ENST00000493522 SLC22A18Q96BI1 424 aa11.17□□□□□ -0.62
CTSA-209ENST00000493522 ALKBH8Q96BT7 664 aaKnown RBP11.17□□□□□ -0.62
CTSA-209ENST00000493522 CCDC138Q96M89 665 aa11.17□□□□□ -0.62
CTSA-209ENST00000493522 EGFL8Q99944 293 aa11.17□□□□□ -0.62
CTSA-209ENST00000493522 PITPNM3Q9BZ71 974 aa11.17□□□□□ -0.62
CTSA-209ENST00000493522 VPS11Q9H270 941 aa11.17□□□□□ -0.62
CTSA-209ENST00000493522 RRAGDQ9NQL2 400 aaPredicted RBP11.17□□□□□ -0.62
CTSA-209ENST00000493522 SIDT1Q9NXL6 827 aaKnown RBP11.17□□□□□ -0.62
CTSA-209ENST00000493522 SLC39A1Q9NY26 324 aa11.17□□□□□ -0.62
CTSA-209ENST00000493522 STOX2Q9P2F5 926 aaPredicted RBP11.17□□□□□ -0.62
CTSA-209ENST00000493522 PSMC3IPQ9P2W1 217 aaPredicted RBP11.17□□□□□ -0.62
CTSA-209ENST00000493522 IL17BQ9UHF5 180 aa11.17□□□□□ -0.62
CTSA-209ENST00000493522 TLK1Q9UKI8 766 aa11.17□□□□□ -0.62
CTSA-209ENST00000493522 ACOT9Q9Y305 439 aa11.17□□□□□ -0.62
CTSA-209ENST00000493522 FER1L5A0AVI2 2057 aa11.16□□□□□ -0.62
CTSA-209ENST00000493522 A0A096LPK6 155 aa11.16□□□□□ -0.62
CTSA-209ENST00000493522 IQANK1A0A1B0GTG1 560 aa11.16□□□□□ -0.62
CTSA-209ENST00000493522 B4E171 279 aa11.16□□□□□ -0.62
CTSA-209ENST00000493522 ALDOAP04075 364 aaKnown RBP11.16□□□□□ -0.62
CTSA-209ENST00000493522 SHBGP04278 402 aa11.16□□□□□ -0.62
CTSA-209ENST00000493522 C2P06681 752 aa11.16□□□□□ -0.62
CTSA-209ENST00000493522 SNRPAP09012 282 aaKnown RBP11.16□□□□□ -0.62
CTSA-209ENST00000493522 LTA4HP09960 611 aaKnown RBP11.16□□□□□ -0.62
CTSA-209ENST00000493522 FGF3P11487 239 aaPredicted RBP11.16□□□□□ -0.62
CTSA-209ENST00000493522 CD1DP15813 335 aa11.16□□□□□ -0.62
CTSA-209ENST00000493522 MAGP20916 626 aa11.16□□□□□ -0.62
CTSA-209ENST00000493522 GCAP28676 217 aa11.16□□□□□ -0.62
CTSA-209ENST00000493522 TSPAN7P41732 249 aa11.16□□□□□ -0.62
CTSA-209ENST00000493522 SLCO1A2P46721 670 aa11.16□□□□□ -0.62
CTSA-209ENST00000493522 RAB15P59190 212 aa11.16□□□□□ -0.62
CTSA-209ENST00000493522 SH3BP2P78314 561 aa11.16□□□□□ -0.62
CTSA-209ENST00000493522 HSD11B2P80365 405 aa11.16□□□□□ -0.62
CTSA-209ENST00000493522 TUBB3Q13509 450 aa11.16□□□□□ -0.62
CTSA-209ENST00000493522 TGIF1Q15583 401 aa11.16□□□□□ -0.62
CTSA-209ENST00000493522 SF1Q15637 639 aaKnown RBP11.16□□□□□ -0.62
CTSA-209ENST00000493522 PPP1R3AQ16821 1122 aa11.16□□□□□ -0.62
CTSA-209ENST00000493522 LINC00303Q3SY05 128 aa11.16□□□□□ -0.62
CTSA-209ENST00000493522 TMTC4Q5T4D3 741 aa11.16□□□□□ -0.62
CTSA-209ENST00000493522 LGSNQ5TDP6 509 aa11.16□□□□□ -0.62
CTSA-209ENST00000493522 AGTRAPQ6RW13 159 aa11.16□□□□□ -0.62
CTSA-209ENST00000493522 ATG14Q6ZNE5 492 aa11.16□□□□□ -0.62
CTSA-209ENST00000493522 CCDC91Q7Z6B0 441 aa11.16□□□□□ -0.62
CTSA-209ENST00000493522 C19orf47Q8N9M1 422 aaKnown RBP11.16□□□□□ -0.62
CTSA-209ENST00000493522 KCTD4Q8WVF5 259 aa11.16□□□□□ -0.62
CTSA-209ENST00000493522 ANKRD7Q92527 254 aa11.16□□□□□ -0.62
CTSA-209ENST00000493522 CAVIN3Q969G5 261 aa11.16□□□□□ -0.62
CTSA-209ENST00000493522 PMEPA1Q969W9 287 aa11.16□□□□□ -0.62
CTSA-209ENST00000493522 SLC41A2Q96JW4 573 aa11.16□□□□□ -0.62
CTSA-209ENST00000493522 TRAPPC9Q96Q05 1148 aa11.16□□□□□ -0.62
CTSA-209ENST00000493522 OR6C1Q96RD1 312 aa11.16□□□□□ -0.62
CTSA-209ENST00000493522 MIPEPQ99797 713 aa11.16□□□□□ -0.62
CTSA-209ENST00000493522 CTRCQ99895 268 aa11.16□□□□□ -0.62
CTSA-209ENST00000493522 DHRS4Q9BTZ2 278 aa11.16□□□□□ -0.62
CTSA-209ENST00000493522 ACAT2Q9BWD1 397 aa11.16□□□□□ -0.62
CTSA-209ENST00000493522 TRIM4Q9C037 500 aa11.16□□□□□ -0.62
CTSA-209ENST00000493522 FANCEQ9HB96 536 aa11.16□□□□□ -0.62
CTSA-209ENST00000493522 CCDC177Q9NQR7 707 aaPredicted RBP11.16□□□□□ -0.62
CTSA-209ENST00000493522 STARD5Q9NSY2 213 aa11.16□□□□□ -0.62
CTSA-209ENST00000493522 INTS7Q9NVH2 962 aaKnown RBP11.16□□□□□ -0.62
CTSA-209ENST00000493522 SEMA5BQ9P283 1151 aa11.16□□□□□ -0.62
CTSA-209ENST00000493522 FETUBQ9UGM5 382 aa11.16□□□□□ -0.62
CTSA-209ENST00000493522 TBK1Q9UHD2 729 aa11.16□□□□□ -0.62
CTSA-209ENST00000493522 TAC3Q9UHF0 121 aa11.16□□□□□ -0.62
CTSA-209ENST00000493522 RAB21Q9UL25 225 aa11.16□□□□□ -0.62
CTSA-209ENST00000493522 NOVA2Q9UNW9 492 aaKnown RBP11.16□□□□□ -0.62
CTSA-209ENST00000493522 BTRCQ9Y297 605 aa11.16□□□□□ -0.62
CTSA-209ENST00000493522 OARD1Q9Y530 152 aa11.16□□□□□ -0.62
CTSA-209ENST00000493522 PCDHB11Q9Y5F2 797 aa11.16□□□□□ -0.62
CTSA-209ENST00000493522 RELNP78509 3460 aa11.15□□□□□ -0.62
CTSA-209ENST00000493522 A0A1W2PPV9 198 aa11.15□□□□□ -0.62
CTSA-209ENST00000493522 NCF1BA6NI72 391 aaPredicted RBP11.15□□□□□ -0.62
CTSA-209ENST00000493522 CYSRT1A8MQ03 144 aa11.15□□□□□ -0.62
CTSA-209ENST00000493522 NCF1CA8MVU1 366 aaPredicted RBP11.15□□□□□ -0.62
CTSA-209ENST00000493522 E7ENX8 843 aa11.15□□□□□ -0.62
CTSA-209ENST00000493522 PRAMEF10O60809 474 aa11.15□□□□□ -0.62
CTSA-209ENST00000493522 CCNDBP1O95273 360 aa11.15□□□□□ -0.62
CTSA-209ENST00000493522 FKBP9O95302 570 aa11.15□□□□□ -0.62
CTSA-209ENST00000493522 S100BP04271 92 aaPredicted RBP11.15□□□□□ -0.62
CTSA-209ENST00000493522 TUBBP07437 444 aa11.15□□□□□ -0.62
CTSA-209ENST00000493522 NCF1P14598 390 aaPredicted RBP11.15□□□□□ -0.62
CTSA-209ENST00000493522 TFEBP19484 476 aa11.15□□□□□ -0.62
CTSA-209ENST00000493522 CD82P27701 267 aa11.15□□□□□ -0.62
CTSA-209ENST00000493522 CMPK1P30085 196 aa11.15□□□□□ -0.62
CTSA-209ENST00000493522 MAGEA12P43365 314 aa11.15□□□□□ -0.62
CTSA-209ENST00000493522 GLRBP48167 497 aa11.15□□□□□ -0.62
CTSA-209ENST00000493522 TAP2Q03519 686 aa11.15□□□□□ -0.62
CTSA-209ENST00000493522 DLG1Q12959 904 aa11.15□□□□□ -0.62
CTSA-209ENST00000493522 OR4D1Q15615 310 aa11.15□□□□□ -0.62
CTSA-209ENST00000493522 GPR19Q15760 415 aa11.15□□□□□ -0.62
CTSA-209ENST00000493522 DEFB110Q30KQ9 67 aa11.15□□□□□ -0.62
CTSA-209ENST00000493522 TMEM164Q5U3C3 297 aa11.15□□□□□ -0.62
CTSA-209ENST00000493522 PRAMEF13Q5VWM6 474 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms